RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 RBAKDNA6NC62 111 aa11.38□□□□□ -0.59
TMEM39A-203ENST00000461654 KRTAP10-11P60412 298 aa11.38□□□□□ -0.59
TMEM39A-203ENST00000461654 ADIRFQ15847 76 aa11.38□□□□□ -0.59
TMEM39A-203ENST00000461654 BAGE2Q86Y30 109 aa11.38□□□□□ -0.59
TMEM39A-203ENST00000461654 IGKV2-40A0A087WW87 121 aaPredicted RBP11.37□□□□□ -0.59
TMEM39A-203ENST00000461654 B4DEV8 164 aa11.37□□□□□ -0.59
TMEM39A-203ENST00000461654 K7EIL1 84 aa11.37□□□□□ -0.59
TMEM39A-203ENST00000461654 IGKV2D-40P01614 121 aaPredicted RBP11.37□□□□□ -0.59
TMEM39A-203ENST00000461654 ZNF688P0C7X2 276 aa11.37□□□□□ -0.59
TMEM39A-203ENST00000461654 INSL3P51460 131 aa11.37□□□□□ -0.59
TMEM39A-203ENST00000461654 PSMG4Q5JS54 123 aa11.37□□□□□ -0.59
TMEM39A-203ENST00000461654 TMEM78Q5T7P6 136 aa11.37□□□□□ -0.59
TMEM39A-203ENST00000461654 C9orf66Q5T8R8 295 aa11.37□□□□□ -0.59
TMEM39A-203ENST00000461654 PRNTQ86SH4 94 aa11.37□□□□□ -0.59
TMEM39A-203ENST00000461654 CLRN3Q8NCR9 226 aa11.37□□□□□ -0.59
TMEM39A-203ENST00000461654 SMIM12Q96EX1 92 aa11.37□□□□□ -0.59
TMEM39A-203ENST00000461654 SGK494Q96LW2 274 aa11.37□□□□□ -0.59
TMEM39A-203ENST00000461654 NDFIP1Q9BT67 221 aa11.37□□□□□ -0.59
TMEM39A-203ENST00000461654 ZMAT5Q9UDW3 170 aaKnown RBP11.37□□□□□ -0.59
TMEM39A-203ENST00000461654 PSG8Q9UQ74 426 aa11.37□□□□□ -0.59
TMEM39A-203ENST00000461654 ZFP30Q9Y2G7 519 aa11.37□□□□□ -0.59
TMEM39A-203ENST00000461654 IGLV1-51P01701 117 aa11.36□□□□□ -0.59
TMEM39A-203ENST00000461654 MGST1P10620 155 aaKnown RBP11.36□□□□□ -0.59
TMEM39A-203ENST00000461654 CMC4P56277 68 aaPredicted RBP11.36□□□□□ -0.59
TMEM39A-203ENST00000461654 RPL23P62829 140 aaKnown RBP11.36□□□□□ -0.59
TMEM39A-203ENST00000461654 SAPCD1Q5SSQ6 148 aa11.36□□□□□ -0.59
TMEM39A-203ENST00000461654 Q86TA4 180 aa11.36□□□□□ -0.59
TMEM39A-203ENST00000461654 C20orf173Q96LM9 149 aa11.36□□□□□ -0.59
TMEM39A-203ENST00000461654 IGF2BP2-AS1Q96M15 143 aa11.36□□□□□ -0.59
TMEM39A-203ENST00000461654 BIN3Q9NQY0 253 aa11.36□□□□□ -0.59
TMEM39A-203ENST00000461654 TRBV20OR9-2A0A075B6H5 130 aa11.35□□□□□ -0.59
TMEM39A-203ENST00000461654 TRAV8-1A0A0A6YYK1 113 aa11.35□□□□□ -0.59
TMEM39A-203ENST00000461654 PRAC2D3DTV9 90 aa11.35□□□□□ -0.59
TMEM39A-203ENST00000461654 LTAP01374 205 aa11.35□□□□□ -0.59
TMEM39A-203ENST00000461654 RHEBQ15382 184 aa11.35□□□□□ -0.59
TMEM39A-203ENST00000461654 EBLN2Q6P2I7 272 aa11.35□□□□□ -0.59
TMEM39A-203ENST00000461654 LINC01551Q86U37 167 aa11.35□□□□□ -0.59
TMEM39A-203ENST00000461654 OCC1Q8TAD7 63 aa11.35□□□□□ -0.59
TMEM39A-203ENST00000461654 PGPEP1LA6NFU8 196 aa11.34□□□□□ -0.59
TMEM39A-203ENST00000461654 IGLV2-11P01706 119 aa11.34□□□□□ -0.59
TMEM39A-203ENST00000461654 MT-ND4LP03901 98 aa11.34□□□□□ -0.59
TMEM39A-203ENST00000461654 ZNF138P52744 262 aa11.34□□□□□ -0.59
TMEM39A-203ENST00000461654 HIST1H1AQ02539 215 aaPredicted RBP11.34□□□□□ -0.59
TMEM39A-203ENST00000461654 OR8A1Q8NGG7 326 aa11.34□□□□□ -0.59
TMEM39A-203ENST00000461654 LINC00477Q96M19 166 aa11.34□□□□□ -0.59
TMEM39A-203ENST00000461654 VGLL1Q99990 258 aa11.34□□□□□ -0.59
TMEM39A-203ENST00000461654 RPS10P5Q9NQ39 176 aa11.34□□□□□ -0.59
TMEM39A-203ENST00000461654 C7orf77A4D0Y5 90 aa11.33□□□□□ -0.6
TMEM39A-203ENST00000461654 CT45A10P0DMU9 189 aa11.33□□□□□ -0.6
TMEM39A-203ENST00000461654 PRB4P10163 310 aaPredicted RBP11.33□□□□□ -0.6
TMEM39A-203ENST00000461654 C9orf47Q6ZRZ4 202 aa11.33□□□□□ -0.6
TMEM39A-203ENST00000461654 TMEM183AQ8IXX5 376 aa11.33□□□□□ -0.6
TMEM39A-203ENST00000461654 FAM24BQ8N5W8 94 aa11.33□□□□□ -0.6
TMEM39A-203ENST00000461654 NHLRC2Q8NBF2 726 aa11.33□□□□□ -0.6
TMEM39A-203ENST00000461654 PPP1R14DQ9NXH3 145 aa11.33□□□□□ -0.6
TMEM39A-203ENST00000461654 IZUMO1RA6ND01 250 aa11.32□□□□□ -0.6
TMEM39A-203ENST00000461654 NPIPB6E9PJ23 425 aa11.32□□□□□ -0.6
TMEM39A-203ENST00000461654 DUSP14O95147 198 aaKnown RBP11.32□□□□□ -0.6
TMEM39A-203ENST00000461654 DEFB131AP59861 70 aa11.32□□□□□ -0.6
TMEM39A-203ENST00000461654 ERCC8Q13216 396 aa11.32□□□□□ -0.6
TMEM39A-203ENST00000461654 FOXI2Q6ZQN5 318 aa11.32□□□□□ -0.6
TMEM39A-203ENST00000461654 C15orf54Q8N8G6 183 aa11.32□□□□□ -0.6
TMEM39A-203ENST00000461654 AGPAT4-IT1Q9H0P7 198 aa11.32□□□□□ -0.6
TMEM39A-203ENST00000461654 PPP1R2P9O14990 202 aa11.31□□□□□ -0.6
TMEM39A-203ENST00000461654 GCGP01275 180 aa11.31□□□□□ -0.6
TMEM39A-203ENST00000461654 ISOC2Q96AB3 205 aa11.31□□□□□ -0.6
TMEM39A-203ENST00000461654 DAZAP1Q96EP5 407 aaKnown RBP11.31□□□□□ -0.6
TMEM39A-203ENST00000461654 PRR25Q96S07 402 aa11.31□□□□□ -0.6
TMEM39A-203ENST00000461654 CTDSP1Q9GZU7 261 aa11.31□□□□□ -0.6
TMEM39A-203ENST00000461654 ZNF492Q9P255 531 aa11.31□□□□□ -0.6
TMEM39A-203ENST00000461654 ZNF256Q9Y2P7 627 aaPredicted RBP11.31□□□□□ -0.6
TMEM39A-203ENST00000461654 LENEPQ9Y5L5 61 aa11.31□□□□□ -0.6
TMEM39A-203ENST00000461654 A0A0J9YX75 114 aa11.3□□□□□ -0.6
TMEM39A-203ENST00000461654 OR11H12B2RN74 326 aa11.3□□□□□ -0.6
TMEM39A-203ENST00000461654 F6UB75 175 aa11.3□□□□□ -0.6
TMEM39A-203ENST00000461654 IGLV2-8P01709 118 aa11.3□□□□□ -0.6
TMEM39A-203ENST00000461654 ZNF705DP0CH99 300 aaPredicted RBP11.3□□□□□ -0.6
TMEM39A-203ENST00000461654 ZNF705BP0CI00 300 aaPredicted RBP11.3□□□□□ -0.6
TMEM39A-203ENST00000461654 ERVFC1-1P60608 527 aa11.3□□□□□ -0.6
TMEM39A-203ENST00000461654 DEFB121Q5J5C9 76 aa11.3□□□□□ -0.6
TMEM39A-203ENST00000461654 PRR27Q6MZM9 219 aa11.3□□□□□ -0.6
TMEM39A-203ENST00000461654 Q8TAT8 98 aa11.3□□□□□ -0.6
TMEM39A-203ENST00000461654 ANAPC16Q96DE5 110 aa11.3□□□□□ -0.6
TMEM39A-203ENST00000461654 SFRP2Q96HF1 295 aa11.3□□□□□ -0.6
TMEM39A-203ENST00000461654 MLST8Q9BVC4 326 aa11.3□□□□□ -0.6
TMEM39A-203ENST00000461654 SAV1Q9H4B6 383 aaPredicted RBP11.3□□□□□ -0.6
TMEM39A-203ENST00000461654 MAP6D1Q9H9H5 199 aa11.3□□□□□ -0.6
TMEM39A-203ENST00000461654 A0A087WWC5 75 aa11.29□□□□□ -0.6
TMEM39A-203ENST00000461654 H7BYZ3 331 aa11.29□□□□□ -0.6
TMEM39A-203ENST00000461654 K7EN84 100 aa11.29□□□□□ -0.6
TMEM39A-203ENST00000461654 OR5I1Q13606 314 aa11.29□□□□□ -0.6
TMEM39A-203ENST00000461654 SMUG1Q53HV7 270 aa11.29□□□□□ -0.6
TMEM39A-203ENST00000461654 ATRAIDQ6UW56 229 aa11.29□□□□□ -0.6
TMEM39A-203ENST00000461654 OR10G8Q8NGN5 311 aa11.29□□□□□ -0.6
TMEM39A-203ENST00000461654 TRBV7-9A0A0J9YWB2 115 aa11.28□□□□□ -0.6
TMEM39A-203ENST00000461654 DEFB1P60022 68 aa11.28□□□□□ -0.6
TMEM39A-203ENST00000461654 RNF212Q495C1 297 aa11.28□□□□□ -0.6
TMEM39A-203ENST00000461654 IBA57Q5T440 356 aaKnown RBP11.28□□□□□ -0.6
TMEM39A-203ENST00000461654 OR4B1Q8NGF8 309 aa11.28□□□□□ -0.6
TMEM39A-203ENST00000461654 OSTCQ9NRP0 149 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms