RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 OR4E1P0C645 316 aa4.55□□□□□ -1.68
HDAC1-204ENST00000471488 CXCL2P19875 107 aa4.55□□□□□ -1.68
HDAC1-204ENST00000471488 VAMP1P23763 118 aa4.55□□□□□ -1.68
HDAC1-204ENST00000471488 VBP1P61758 197 aa4.55□□□□□ -1.68
HDAC1-204ENST00000471488 NCS1P62166 190 aa4.55□□□□□ -1.68
HDAC1-204ENST00000471488 SURF2Q15527 256 aaPredicted RBP4.55□□□□□ -1.68
HDAC1-204ENST00000471488 NDUFA5Q16718 116 aa4.55□□□□□ -1.68
HDAC1-204ENST00000471488 Q6ZQT7 251 aa4.55□□□□□ -1.68
HDAC1-204ENST00000471488 C9orf47Q6ZRZ4 202 aa4.55□□□□□ -1.68
HDAC1-204ENST00000471488 Q6ZSA8 131 aa4.55□□□□□ -1.68
HDAC1-204ENST00000471488 OR10P1Q8NGE3 313 aa4.55□□□□□ -1.68
HDAC1-204ENST00000471488 OR51S1Q8NGJ8 323 aa4.55□□□□□ -1.68
HDAC1-204ENST00000471488 CIRBP-AS1Q8TBR5 109 aa4.55□□□□□ -1.68
HDAC1-204ENST00000471488 LINC00477Q96M19 166 aa4.55□□□□□ -1.68
HDAC1-204ENST00000471488 CIB3Q96Q77 187 aaPredicted RBP4.55□□□□□ -1.68
HDAC1-204ENST00000471488 Q9H521 79 aa4.55□□□□□ -1.68
HDAC1-204ENST00000471488 GPR132Q9UNW8 380 aa4.55□□□□□ -1.68
HDAC1-204ENST00000471488 PXMP4Q9Y6I8 212 aa4.55□□□□□ -1.68
HDAC1-204ENST00000471488 IGHV1OR15-1A0A075B7D0 117 aa4.54□□□□□ -1.68
HDAC1-204ENST00000471488 AGPAT2O15120 278 aa4.54□□□□□ -1.68
HDAC1-204ENST00000471488 PFDN1O60925 122 aa4.54□□□□□ -1.68
HDAC1-204ENST00000471488 HOXB5P09067 269 aa4.54□□□□□ -1.68
HDAC1-204ENST00000471488 AKAIN1P0CW23 69 aa4.54□□□□□ -1.68
HDAC1-204ENST00000471488 HNRNPA3P51991 378 aaKnown RBP4.54□□□□□ -1.68
HDAC1-204ENST00000471488 SELENOTP62341 195 aa4.54□□□□□ -1.68
HDAC1-204ENST00000471488 SRPXP78539 464 aa4.54□□□□□ -1.68
HDAC1-204ENST00000471488 OPCMLQ14982 345 aa4.54□□□□□ -1.68
HDAC1-204ENST00000471488 ACOT6Q3I5F7 207 aaPredicted RBP4.54□□□□□ -1.68
HDAC1-204ENST00000471488 ANXA2RQ3ZCQ2 193 aa4.54□□□□□ -1.68
HDAC1-204ENST00000471488 ANKRD39Q53RE8 183 aa4.54□□□□□ -1.68
HDAC1-204ENST00000471488 PATE2Q6UY27 113 aa4.54□□□□□ -1.68
HDAC1-204ENST00000471488 OR4C5Q8NGB2 326 aa4.54□□□□□ -1.68
HDAC1-204ENST00000471488 RAB2BQ8WUD1 216 aa4.54□□□□□ -1.68
HDAC1-204ENST00000471488 TMEM37Q8WXS4 190 aa4.54□□□□□ -1.68
HDAC1-204ENST00000471488 PRRT1Q99946 306 aa4.54□□□□□ -1.68
HDAC1-204ENST00000471488 SOSTQ9BQB4 213 aa4.54□□□□□ -1.68
HDAC1-204ENST00000471488 PSENENQ9NZ42 101 aa4.54□□□□□ -1.68
HDAC1-204ENST00000471488 CCDC59Q9P031 241 aaKnown RBP4.54□□□□□ -1.68
HDAC1-204ENST00000471488 MGAT4CQ9UBM8 478 aa4.54□□□□□ -1.68
HDAC1-204ENST00000471488 NAGKQ9UJ70 344 aa4.54□□□□□ -1.68
HDAC1-204ENST00000471488 RNF24Q9Y225 148 aa4.54□□□□□ -1.68
HDAC1-204ENST00000471488 DNAH8Q96JB1 4490 aa4.53□□□□□ -1.68
HDAC1-204ENST00000471488 IGKV2-40A0A087WW87 121 aaPredicted RBP4.53□□□□□ -1.68
HDAC1-204ENST00000471488 PRSS46E5RG02 174 aa4.53□□□□□ -1.68
HDAC1-204ENST00000471488 H3BQ15 152 aa4.53□□□□□ -1.68
HDAC1-204ENST00000471488 M0R3E3 92 aa4.53□□□□□ -1.68
HDAC1-204ENST00000471488 SSSCA1O60232 199 aa4.53□□□□□ -1.68
HDAC1-204ENST00000471488 ATP6V1G2O95670 118 aa4.53□□□□□ -1.68
HDAC1-204ENST00000471488 SCGB1D2O95969 90 aa4.53□□□□□ -1.68
HDAC1-204ENST00000471488 IGKV2D-40P01614 121 aaPredicted RBP4.53□□□□□ -1.68
HDAC1-204ENST00000471488 KRTAP10-4P60372 401 aaPredicted RBP4.53□□□□□ -1.68
HDAC1-204ENST00000471488 TMEM183BQ1AE95 376 aa4.53□□□□□ -1.68
HDAC1-204ENST00000471488 LINC01556Q5JQF7 62 aa4.53□□□□□ -1.68
HDAC1-204ENST00000471488 IBA57Q5T440 356 aaKnown RBP4.53□□□□□ -1.68
HDAC1-204ENST00000471488 TMEM78Q5T7P6 136 aa4.53□□□□□ -1.68
HDAC1-204ENST00000471488 MORN5Q5VZ52 161 aa4.53□□□□□ -1.68
HDAC1-204ENST00000471488 C10orf113Q5VZT2 155 aa4.53□□□□□ -1.68
HDAC1-204ENST00000471488 FAM122CQ6P4D5 195 aa4.53□□□□□ -1.68
HDAC1-204ENST00000471488 TMEM183AQ8IXX5 376 aa4.53□□□□□ -1.68
HDAC1-204ENST00000471488 Q8N3U1 123 aa4.53□□□□□ -1.68
HDAC1-204ENST00000471488 SCGB3A2Q96PL1 93 aa4.53□□□□□ -1.68
HDAC1-204ENST00000471488 ODF3Q96PU9 254 aa4.53□□□□□ -1.68
HDAC1-204ENST00000471488 SCP2D1Q9UJQ7 156 aa4.53□□□□□ -1.68
HDAC1-204ENST00000471488 TIMM9Q9Y5J7 89 aa4.53□□□□□ -1.68
HDAC1-204ENST00000471488 IGKV2D-24A0A075B6R9 120 aa4.52□□□□□ -1.69
HDAC1-204ENST00000471488 IGHV3-73A0A0B4J1V6 119 aa4.52□□□□□ -1.69
HDAC1-204ENST00000471488 MRPS12O15235 138 aaKnown RBP4.52□□□□□ -1.69
HDAC1-204ENST00000471488 METTL15P1P0C7V9 234 aa4.52□□□□□ -1.69
HDAC1-204ENST00000471488 POLR2GP62487 172 aaKnown RBP eCLIP4.52□□□□□ -1.69
HDAC1-204ENST00000471488 IL18Q14116 193 aa4.52□□□□□ -1.69
HDAC1-204ENST00000471488 ZNF846Q147U1 533 aa4.52□□□□□ -1.69
HDAC1-204ENST00000471488 PRR9Q5T870 116 aa4.52□□□□□ -1.69
HDAC1-204ENST00000471488 ZNF546Q86UE3 836 aa4.52□□□□□ -1.69
HDAC1-204ENST00000471488 EXOC3-AS1Q8N2X6 119 aa4.52□□□□□ -1.69
HDAC1-204ENST00000471488 C15orf40Q8WUR7 153 aa4.52□□□□□ -1.69
HDAC1-204ENST00000471488 AP3S1Q92572 193 aa4.52□□□□□ -1.69
HDAC1-204ENST00000471488 YIPF6Q96EC8 236 aa4.52□□□□□ -1.69
HDAC1-204ENST00000471488 DAZAP1Q96EP5 407 aaKnown RBP4.52□□□□□ -1.69
HDAC1-204ENST00000471488 SRRQ9GZT4 340 aa4.52□□□□□ -1.69
HDAC1-204ENST00000471488 AGPAT4-IT1Q9H0P7 198 aa4.52□□□□□ -1.69
HDAC1-204ENST00000471488 RPH3ALQ9UNE2 315 aa4.52□□□□□ -1.69
HDAC1-204ENST00000471488 TRAV8-3A0A0A6YYJ7 113 aa4.51□□□□□ -1.69
HDAC1-204ENST00000471488 FABP12A6NFH5 140 aa4.51□□□□□ -1.69
HDAC1-204ENST00000471488 A6NJY4 79 aa4.51□□□□□ -1.69
HDAC1-204ENST00000471488 KLLNB2CW77 178 aa4.51□□□□□ -1.69
HDAC1-204ENST00000471488 PITX3O75364 302 aa4.51□□□□□ -1.69
HDAC1-204ENST00000471488 GAS8-AS1O95177 125 aa4.51□□□□□ -1.69
HDAC1-204ENST00000471488 IGLC2P0DOY2 106 aa4.51□□□□□ -1.69
HDAC1-204ENST00000471488 HIST1H1EP10412 219 aaKnown RBP4.51□□□□□ -1.69
HDAC1-204ENST00000471488 PLP1P60201 277 aa4.51□□□□□ -1.69
HDAC1-204ENST00000471488 ODF1Q14990 250 aa4.51□□□□□ -1.69
HDAC1-204ENST00000471488 SH2D6Q7Z4S9 175 aa4.51□□□□□ -1.69
HDAC1-204ENST00000471488 SLC51BQ86UW2 128 aa4.51□□□□□ -1.69
HDAC1-204ENST00000471488 OR10G4Q8NGN3 311 aa4.51□□□□□ -1.69
HDAC1-204ENST00000471488 ATP6V0E2Q8NHE4 81 aa4.51□□□□□ -1.69
HDAC1-204ENST00000471488 Q8TAT8 98 aa4.51□□□□□ -1.69
HDAC1-204ENST00000471488 NPVFQ9HCQ7 196 aa4.51□□□□□ -1.69
HDAC1-204ENST00000471488 TMA7Q9Y2S6 64 aaKnown RBP4.51□□□□□ -1.69
HDAC1-204ENST00000471488 BOLA1Q9Y3E2 137 aa4.51□□□□□ -1.69
HDAC1-204ENST00000471488 TRAV4A0A0B4J268 109 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms