RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 SLC17A3O00476 420 aa12.8□□□□□ -0.36
EXOSC3-203ENST00000465229 LTAP01374 205 aa12.8□□□□□ -0.36
EXOSC3-203ENST00000465229 SNRPCP09234 159 aaKnown RBP12.8□□□□□ -0.36
EXOSC3-203ENST00000465229 AKR1D1P51857 326 aa12.8□□□□□ -0.36
EXOSC3-203ENST00000465229 SIGLEC15Q6ZMC9 328 aa12.8□□□□□ -0.36
EXOSC3-203ENST00000465229 LINC00518Q8N0U6 118 aa12.8□□□□□ -0.36
EXOSC3-203ENST00000465229 CMTM2Q8TAZ6 248 aa12.8□□□□□ -0.36
EXOSC3-203ENST00000465229 IGHV3-66A0A0C4DH42 116 aa12.8□□□□□ -0.36
EXOSC3-203ENST00000465229 BUB3O43684 328 aa12.8□□□□□ -0.36
EXOSC3-203ENST00000465229 RHPN1-AS1Q9BWJ2 59 aa12.8□□□□□ -0.36
EXOSC3-203ENST00000465229 RNASE7Q9H1E1 156 aaKnown RBP12.8□□□□□ -0.36
EXOSC3-203ENST00000465229 SMIM27A0A1W2PRY6 76 aa12.79□□□□□ -0.36
EXOSC3-203ENST00000465229 H3BTX0 84 aa12.79□□□□□ -0.36
EXOSC3-203ENST00000465229 CHEK1O14757 476 aa12.79□□□□□ -0.36
EXOSC3-203ENST00000465229 ZNF253O75346 499 aa12.79□□□□□ -0.36
EXOSC3-203ENST00000465229 NDUFA6P56556 154 aa12.79□□□□□ -0.36
EXOSC3-203ENST00000465229 PSG9Q00887 426 aa12.78□□□□□ -0.36
EXOSC3-203ENST00000465229 COX19Q49B96 90 aa12.78□□□□□ -0.36
EXOSC3-203ENST00000465229 SIGLEC8Q9NYZ4 499 aa12.78□□□□□ -0.36
EXOSC3-203ENST00000465229 ZNF492Q9P255 531 aa12.78□□□□□ -0.36
EXOSC3-203ENST00000465229 DNHD1Q96M86 4753 aa12.78□□□□□ -0.36
EXOSC3-203ENST00000465229 SERTM2A0A1B0GWG4 89 aa12.77□□□□□ -0.36
EXOSC3-203ENST00000465229 A0A1W2PS18 150 aa12.77□□□□□ -0.36
EXOSC3-203ENST00000465229 K7EQM0 130 aa12.77□□□□□ -0.36
EXOSC3-203ENST00000465229 CD33P20138 364 aa12.77□□□□□ -0.36
EXOSC3-203ENST00000465229 COA6Q5JTJ3 125 aaKnown RBP12.77□□□□□ -0.36
EXOSC3-203ENST00000465229 EXOC3-AS1Q8N2X6 119 aa12.77□□□□□ -0.36
EXOSC3-203ENST00000465229 TMEM75Q8N9X5 138 aa12.77□□□□□ -0.36
EXOSC3-203ENST00000465229 SELENOKQ9Y6D0 94 aa12.77□□□□□ -0.36
EXOSC3-203ENST00000465229 MGAM2Q2M2H8 2515 aa12.77□□□□□ -0.37
EXOSC3-203ENST00000465229 ZNF705GA8MUZ8 300 aaPredicted RBP12.77□□□□□ -0.37
EXOSC3-203ENST00000465229 GATCO43716 136 aaKnown RBP12.77□□□□□ -0.37
EXOSC3-203ENST00000465229 C16orf54Q6UWD8 224 aa12.77□□□□□ -0.37
EXOSC3-203ENST00000465229 GRAMD2BQ96HH9 432 aa12.77□□□□□ -0.37
EXOSC3-203ENST00000465229 C17orf77Q96MU5 243 aa12.77□□□□□ -0.37
EXOSC3-203ENST00000465229 AAMDCQ9H7C9 122 aa12.77□□□□□ -0.37
EXOSC3-203ENST00000465229 CMYA5Q8N3K9 4069 aa12.76□□□□□ -0.37
EXOSC3-203ENST00000465229 SAP30O75446 220 aa12.76□□□□□ -0.37
EXOSC3-203ENST00000465229 IGLV2-11P01706 119 aa12.76□□□□□ -0.37
EXOSC3-203ENST00000465229 CT83Q5H943 113 aa12.76□□□□□ -0.37
EXOSC3-203ENST00000465229 C1orf194Q5T5A4 169 aa12.76□□□□□ -0.37
EXOSC3-203ENST00000465229 Q86TA4 180 aa12.76□□□□□ -0.37
EXOSC3-203ENST00000465229 TMEM183AQ8IXX5 376 aa12.76□□□□□ -0.37
EXOSC3-203ENST00000465229 OR8I2Q8N0Y5 310 aa12.76□□□□□ -0.37
EXOSC3-203ENST00000465229 NHLRC2Q8NBF2 726 aa12.76□□□□□ -0.37
EXOSC3-203ENST00000465229 NUDT10Q8NFP7 164 aa12.76□□□□□ -0.37
EXOSC3-203ENST00000465229 NUDT11Q96G61 164 aa12.76□□□□□ -0.37
EXOSC3-203ENST00000465229 RPH3ALQ9UNE2 315 aa12.76□□□□□ -0.37
EXOSC3-203ENST00000465229 ZFP30Q9Y2G7 519 aa12.76□□□□□ -0.37
EXOSC3-203ENST00000465229 TRAPPC1Q9Y5R8 145 aa12.76□□□□□ -0.37
EXOSC3-203ENST00000465229 A0A087X0K7 114 aa12.75□□□□□ -0.37
EXOSC3-203ENST00000465229 FBLL1A6NHQ2 334 aaKnown RBP12.75□□□□□ -0.37
EXOSC3-203ENST00000465229 GOLT1AQ6ZVE7 132 aa12.75□□□□□ -0.37
EXOSC3-203ENST00000465229 GLMPQ8WWB7 406 aa12.75□□□□□ -0.37
EXOSC3-203ENST00000465229 GNB1LQ9BYB4 327 aa12.75□□□□□ -0.37
EXOSC3-203ENST00000465229 DIRC3C9JPN6 131 aa12.74□□□□□ -0.37
EXOSC3-203ENST00000465229 BMI1P35226 326 aa12.74□□□□□ -0.37
EXOSC3-203ENST00000465229 DEFB114Q30KQ6 69 aa12.74□□□□□ -0.37
EXOSC3-203ENST00000465229 WDR73Q6P4I2 378 aa12.74□□□□□ -0.37
EXOSC3-203ENST00000465229 C19orf71A6NCJ1 209 aa12.73□□□□□ -0.37
EXOSC3-203ENST00000465229 IZUMO1RA6ND01 250 aa12.73□□□□□ -0.37
EXOSC3-203ENST00000465229 MT-ND6P03923 174 aa12.73□□□□□ -0.37
EXOSC3-203ENST00000465229 SMIM6P0DI80 62 aa12.73□□□□□ -0.37
EXOSC3-203ENST00000465229 IGLL1P15814 213 aa12.73□□□□□ -0.37
EXOSC3-203ENST00000465229 RASL11AQ6T310 242 aa12.73□□□□□ -0.37
EXOSC3-203ENST00000465229 HIST3H2BBQ8N257 126 aa12.73□□□□□ -0.37
EXOSC3-203ENST00000465229 DYNLRB2Q8TF09 96 aa12.73□□□□□ -0.37
EXOSC3-203ENST00000465229 MCRIP2Q9BUT9 160 aaKnown RBP12.73□□□□□ -0.37
EXOSC3-203ENST00000465229 CSN1S1P47710 185 aa12.73□□□□□ -0.37
EXOSC3-203ENST00000465229 MEOX2P50222 304 aa12.73□□□□□ -0.37
EXOSC3-203ENST00000465229 PSG3Q16557 428 aa12.73□□□□□ -0.37
EXOSC3-203ENST00000465229 CD300EQ496F6 205 aaPredicted RBP12.73□□□□□ -0.37
EXOSC3-203ENST00000465229 PRR31Q5SQ13 230 aa12.73□□□□□ -0.37
EXOSC3-203ENST00000465229 TCF24Q7RTU0 167 aa12.73□□□□□ -0.37
EXOSC3-203ENST00000465229 TSKUQ8WUA8 353 aa12.73□□□□□ -0.37
EXOSC3-203ENST00000465229 SMAD5-AS1Q9Y6J3 95 aa12.73□□□□□ -0.37
EXOSC3-203ENST00000465229 IGLV1-51P01701 117 aa12.72□□□□□ -0.37
EXOSC3-203ENST00000465229 INSL3P51460 131 aa12.72□□□□□ -0.37
EXOSC3-203ENST00000465229 C9orf66Q5T8R8 295 aa12.72□□□□□ -0.37
EXOSC3-203ENST00000465229 XKRY2A2RUG3 117 aa12.71□□□□□ -0.37
EXOSC3-203ENST00000465229 FAM231BA6NCW3 169 aa12.71□□□□□ -0.37
EXOSC3-203ENST00000465229 IFITM10A6NMD0 228 aa12.71□□□□□ -0.37
EXOSC3-203ENST00000465229 NPIPB6E9PJ23 425 aa12.71□□□□□ -0.37
EXOSC3-203ENST00000465229 PRR27Q6MZM9 219 aa12.71□□□□□ -0.37
EXOSC3-203ENST00000465229 OR4B1Q8NGF8 309 aa12.71□□□□□ -0.37
EXOSC3-203ENST00000465229 SGK494Q96LW2 274 aa12.71□□□□□ -0.37
EXOSC3-203ENST00000465229 RPP21Q9H633 154 aaKnown RBP12.71□□□□□ -0.37
EXOSC3-203ENST00000465229 NAT8BQ9UHF3 227 aa12.71□□□□□ -0.37
EXOSC3-203ENST00000465229 PSG8Q9UQ74 426 aa12.71□□□□□ -0.37
EXOSC3-203ENST00000465229 SORL1Q92673 2214 aa12.71□□□□□ -0.37
EXOSC3-203ENST00000465229 TRAV8-1A0A0A6YYK1 113 aa12.7□□□□□ -0.38
EXOSC3-203ENST00000465229 A8MWL6 223 aa12.7□□□□□ -0.38
EXOSC3-203ENST00000465229 PRNTQ86SH4 94 aa12.7□□□□□ -0.38
EXOSC3-203ENST00000465229 TMEM61Q8N0U2 210 aa12.7□□□□□ -0.38
EXOSC3-203ENST00000465229 C12orf57Q99622 126 aa12.7□□□□□ -0.38
EXOSC3-203ENST00000465229 GFRA4Q9GZZ7 299 aa12.7□□□□□ -0.38
EXOSC3-203ENST00000465229 P01737 135 aa12.7□□□□□ -0.38
EXOSC3-203ENST00000465229 S100A2P29034 98 aa12.7□□□□□ -0.38
EXOSC3-203ENST00000465229 RPL11P62913 178 aaKnown RBP12.7□□□□□ -0.38
EXOSC3-203ENST00000465229 COX8CQ7Z4L0 72 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms