RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 FXYD5Q96DB9 178 aa5.62□□□□□ -1.51
CDC42BPA-210ENST00000462553 MRPL53Q96EL3 112 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-210ENST00000462553 MRPL32Q9BYC8 188 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-210ENST00000462553 FUT9Q9Y231 359 aa5.62□□□□□ -1.51
CDC42BPA-210ENST00000462553 FAT1Q14517 4588 aa5.62□□□□□ -1.51
CDC42BPA-210ENST00000462553 IGLV2-18A0A075B6J9 118 aa5.61□□□□□ -1.51
CDC42BPA-210ENST00000462553 TRAV12-2A0A075B6T6 113 aa5.61□□□□□ -1.51
CDC42BPA-210ENST00000462553 IGHV3OR16-12A0A075B7B8 117 aa5.61□□□□□ -1.51
CDC42BPA-210ENST00000462553 C17orf112F2Z3M2 114 aa5.61□□□□□ -1.51
CDC42BPA-210ENST00000462553 INSP01308 110 aa5.61□□□□□ -1.51
CDC42BPA-210ENST00000462553 PRM2P04554 102 aa5.61□□□□□ -1.51
CDC42BPA-210ENST00000462553 RAB2AP61019 212 aa5.61□□□□□ -1.51
CDC42BPA-210ENST00000462553 EXOC3-AS1Q8N2X6 119 aa5.61□□□□□ -1.51
CDC42BPA-210ENST00000462553 OR2T35Q8NGX2 323 aa5.61□□□□□ -1.51
CDC42BPA-210ENST00000462553 OR2G3Q8NGZ4 309 aa5.61□□□□□ -1.51
CDC42BPA-210ENST00000462553 PHYHIPLQ96FC7 376 aa5.61□□□□□ -1.51
CDC42BPA-210ENST00000462553 PAXXQ9BUH6 204 aa5.61□□□□□ -1.51
CDC42BPA-210ENST00000462553 TNFSF18Q9UNG2 199 aa5.61□□□□□ -1.51
CDC42BPA-210ENST00000462553 GOLT1BQ9Y3E0 138 aa5.61□□□□□ -1.51
CDC42BPA-210ENST00000462553 TIMM9Q9Y5J7 89 aa5.61□□□□□ -1.51
CDC42BPA-210ENST00000462553 FXYD6-FXYD2A0A087WZ82 144 aa5.6□□□□□ -1.51
CDC42BPA-210ENST00000462553 PLAC8L1A1L4L8 177 aa5.6□□□□□ -1.51
CDC42BPA-210ENST00000462553 SMIM9A6NGZ8 99 aa5.6□□□□□ -1.51
CDC42BPA-210ENST00000462553 NPIPB6E9PJ23 425 aa5.6□□□□□ -1.51
CDC42BPA-210ENST00000462553 SMLR1H3BR10 107 aa5.6□□□□□ -1.51
CDC42BPA-210ENST00000462553 NBEAP1P0C6P0 100 aa5.6□□□□□ -1.51
CDC42BPA-210ENST00000462553 CT45A10P0DMU9 189 aa5.6□□□□□ -1.51
CDC42BPA-210ENST00000462553 M6PRP20645 277 aa5.6□□□□□ -1.51
CDC42BPA-210ENST00000462553 ATP6V0CP27449 155 aa5.6□□□□□ -1.51
CDC42BPA-210ENST00000462553 RHOBP62745 196 aa5.6□□□□□ -1.51
CDC42BPA-210ENST00000462553 SCGB1C1Q8TD33 95 aa5.6□□□□□ -1.51
CDC42BPA-210ENST00000462553 BLNKQ8WV28 456 aa5.6□□□□□ -1.51
CDC42BPA-210ENST00000462553 RNF141Q8WVD5 230 aa5.6□□□□□ -1.51
CDC42BPA-210ENST00000462553 ODF3Q96PU9 254 aa5.6□□□□□ -1.51
CDC42BPA-210ENST00000462553 SH3BGRL3Q9H299 93 aa5.6□□□□□ -1.51
CDC42BPA-210ENST00000462553 OR51M1Q9H341 326 aa5.6□□□□□ -1.51
CDC42BPA-210ENST00000462553 DKK2Q9UBU2 259 aa5.6□□□□□ -1.51
CDC42BPA-210ENST00000462553 MYCBP2O75592 4640 aa5.59□□□□□ -1.51
CDC42BPA-210ENST00000462553 IGKV2-40A0A087WW87 121 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-210ENST00000462553 LOC102723971A0A1B0GUV8 181 aa5.59□□□□□ -1.51
CDC42BPA-210ENST00000462553 ZNF705GA8MUZ8 300 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-210ENST00000462553 OR7C2O60412 319 aa5.59□□□□□ -1.51
CDC42BPA-210ENST00000462553 IGKV2D-40P01614 121 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-210ENST00000462553 OR10J4P0C629 311 aa5.59□□□□□ -1.51
CDC42BPA-210ENST00000462553 CDKN1BP46527 198 aa5.59□□□□□ -1.51
CDC42BPA-210ENST00000462553 UBE2L3P68036 154 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-210ENST00000462553 ERCC8Q13216 396 aa5.59□□□□□ -1.51
CDC42BPA-210ENST00000462553 ZNF266Q14584 549 aa5.59□□□□□ -1.51
CDC42BPA-210ENST00000462553 ICAM4Q14773 271 aa5.59□□□□□ -1.51
CDC42BPA-210ENST00000462553 KHDC3LQ587J8 217 aa5.59□□□□□ -1.51
CDC42BPA-210ENST00000462553 FAM222AQ5U5X8 452 aa5.59□□□□□ -1.51
CDC42BPA-210ENST00000462553 GFI1BQ5VTD9 330 aa5.59□□□□□ -1.51
CDC42BPA-210ENST00000462553 RPL7L1Q6DKI1 246 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-210ENST00000462553 HSD17B11Q8NBQ5 300 aa5.59□□□□□ -1.51
CDC42BPA-210ENST00000462553 OR10J6PQ8NGY7 276 aa5.59□□□□□ -1.51
CDC42BPA-210ENST00000462553 FAM19A4Q96LR4 140 aa5.59□□□□□ -1.51
CDC42BPA-210ENST00000462553 PSMG3Q9BT73 122 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-210ENST00000462553 PRELID1Q9Y255 219 aa5.59□□□□□ -1.51
CDC42BPA-210ENST00000462553 TMEM189A5PLL7 270 aa5.58□□□□□ -1.52
CDC42BPA-210ENST00000462553 HBE1P02100 147 aa5.58□□□□□ -1.52
CDC42BPA-210ENST00000462553 SPART-AS1P0CW21 52 aa5.58□□□□□ -1.52
CDC42BPA-210ENST00000462553 AZU1P20160 251 aa5.58□□□□□ -1.52
CDC42BPA-210ENST00000462553 EMP1P54849 157 aa5.58□□□□□ -1.52
CDC42BPA-210ENST00000462553 RRN3P1Q2M238 152 aa5.58□□□□□ -1.52
CDC42BPA-210ENST00000462553 ACOT6Q3I5F7 207 aaPredicted RBP5.58□□□□□ -1.52
CDC42BPA-210ENST00000462553 PRR9Q5T870 116 aa5.58□□□□□ -1.52
CDC42BPA-210ENST00000462553 FAM122CQ6P4D5 195 aa5.58□□□□□ -1.52
CDC42BPA-210ENST00000462553 C9orf47Q6ZRZ4 202 aa5.58□□□□□ -1.52
CDC42BPA-210ENST00000462553 SSX7Q7RTT5 188 aa5.58□□□□□ -1.52
CDC42BPA-210ENST00000462553 UBE2DNLQ8IWF7 75 aa5.58□□□□□ -1.52
CDC42BPA-210ENST00000462553 OR11H4Q8NGC9 324 aa5.58□□□□□ -1.52
CDC42BPA-210ENST00000462553 FAM210BQ96KR6 192 aa5.58□□□□□ -1.52
CDC42BPA-210ENST00000462553 VGLL1Q99990 258 aa5.58□□□□□ -1.52
CDC42BPA-210ENST00000462553 NIPSNAP3BQ9BS92 247 aa5.58□□□□□ -1.52
CDC42BPA-210ENST00000462553 AGPAT4-IT1Q9H0P7 198 aa5.58□□□□□ -1.52
CDC42BPA-210ENST00000462553 Q9H3A6 140 aa5.58□□□□□ -1.52
CDC42BPA-210ENST00000462553 CYTL1Q9NRR1 136 aa5.58□□□□□ -1.52
CDC42BPA-210ENST00000462553 DMBT1Q9UGM3 2413 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-210ENST00000462553 KLLNB2CW77 178 aa5.57□□□□□ -1.52
CDC42BPA-210ENST00000462553 HMGB3O15347 200 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-210ENST00000462553 STAG3L2P0CL84 134 aa5.57□□□□□ -1.52
CDC42BPA-210ENST00000462553 STAG3L3P0CL85 134 aa5.57□□□□□ -1.52
CDC42BPA-210ENST00000462553 ARL14EPLP0DKL9 152 aa5.57□□□□□ -1.52
CDC42BPA-210ENST00000462553 TSPOP30536 169 aa5.57□□□□□ -1.52
CDC42BPA-210ENST00000462553 TAS2R45P59539 299 aa5.57□□□□□ -1.52
CDC42BPA-210ENST00000462553 RNF212Q495C1 297 aa5.57□□□□□ -1.52
CDC42BPA-210ENST00000462553 TMEM88Q6PEY1 159 aa5.57□□□□□ -1.52
CDC42BPA-210ENST00000462553 TMEM256Q8N2U0 113 aa5.57□□□□□ -1.52
CDC42BPA-210ENST00000462553 ZFAND2AQ8N6M9 145 aa5.57□□□□□ -1.52
CDC42BPA-210ENST00000462553 INO80EQ8NBZ0 244 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-210ENST00000462553 OR10G4Q8NGN3 311 aa5.57□□□□□ -1.52
CDC42BPA-210ENST00000462553 OR10G9Q8NGN4 311 aa5.57□□□□□ -1.52
CDC42BPA-210ENST00000462553 OR10G7Q8NGN6 311 aa5.57□□□□□ -1.52
CDC42BPA-210ENST00000462553 SUN5Q8TC36 379 aa5.57□□□□□ -1.52
CDC42BPA-210ENST00000462553 RNASE8Q8TDE3 154 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-210ENST00000462553 C20orf144Q9BQM9 153 aa5.57□□□□□ -1.52
CDC42BPA-210ENST00000462553 TMEM208Q9BTX3 173 aa5.57□□□□□ -1.52
CDC42BPA-210ENST00000462553 AAMDCQ9H7C9 122 aa5.57□□□□□ -1.52
CDC42BPA-210ENST00000462553 YTHDF2Q9Y5A9 579 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-210ENST00000462553 TEX48A0A1B0GUV7 120 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms