RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 NRARPQ7Z6K4 114 aa14.08□□□□□ -0.16
CPSF7-209ENST00000463244 OR1L4Q8NGR5 311 aa14.08□□□□□ -0.16
CPSF7-209ENST00000463244 TRBV19A0A075B6N1 114 aa14.07□□□□□ -0.16
CPSF7-209ENST00000463244 TRAV9-2A0A087WT02 112 aa14.07□□□□□ -0.16
CPSF7-209ENST00000463244 MPDU1O75352 247 aa14.07□□□□□ -0.16
CPSF7-209ENST00000463244 S100A5P33763 92 aa14.07□□□□□ -0.16
CPSF7-209ENST00000463244 RNASE4P34096 147 aaKnown RBP14.07□□□□□ -0.16
CPSF7-209ENST00000463244 CRYBA4P53673 196 aa14.07□□□□□ -0.16
CPSF7-209ENST00000463244 SLAQ13239 276 aa14.07□□□□□ -0.16
CPSF7-209ENST00000463244 RAB31Q13636 194 aa14.07□□□□□ -0.16
CPSF7-209ENST00000463244 LINC00477Q96M19 166 aa14.07□□□□□ -0.16
CPSF7-209ENST00000463244 PFDN5Q99471 154 aa14.07□□□□□ -0.16
CPSF7-209ENST00000463244 VGLL1Q99990 258 aa14.07□□□□□ -0.16
CPSF7-209ENST00000463244 AGPAT4-IT1Q9H0P7 198 aa14.07□□□□□ -0.16
CPSF7-209ENST00000463244 LY96Q9Y6Y9 160 aa14.07□□□□□ -0.16
CPSF7-209ENST00000463244 NAP1L6A6NFF2 107 aa14.06□□□□□ -0.16
CPSF7-209ENST00000463244 SMR3BP02814 79 aaPredicted RBP14.06□□□□□ -0.16
CPSF7-209ENST00000463244 CRISP2P16562 243 aa14.06□□□□□ -0.16
CPSF7-209ENST00000463244 MRPL23Q16540 153 aaKnown RBP14.06□□□□□ -0.16
CPSF7-209ENST00000463244 HHLA3Q9XRX5 114 aa14.06□□□□□ -0.16
CPSF7-209ENST00000463244 NDUFB4O95168 129 aa14.05□□□□□ -0.16
CPSF7-209ENST00000463244 GPX1P07203 203 aa14.05□□□□□ -0.16
CPSF7-209ENST00000463244 FHL2Q14192 279 aa14.05□□□□□ -0.16
CPSF7-209ENST00000463244 C8orf49Q96NF6 230 aa14.05□□□□□ -0.16
CPSF7-209ENST00000463244 SRRQ9GZT4 340 aa14.05□□□□□ -0.16
CPSF7-209ENST00000463244 MRPL16Q9NX20 251 aaKnown RBP14.05□□□□□ -0.16
CPSF7-209ENST00000463244 MDFICQ9P1T7 246 aa14.05□□□□□ -0.16
CPSF7-209ENST00000463244 TP53TG3Q9ULZ0 132 aa14.05□□□□□ -0.16
CPSF7-209ENST00000463244 PRELID1Q9Y255 219 aa14.05□□□□□ -0.16
CPSF7-209ENST00000463244 K7EP13 123 aa14.04□□□□□ -0.16
CPSF7-209ENST00000463244 PRAF2O60831 178 aa14.04□□□□□ -0.16
CPSF7-209ENST00000463244 NMBP08949 121 aa14.04□□□□□ -0.16
CPSF7-209ENST00000463244 GCSHP23434 173 aa14.04□□□□□ -0.16
CPSF7-209ENST00000463244 PDE6HQ13956 83 aa14.04□□□□□ -0.16
CPSF7-209ENST00000463244 C9orf47Q6ZRZ4 202 aa14.04□□□□□ -0.16
CPSF7-209ENST00000463244 NEGR1Q7Z3B1 354 aa14.04□□□□□ -0.16
CPSF7-209ENST00000463244 MITD1Q8WV92 249 aa14.04□□□□□ -0.16
CPSF7-209ENST00000463244 MSRB1Q9NZV6 116 aa14.04□□□□□ -0.16
CPSF7-209ENST00000463244 TMEM14CQ9P0S9 112 aa14.04□□□□□ -0.16
CPSF7-209ENST00000463244 WDR83OSQ9Y284 106 aa14.04□□□□□ -0.16
CPSF7-209ENST00000463244 L7N2F9 121 aa14.03□□□□□ -0.16
CPSF7-209ENST00000463244 RGS13O14921 159 aa14.03□□□□□ -0.16
CPSF7-209ENST00000463244 RPL29P47914 159 aaKnown RBP14.03□□□□□ -0.16
CPSF7-209ENST00000463244 VAMP2P63027 116 aa14.03□□□□□ -0.16
CPSF7-209ENST00000463244 PRR9Q5T870 116 aa14.03□□□□□ -0.16
CPSF7-209ENST00000463244 C12orf45Q8N5I9 185 aaPredicted RBP14.03□□□□□ -0.16
CPSF7-209ENST00000463244 ZFAND2AQ8N6M9 145 aa14.03□□□□□ -0.16
CPSF7-209ENST00000463244 SLC39A9Q9NUM3 307 aa14.03□□□□□ -0.16
CPSF7-209ENST00000463244 UQCC1Q9NVA1 299 aa14.03□□□□□ -0.16
CPSF7-209ENST00000463244 IGHV1OR15-1A0A075B7D0 117 aa14.02□□□□□ -0.17
CPSF7-209ENST00000463244 CST7O76096 145 aa14.02□□□□□ -0.17
CPSF7-209ENST00000463244 HIST1H1EP10412 219 aaKnown RBP14.02□□□□□ -0.17
CPSF7-209ENST00000463244 BAK1Q16611 211 aa14.02□□□□□ -0.17
CPSF7-209ENST00000463244 Q6ZQT7 251 aa14.02□□□□□ -0.17
CPSF7-209ENST00000463244 WFDC10BQ8IUB3 73 aa14.02□□□□□ -0.17
CPSF7-209ENST00000463244 MRPL32Q9BYC8 188 aaKnown RBP14.02□□□□□ -0.17
CPSF7-209ENST00000463244 TIMM9Q9Y5J7 89 aa14.02□□□□□ -0.17
CPSF7-209ENST00000463244 K7EQD1 137 aa14.01□□□□□ -0.17
CPSF7-209ENST00000463244 EVI2AP22794 236 aa14.01□□□□□ -0.17
CPSF7-209ENST00000463244 BTCP35070 178 aa14.01□□□□□ -0.17
CPSF7-209ENST00000463244 INPP1P49441 399 aa14.01□□□□□ -0.17
CPSF7-209ENST00000463244 BCAP31P51572 246 aa14.01□□□□□ -0.17
CPSF7-209ENST00000463244 CAV2P51636 162 aa14.01□□□□□ -0.17
CPSF7-209ENST00000463244 VWC2Q2TAL6 325 aa14.01□□□□□ -0.17
CPSF7-209ENST00000463244 SPANXN2Q5MJ10 180 aa14.01□□□□□ -0.17
CPSF7-209ENST00000463244 EXOC3-AS1Q8N2X6 119 aa14.01□□□□□ -0.17
CPSF7-209ENST00000463244 ARPC5LQ9BPX5 153 aa14.01□□□□□ -0.17
CPSF7-209ENST00000463244 IGKV2-40A0A087WW87 121 aaPredicted RBP14□□□□□ -0.17
CPSF7-209ENST00000463244 FAM229AH3BQW9 127 aa14□□□□□ -0.17
CPSF7-209ENST00000463244 IGKV2D-40P01614 121 aaPredicted RBP14□□□□□ -0.17
CPSF7-209ENST00000463244 PYYP10082 97 aa14□□□□□ -0.17
CPSF7-209ENST00000463244 SRIP30626 198 aa14□□□□□ -0.17
CPSF7-209ENST00000463244 TMEM78Q5T7P6 136 aa14□□□□□ -0.17
CPSF7-209ENST00000463244 TRIQKQ629K1 86 aa14□□□□□ -0.17
CPSF7-209ENST00000463244 BLNKQ8WV28 456 aa14□□□□□ -0.17
CPSF7-209ENST00000463244 C20orf85Q9H1P6 137 aa14□□□□□ -0.17
CPSF7-209ENST00000463244 C11orf1Q9H5F2 150 aa14□□□□□ -0.17
CPSF7-209ENST00000463244 LSM5Q9Y4Y9 91 aaKnown RBP14□□□□□ -0.17
CPSF7-209ENST00000463244 E5RGE8 158 aa13.99□□□□□ -0.17
CPSF7-209ENST00000463244 CCSO14618 274 aa13.99□□□□□ -0.17
CPSF7-209ENST00000463244 HAMPP81172 84 aa13.99□□□□□ -0.17
CPSF7-209ENST00000463244 Q6ZSN1 163 aa13.99□□□□□ -0.17
CPSF7-209ENST00000463244 AAMDCQ9H7C9 122 aa13.99□□□□□ -0.17
CPSF7-209ENST00000463244 ZNF492Q9P255 531 aa13.99□□□□□ -0.17
CPSF7-209ENST00000463244 TRGV4A0A0C4DH28 118 aa13.98□□□□□ -0.17
CPSF7-209ENST00000463244 UBE2L5PA0A1B0GUS4 154 aa13.98□□□□□ -0.17
CPSF7-209ENST00000463244 FAM24AA6NFZ4 105 aa13.98□□□□□ -0.17
CPSF7-209ENST00000463244 BAXQ07812 192 aa13.98□□□□□ -0.17
CPSF7-209ENST00000463244 ZNF415Q09FC8 603 aa13.98□□□□□ -0.17
CPSF7-209ENST00000463244 ZNF846Q147U1 533 aa13.98□□□□□ -0.17
CPSF7-209ENST00000463244 IQCF2Q8IXL9 164 aa13.98□□□□□ -0.17
CPSF7-209ENST00000463244 CHAC2Q8WUX2 184 aa13.98□□□□□ -0.17
CPSF7-209ENST00000463244 TMEM70Q9BUB7 260 aa13.97□□□□□ -0.17
CPSF7-209ENST00000463244 CRYGDP07320 174 aa13.96□□□□□ -0.17
CPSF7-209ENST00000463244 SFTA3P0C7M3 94 aa13.96□□□□□ -0.17
CPSF7-209ENST00000463244 GYPEP15421 78 aa13.96□□□□□ -0.17
CPSF7-209ENST00000463244 S100A11P31949 105 aa13.96□□□□□ -0.17
CPSF7-209ENST00000463244 FAM122CQ6P4D5 195 aa13.96□□□□□ -0.17
CPSF7-209ENST00000463244 C10orf126Q8N4M7 172 aa13.96□□□□□ -0.17
CPSF7-209ENST00000463244 PCNPQ8WW12 178 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms