RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, human

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VARS-222	ENST00000470953	PET100	P0DJ07	73 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	SCGB1A1	P11684	91 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	HLA-DRB4	P13762	266 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	RPL7	P18124	248 aa	Known RBP	4.18	□□□□□ -1.74
VARS-222	ENST00000470953	GATA2	P23769	480 aa	Predicted RBP	4.18	□□□□□ -1.74
VARS-222	ENST00000470953	HAMP	P81172	84 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	ID3	Q02535	119 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	BAX	Q07812	192 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	LRRC37A5P	Q49AS3	106 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	FAM74A3	Q4VXF1	159 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	FOXI2	Q6ZQN5	318 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	TRPT1	Q86TN4	253 aa	Known RBP	4.18	□□□□□ -1.74
VARS-222	ENST00000470953	HSD17B11	Q8NBQ5	300 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	ZNF738	Q8NE65	137 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	NUDT11	Q96G61	164 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	C2orf50	Q96LR7	162 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	CLUHP3	Q96NS8	147 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	TMEM208	Q9BTX3	173 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	RSG1	Q9BU20	258 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	ARL6	Q9H0F7	186 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	SLC25A32	Q9H2D1	315 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	NPVF	Q9HCQ7	196 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	RPRM	Q9NS64	109 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	UQCC1	Q9NVA1	299 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	CLEC5A	Q9NY25	188 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	TBC1D24	Q9ULP9	559 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	HLA-DRB4	X5D2U9	266 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	IGKV1OR2-108	A0A075B7D4	117 aa		4.17	□□□□□ -1.74
VARS-222	ENST00000470953	C7orf66	A4D0T2	115 aa		4.17	□□□□□ -1.74
VARS-222	ENST00000470953	PRSS46	E5RG02	174 aa		4.17	□□□□□ -1.74
VARS-222	ENST00000470953	FNDC10	F2Z333	226 aa		4.17	□□□□□ -1.74
VARS-222	ENST00000470953		H3BRN7	92 aa		4.17	□□□□□ -1.74
VARS-222	ENST00000470953	AGPAT2	O15120	278 aa		4.17	□□□□□ -1.74
VARS-222	ENST00000470953	AMBP	P02760	352 aa		4.17	□□□□□ -1.74
VARS-222	ENST00000470953	MIF	P14174	115 aa		4.17	□□□□□ -1.74
VARS-222	ENST00000470953	ZNF25	P17030	456 aa	Predicted RBP	4.17	□□□□□ -1.74
VARS-222	ENST00000470953	FGF7	P21781	194 aa		4.17	□□□□□ -1.74
VARS-222	ENST00000470953	CAMLG	P49069	296 aa		4.17	□□□□□ -1.74
VARS-222	ENST00000470953	FXYD7	P58549	80 aa		4.17	□□□□□ -1.74
VARS-222	ENST00000470953	SNRPE	P62304	92 aa	Known RBP	4.17	□□□□□ -1.74
VARS-222	ENST00000470953	SPATA31B1P	Q5VZV4	182 aa		4.17	□□□□□ -1.74
VARS-222	ENST00000470953	TMEM14EP	Q6UXP3	125 aa		4.17	□□□□□ -1.74
VARS-222	ENST00000470953		Q6ZRG5	221 aa		4.17	□□□□□ -1.74
VARS-222	ENST00000470953	NRARP	Q7Z6K4	114 aa		4.17	□□□□□ -1.74
VARS-222	ENST00000470953	C15orf54	Q8N8G6	183 aa		4.17	□□□□□ -1.74
VARS-222	ENST00000470953	UHRF2	Q96PU4	802 aa		4.17	□□□□□ -1.74
VARS-222	ENST00000470953	SHANK2-AS3	Q9BTD1	123 aa		4.17	□□□□□ -1.74
VARS-222	ENST00000470953	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	4.17	□□□□□ -1.74
VARS-222	ENST00000470953	KCNIP2	Q9NS61	270 aa		4.17	□□□□□ -1.74
VARS-222	ENST00000470953	XCL2	Q9UBD3	114 aa		4.17	□□□□□ -1.74
VARS-222	ENST00000470953	TRAV10	A0A0B4J240	114 aa		4.16	□□□□□ -1.74
VARS-222	ENST00000470953	IGHV4-28	A0A0C4DH34	117 aa		4.16	□□□□□ -1.74
VARS-222	ENST00000470953		A0A1B0GV72	72 aa		4.16	□□□□□ -1.74
VARS-222	ENST00000470953	FAM24A	A6NFZ4	105 aa		4.16	□□□□□ -1.74
VARS-222	ENST00000470953	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.16	□□□□□ -1.74
VARS-222	ENST00000470953	INMT-MINDY4	F8WBC2	141 aa		4.16	□□□□□ -1.74
VARS-222	ENST00000470953		H3BMM0	161 aa		4.16	□□□□□ -1.74
VARS-222	ENST00000470953		M0R143	59 aa		4.16	□□□□□ -1.74
VARS-222	ENST00000470953	DUSP14	O95147	198 aa	Known RBP	4.16	□□□□□ -1.74
VARS-222	ENST00000470953	OXT	P01178	125 aa		4.16	□□□□□ -1.74
VARS-222	ENST00000470953	INS	P01308	110 aa		4.16	□□□□□ -1.74
VARS-222	ENST00000470953	APOC3	P02656	99 aa		4.16	□□□□□ -1.74
VARS-222	ENST00000470953	SULT1A1	P50225	295 aa		4.16	□□□□□ -1.74
VARS-222	ENST00000470953	EMP1	P54849	157 aa		4.16	□□□□□ -1.74
VARS-222	ENST00000470953	RHOB	P62745	196 aa		4.16	□□□□□ -1.74
VARS-222	ENST00000470953	CYCS	P99999	105 aa	Known RBP	4.16	□□□□□ -1.74
VARS-222	ENST00000470953	HIST1H1A	Q02539	215 aa	Predicted RBP	4.16	□□□□□ -1.74
VARS-222	ENST00000470953	SLA	Q13239	276 aa		4.16	□□□□□ -1.74
VARS-222	ENST00000470953	RAB32	Q13637	225 aa		4.16	□□□□□ -1.74
VARS-222	ENST00000470953	C10orf91	Q5T1B1	145 aa		4.16	□□□□□ -1.74
VARS-222	ENST00000470953	C10orf113	Q5VZT2	155 aa		4.16	□□□□□ -1.74
VARS-222	ENST00000470953	LINC00305	Q7Z4B0	112 aa		4.16	□□□□□ -1.74
VARS-222	ENST00000470953	BPIFA4P	Q86YQ2	179 aa		4.16	□□□□□ -1.74
VARS-222	ENST00000470953	ZNF709	Q8N972	641 aa		4.16	□□□□□ -1.74
VARS-222	ENST00000470953		Q8NAQ8	132 aa		4.16	□□□□□ -1.74
VARS-222	ENST00000470953	OR1L4	Q8NGR5	311 aa		4.16	□□□□□ -1.74
VARS-222	ENST00000470953	DEFB104A	Q8WTQ1	72 aa		4.16	□□□□□ -1.74
VARS-222	ENST00000470953	PACRG	Q96M98	296 aa	Predicted RBP	4.16	□□□□□ -1.74
VARS-222	ENST00000470953	MARVELD1	Q9BSK0	173 aa		4.16	□□□□□ -1.74
VARS-222	ENST00000470953	SLC25A31	Q9H0C2	315 aa		4.16	□□□□□ -1.74
VARS-222	ENST00000470953	ARV1	Q9H2C2	271 aa		4.16	□□□□□ -1.74
VARS-222	ENST00000470953	HRH4	Q9H3N8	390 aa		4.16	□□□□□ -1.74
VARS-222	ENST00000470953	LYRM2	Q9NU23	88 aa	Predicted RBP	4.16	□□□□□ -1.74
VARS-222	ENST00000470953	CARHSP1	Q9Y2V2	147 aa	Known RBP	4.16	□□□□□ -1.74
VARS-222	ENST00000470953	LPA	P08519	4548 aa		4.16	□□□□□ -1.74
VARS-222	ENST00000470953		E5RGE8	158 aa		4.15	□□□□□ -1.75
VARS-222	ENST00000470953		F6UB75	175 aa		4.15	□□□□□ -1.75
VARS-222	ENST00000470953	SIX6	O95475	246 aa		4.15	□□□□□ -1.75
VARS-222	ENST00000470953	HBE1	P02100	147 aa		4.15	□□□□□ -1.75
VARS-222	ENST00000470953	NMB	P08949	121 aa		4.15	□□□□□ -1.75
VARS-222	ENST00000470953	STAG3L2	P0CL84	134 aa		4.15	□□□□□ -1.75
VARS-222	ENST00000470953	S100A2	P29034	98 aa		4.15	□□□□□ -1.75
VARS-222	ENST00000470953	PAX9	P55771	341 aa		4.15	□□□□□ -1.75
VARS-222	ENST00000470953	DEFB1	P60022	68 aa		4.15	□□□□□ -1.75
VARS-222	ENST00000470953	EIF5A	P63241	154 aa	Known RBP	4.15	□□□□□ -1.75
VARS-222	ENST00000470953	PSG9	Q00887	426 aa		4.15	□□□□□ -1.75
VARS-222	ENST00000470953	FABP9	Q0Z7S8	132 aa		4.15	□□□□□ -1.75
VARS-222	ENST00000470953	CLINT1	Q14677	625 aa		4.15	□□□□□ -1.75
VARS-222	ENST00000470953	KIR3DS1	Q14943	382 aa		4.15	□□□□□ -1.75
VARS-222	ENST00000470953	FAM78B	Q5VT40	261 aa		4.15	□□□□□ -1.75

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