RNA–Protein interactions for RNA: ENST00000472119.1

SCN9A-206, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 2

Gene SCN9A, Length 905 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-206ENST00000472119 HYLS1Q96M11 299 aa4.91□□□□□ -1.62
SCN9A-206ENST00000472119 PAXXQ9BUH6 204 aa4.91□□□□□ -1.62
SCN9A-206ENST00000472119 ZNF471Q9BX82 626 aaPredicted RBP4.91□□□□□ -1.62
SCN9A-206ENST00000472119 OR51M1Q9H341 326 aa4.91□□□□□ -1.62
SCN9A-206ENST00000472119 HRH4Q9H3N8 390 aa4.91□□□□□ -1.62
SCN9A-206ENST00000472119 RETNQ9HD89 108 aa4.91□□□□□ -1.62
SCN9A-206ENST00000472119 RPRMQ9NS64 109 aa4.91□□□□□ -1.62
SCN9A-206ENST00000472119 TMEM14CQ9P0S9 112 aa4.91□□□□□ -1.62
SCN9A-206ENST00000472119 NBEAL2Q6ZNJ1 2754 aa4.91□□□□□ -1.62
SCN9A-206ENST00000472119 ZNF705FA8MVS1 300 aaPredicted RBP4.9□□□□□ -1.63
SCN9A-206ENST00000472119 H3BMM0 161 aa4.9□□□□□ -1.63
SCN9A-206ENST00000472119 OR7C2O60412 319 aa4.9□□□□□ -1.63
SCN9A-206ENST00000472119 ZNF705DP0CH99 300 aaPredicted RBP4.9□□□□□ -1.63
SCN9A-206ENST00000472119 ZNF705BP0CI00 300 aaPredicted RBP4.9□□□□□ -1.63
SCN9A-206ENST00000472119 HIST1H1EP10412 219 aaKnown RBP4.9□□□□□ -1.63
SCN9A-206ENST00000472119 SPP1P10451 314 aa4.9□□□□□ -1.63
SCN9A-206ENST00000472119 SERF2P84101 59 aa4.9□□□□□ -1.63
SCN9A-206ENST00000472119 PSG3Q16557 428 aa4.9□□□□□ -1.63
SCN9A-206ENST00000472119 TMEM41BQ5BJD5 291 aa4.9□□□□□ -1.63
SCN9A-206ENST00000472119 SAMD13Q5VXD3 122 aa4.9□□□□□ -1.63
SCN9A-206ENST00000472119 LCN15Q6UWW0 184 aa4.9□□□□□ -1.63
SCN9A-206ENST00000472119 TRPT1Q86TN4 253 aaKnown RBP4.9□□□□□ -1.63
SCN9A-206ENST00000472119 OR4B1Q8NGF8 309 aa4.9□□□□□ -1.63
SCN9A-206ENST00000472119 FXYD5Q96DB9 178 aa4.9□□□□□ -1.63
SCN9A-206ENST00000472119 SAT2Q96F10 170 aaPredicted RBP4.9□□□□□ -1.63
SCN9A-206ENST00000472119 SLC50A1Q9BRV3 221 aa4.9□□□□□ -1.63
SCN9A-206ENST00000472119 TM2D2Q9BX73 214 aa4.9□□□□□ -1.63
SCN9A-206ENST00000472119 CSTL1Q9H114 145 aa4.9□□□□□ -1.63
SCN9A-206ENST00000472119 ZNF331Q9NQX6 463 aaPredicted RBP4.9□□□□□ -1.63
SCN9A-206ENST00000472119 AGRNO00468 2067 aa4.89□□□□□ -1.63
SCN9A-206ENST00000472119 TRBV19A0A075B6N1 114 aa4.89□□□□□ -1.63
SCN9A-206ENST00000472119 A0A0J9YX75 114 aa4.89□□□□□ -1.63
SCN9A-206ENST00000472119 PRAC2D3DTV9 90 aa4.89□□□□□ -1.63
SCN9A-206ENST00000472119 SPRY2O43597 315 aa4.89□□□□□ -1.63
SCN9A-206ENST00000472119 NDUFB4O95168 129 aa4.89□□□□□ -1.63
SCN9A-206ENST00000472119 MBP02144 154 aa4.89□□□□□ -1.63
SCN9A-206ENST00000472119 NBEAP1P0C6P0 100 aa4.89□□□□□ -1.63
SCN9A-206ENST00000472119 HLA-DRB4P13762 266 aa4.89□□□□□ -1.63
SCN9A-206ENST00000472119 CDC34P49427 236 aaPredicted RBP4.89□□□□□ -1.63
SCN9A-206ENST00000472119 NKX2-5P52952 324 aaPredicted RBP4.89□□□□□ -1.63
SCN9A-206ENST00000472119 APOC4P55056 127 aa4.89□□□□□ -1.63
SCN9A-206ENST00000472119 FXYD7P58549 80 aa4.89□□□□□ -1.63
SCN9A-206ENST00000472119 TAS2R45P59539 299 aa4.89□□□□□ -1.63
SCN9A-206ENST00000472119 RANP62826 216 aaKnown RBP4.89□□□□□ -1.63
SCN9A-206ENST00000472119 GUK1Q16774 197 aa4.89□□□□□ -1.63
SCN9A-206ENST00000472119 ZFP69Q49AA0 526 aa4.89□□□□□ -1.63
SCN9A-206ENST00000472119 KHDC3LQ587J8 217 aa4.89□□□□□ -1.63
SCN9A-206ENST00000472119 AKR1C8PQ5T2L2 129 aa4.89□□□□□ -1.63
SCN9A-206ENST00000472119 EBLN2Q6P2I7 272 aa4.89□□□□□ -1.63
SCN9A-206ENST00000472119 FOXI2Q6ZQN5 318 aa4.89□□□□□ -1.63
SCN9A-206ENST00000472119 SSX7Q7RTT5 188 aa4.89□□□□□ -1.63
SCN9A-206ENST00000472119 EXOC3-AS1Q8N2X6 119 aa4.89□□□□□ -1.63
SCN9A-206ENST00000472119 ZNF738Q8NE65 137 aa4.89□□□□□ -1.63
SCN9A-206ENST00000472119 RPUSD4Q96CM3 377 aaKnown RBP4.89□□□□□ -1.63
SCN9A-206ENST00000472119 TM2D3Q9BRN9 247 aa4.89□□□□□ -1.63
SCN9A-206ENST00000472119 ACTR3CQ9C0K3 210 aaPredicted RBP4.89□□□□□ -1.63
SCN9A-206ENST00000472119 SAV1Q9H4B6 383 aaPredicted RBP4.89□□□□□ -1.63
SCN9A-206ENST00000472119 HLA-DRB4X5D2U9 266 aa4.89□□□□□ -1.63
SCN9A-206ENST00000472119 HUWE1Q7Z6Z7 4374 aaKnown RBP4.88□□□□□ -1.63
SCN9A-206ENST00000472119 COL7A1Q02388 2944 aa4.88□□□□□ -1.63
SCN9A-206ENST00000472119 KIR2DL5BA0A0G2JN68 375 aa4.88□□□□□ -1.63
SCN9A-206ENST00000472119 KIR2DL5BA0A0G2JPC4 375 aa4.88□□□□□ -1.63
SCN9A-206ENST00000472119 M0R3E3 92 aa4.88□□□□□ -1.63
SCN9A-206ENST00000472119 CA1P00915 261 aaPredicted RBP4.88□□□□□ -1.63
SCN9A-206ENST00000472119 GIG44P09565 113 aaPredicted RBP4.88□□□□□ -1.63
SCN9A-206ENST00000472119 STAG3L2P0CL84 134 aa4.88□□□□□ -1.63
SCN9A-206ENST00000472119 STAG3L3P0CL85 134 aa4.88□□□□□ -1.63
SCN9A-206ENST00000472119 ARL14EPLP0DKL9 152 aa4.88□□□□□ -1.63
SCN9A-206ENST00000472119 TPT1P13693 172 aaKnown RBP4.88□□□□□ -1.63
SCN9A-206ENST00000472119 C4BPBP20851 252 aa4.88□□□□□ -1.63
SCN9A-206ENST00000472119 FHITP49789 147 aa4.88□□□□□ -1.63
SCN9A-206ENST00000472119 CNN1P51911 297 aaKnown RBP4.88□□□□□ -1.63
SCN9A-206ENST00000472119 UBE2L3P68036 154 aaKnown RBP4.88□□□□□ -1.63
SCN9A-206ENST00000472119 PSG9Q00887 426 aa4.88□□□□□ -1.63
SCN9A-206ENST00000472119 HIST1H1AQ02539 215 aaPredicted RBP4.88□□□□□ -1.63
SCN9A-206ENST00000472119 PDE6HQ13956 83 aa4.88□□□□□ -1.63
SCN9A-206ENST00000472119 ZNF726P1Q15940 193 aa4.88□□□□□ -1.63
SCN9A-206ENST00000472119 DEFB135Q30KP9 77 aa4.88□□□□□ -1.63
SCN9A-206ENST00000472119 BAP18Q8IXM2 172 aa4.88□□□□□ -1.63
SCN9A-206ENST00000472119 KIR2DL5AQ8N109 375 aa4.88□□□□□ -1.63
SCN9A-206ENST00000472119 C9orf62Q8N4C0 152 aa4.88□□□□□ -1.63
SCN9A-206ENST00000472119 KIR2DL5BQ8NHK3 375 aa4.88□□□□□ -1.63
SCN9A-206ENST00000472119 TMED6Q8WW62 240 aa4.88□□□□□ -1.63
SCN9A-206ENST00000472119 PHYHIPLQ96FC7 376 aa4.88□□□□□ -1.63
SCN9A-206ENST00000472119 RCHY1Q96PM5 261 aa4.88□□□□□ -1.63
SCN9A-206ENST00000472119 CLEC5AQ9NY25 188 aa4.88□□□□□ -1.63
SCN9A-206ENST00000472119 U3KQK5 164 aa4.88□□□□□ -1.63
SCN9A-206ENST00000472119 CTXND1A0A1B0GTU2 59 aa4.87□□□□□ -1.63
SCN9A-206ENST00000472119 UBE2CO00762 179 aa4.87□□□□□ -1.63
SCN9A-206ENST00000472119 ZNF253O75346 499 aa4.87□□□□□ -1.63
SCN9A-206ENST00000472119 DUSP14O95147 198 aaKnown RBP4.87□□□□□ -1.63
SCN9A-206ENST00000472119 SEC11BP0C7V7 166 aa4.87□□□□□ -1.63
SCN9A-206ENST00000472119 GCHFRP30047 84 aa4.87□□□□□ -1.63
SCN9A-206ENST00000472119 FGF8P55075 233 aaPredicted RBP4.87□□□□□ -1.63
SCN9A-206ENST00000472119 ERVFC1-1P60608 527 aa4.87□□□□□ -1.63
SCN9A-206ENST00000472119 EIF5AP63241 154 aaKnown RBP4.87□□□□□ -1.63
SCN9A-206ENST00000472119 MORN3Q6PF18 240 aaPredicted RBP4.87□□□□□ -1.63
SCN9A-206ENST00000472119 PQLC2Q6ZP29 291 aa4.87□□□□□ -1.63
SCN9A-206ENST00000472119 IQCF2Q8IXL9 164 aa4.87□□□□□ -1.63
SCN9A-206ENST00000472119 OR8A1Q8NGG7 326 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms