RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 APRG1Q8IVJ8 170 aa11.43□□□□□ -0.58
SDF4-204ENST00000459994 OR8A1Q8NGG7 326 aa11.43□□□□□ -0.58
SDF4-204ENST00000459994 HIST1H2BAQ96A08 127 aa11.43□□□□□ -0.58
SDF4-204ENST00000459994 SAV1Q9H4B6 383 aaPredicted RBP11.43□□□□□ -0.58
SDF4-204ENST00000459994 A0A0J9YX75 114 aa11.42□□□□□ -0.58
SDF4-204ENST00000459994 RBAKDNA6NC62 111 aa11.42□□□□□ -0.58
SDF4-204ENST00000459994 F6UZH7 168 aa11.42□□□□□ -0.58
SDF4-204ENST00000459994 TCRAP04437 139 aa11.42□□□□□ -0.58
SDF4-204ENST00000459994 RPL35AP18077 110 aaKnown RBP11.42□□□□□ -0.58
SDF4-204ENST00000459994 DEFB135Q30KP9 77 aa11.42□□□□□ -0.58
SDF4-204ENST00000459994 TOR2AQ5JU69 321 aa11.42□□□□□ -0.58
SDF4-204ENST00000459994 EBLN2Q6P2I7 272 aa11.42□□□□□ -0.58
SDF4-204ENST00000459994 RARRES2Q99969 163 aa11.42□□□□□ -0.58
SDF4-204ENST00000459994 ATG101Q9BSB4 218 aa11.42□□□□□ -0.58
SDF4-204ENST00000459994 RAB19A4D1S5 217 aa11.41□□□□□ -0.58
SDF4-204ENST00000459994 PEX7O00628 323 aa11.41□□□□□ -0.58
SDF4-204ENST00000459994 PDE6DO43924 150 aa11.41□□□□□ -0.58
SDF4-204ENST00000459994 DUSP14O95147 198 aaKnown RBP11.41□□□□□ -0.58
SDF4-204ENST00000459994 HLA-DRB4P13762 266 aa11.41□□□□□ -0.58
SDF4-204ENST00000459994 DEFB1P60022 68 aa11.41□□□□□ -0.58
SDF4-204ENST00000459994 GNG5P63218 68 aa11.41□□□□□ -0.58
SDF4-204ENST00000459994 OR10J6PQ8NGY7 276 aa11.41□□□□□ -0.58
SDF4-204ENST00000459994 C11orf52Q96A22 123 aa11.41□□□□□ -0.58
SDF4-204ENST00000459994 CLUHP3Q96NS8 147 aa11.41□□□□□ -0.58
SDF4-204ENST00000459994 EIF5A2Q9GZV4 153 aaKnown RBP11.41□□□□□ -0.58
SDF4-204ENST00000459994 SMDT1Q9H4I9 107 aa11.41□□□□□ -0.58
SDF4-204ENST00000459994 HLA-DRB4X5D2U9 266 aa11.41□□□□□ -0.58
SDF4-204ENST00000459994 LINC00862A6NCI5 91 aa11.4□□□□□ -0.58
SDF4-204ENST00000459994 KNCNA6PVL3 124 aa11.4□□□□□ -0.58
SDF4-204ENST00000459994 A8MTW9 85 aa11.4□□□□□ -0.58
SDF4-204ENST00000459994 NPIPB6E9PJ23 425 aa11.4□□□□□ -0.58
SDF4-204ENST00000459994 F6UB75 175 aa11.4□□□□□ -0.58
SDF4-204ENST00000459994 H3BMM0 161 aa11.4□□□□□ -0.58
SDF4-204ENST00000459994 K7EQM0 130 aa11.4□□□□□ -0.58
SDF4-204ENST00000459994 PEA15Q15121 130 aa11.4□□□□□ -0.58
SDF4-204ENST00000459994 ACTL10Q5JWF8 245 aa11.4□□□□□ -0.58
SDF4-204ENST00000459994 C9orf47Q6ZRZ4 202 aa11.4□□□□□ -0.58
SDF4-204ENST00000459994 GOLT1AQ6ZVE7 132 aa11.4□□□□□ -0.58
SDF4-204ENST00000459994 CYB561D1Q8N8Q1 229 aa11.4□□□□□ -0.58
SDF4-204ENST00000459994 EPPK1P58107 5090 aaKnown RBP11.39□□□□□ -0.59
SDF4-204ENST00000459994 IGKV2-40A0A087WW87 121 aaPredicted RBP11.39□□□□□ -0.59
SDF4-204ENST00000459994 A0A0J9YWU9 116 aa11.39□□□□□ -0.59
SDF4-204ENST00000459994 FBLL1A6NHQ2 334 aaKnown RBP11.39□□□□□ -0.59
SDF4-204ENST00000459994 TMEM250H0YL14 139 aa11.39□□□□□ -0.59
SDF4-204ENST00000459994 IGKV2D-40P01614 121 aaPredicted RBP11.39□□□□□ -0.59
SDF4-204ENST00000459994 HIST1H1AQ02539 215 aaPredicted RBP11.39□□□□□ -0.59
SDF4-204ENST00000459994 GDF5OSQ5U4N7 250 aa11.39□□□□□ -0.59
SDF4-204ENST00000459994 LINC00477Q96M19 166 aa11.39□□□□□ -0.59
SDF4-204ENST00000459994 RPH3ALQ9UNE2 315 aa11.39□□□□□ -0.59
SDF4-204ENST00000459994 KLF12Q9Y4X4 402 aa11.39□□□□□ -0.59
SDF4-204ENST00000459994 SCO2A0A1W2PP80 73 aa11.38□□□□□ -0.59
SDF4-204ENST00000459994 S100A9P06702 114 aaKnown RBP11.38□□□□□ -0.59
SDF4-204ENST00000459994 CNN1P51911 297 aaKnown RBP11.38□□□□□ -0.59
SDF4-204ENST00000459994 TMEM75Q8N9X5 138 aa11.38□□□□□ -0.59
SDF4-204ENST00000459994 IL17DQ8TAD2 202 aa11.38□□□□□ -0.59
SDF4-204ENST00000459994 C2CD4CQ8TF44 421 aa11.38□□□□□ -0.59
SDF4-204ENST00000459994 VGLL1Q99990 258 aa11.38□□□□□ -0.59
SDF4-204ENST00000459994 AGPAT4-IT1Q9H0P7 198 aa11.38□□□□□ -0.59
SDF4-204ENST00000459994 PPP1R14DQ9NXH3 145 aa11.38□□□□□ -0.59
SDF4-204ENST00000459994 TRBV6-1A0A0K0K1D8 114 aa11.37□□□□□ -0.59
SDF4-204ENST00000459994 SPRY2O43597 315 aa11.37□□□□□ -0.59
SDF4-204ENST00000459994 SRP19P09132 144 aaKnown RBP11.37□□□□□ -0.59
SDF4-204ENST00000459994 ZNF705DP0CH99 300 aaPredicted RBP11.37□□□□□ -0.59
SDF4-204ENST00000459994 ZNF705BP0CI00 300 aaPredicted RBP11.37□□□□□ -0.59
SDF4-204ENST00000459994 AKR1C3P42330 323 aa11.37□□□□□ -0.59
SDF4-204ENST00000459994 ERCC8Q13216 396 aa11.37□□□□□ -0.59
SDF4-204ENST00000459994 TMEM78Q5T7P6 136 aa11.37□□□□□ -0.59
SDF4-204ENST00000459994 TRPT1Q86TN4 253 aaKnown RBP11.37□□□□□ -0.59
SDF4-204ENST00000459994 STHQ8IWL8 128 aa11.37□□□□□ -0.59
SDF4-204ENST00000459994 ODF3Q96PU9 254 aa11.37□□□□□ -0.59
SDF4-204ENST00000459994 TRBV7-9A0A0J9YWB2 115 aa11.36□□□□□ -0.59
SDF4-204ENST00000459994 IGLV2-11P01706 119 aa11.36□□□□□ -0.59
SDF4-204ENST00000459994 PRB4P10163 310 aaPredicted RBP11.36□□□□□ -0.59
SDF4-204ENST00000459994 ZNF138P52744 262 aa11.36□□□□□ -0.59
SDF4-204ENST00000459994 APOC4P55056 127 aa11.36□□□□□ -0.59
SDF4-204ENST00000459994 SRSF3P84103 164 aaKnown RBP11.36□□□□□ -0.59
SDF4-204ENST00000459994 TMEM183BQ1AE95 376 aa11.36□□□□□ -0.59
SDF4-204ENST00000459994 AMTNQ6UX39 209 aa11.36□□□□□ -0.59
SDF4-204ENST00000459994 Q6ZWC4 215 aa11.36□□□□□ -0.59
SDF4-204ENST00000459994 EIF4E3Q8N5X7 224 aaKnown RBP11.36□□□□□ -0.59
SDF4-204ENST00000459994 OR4B1Q8NGF8 309 aa11.36□□□□□ -0.59
SDF4-204ENST00000459994 RNF183Q96D59 192 aa11.36□□□□□ -0.59
SDF4-204ENST00000459994 FMC1Q96HJ9 113 aa11.36□□□□□ -0.59
SDF4-204ENST00000459994 ZNF492Q9P255 531 aa11.36□□□□□ -0.59
SDF4-204ENST00000459994 LENEPQ9Y5L5 61 aa11.36□□□□□ -0.59
SDF4-204ENST00000459994 CT45A10P0DMU9 189 aa11.35□□□□□ -0.59
SDF4-204ENST00000459994 TAS2R60P59551 318 aa11.35□□□□□ -0.59
SDF4-204ENST00000459994 FLI1Q01543 452 aaPredicted RBP11.35□□□□□ -0.59
SDF4-204ENST00000459994 UQCC3Q6UW78 93 aa11.35□□□□□ -0.59
SDF4-204ENST00000459994 LINC00479Q96M42 142 aa11.35□□□□□ -0.59
SDF4-204ENST00000459994 PSG8Q9UQ74 426 aa11.35□□□□□ -0.59
SDF4-204ENST00000459994 TRAV8-1A0A0A6YYK1 113 aa11.34□□□□□ -0.59
SDF4-204ENST00000459994 TRAV34A0A0B4J273 112 aa11.34□□□□□ -0.59
SDF4-204ENST00000459994 KIR2DL5BA0A0G2JN68 375 aa11.34□□□□□ -0.59
SDF4-204ENST00000459994 KIR2DL5BA0A0G2JPC4 375 aa11.34□□□□□ -0.59
SDF4-204ENST00000459994 C9JQL5 133 aa11.34□□□□□ -0.59
SDF4-204ENST00000459994 UBE2G1P62253 170 aa11.34□□□□□ -0.59
SDF4-204ENST00000459994 MORN3Q6PF18 240 aaPredicted RBP11.34□□□□□ -0.59
SDF4-204ENST00000459994 COMMD7Q86VX2 200 aa11.34□□□□□ -0.59
SDF4-204ENST00000459994 KIR2DL5AQ8N109 375 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms