RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 Q9H3A6 140 aa7.28□□□□□ -1.24
RFX3-210ENST00000457373 C11orf68Q9H3H3 251 aaKnown RBP7.28□□□□□ -1.24
RFX3-210ENST00000457373 COL7A1Q02388 2944 aa7.27□□□□□ -1.25
RFX3-210ENST00000457373 IGKV2-40A0A087WW87 121 aaPredicted RBP7.27□□□□□ -1.25
RFX3-210ENST00000457373 PGPA6NDG6 321 aa7.27□□□□□ -1.25
RFX3-210ENST00000457373 CXorf65A6NEN9 183 aa7.27□□□□□ -1.25
RFX3-210ENST00000457373 NPIPB6E9PJ23 425 aa7.27□□□□□ -1.25
RFX3-210ENST00000457373 PFDN1O60925 122 aa7.27□□□□□ -1.25
RFX3-210ENST00000457373 IGKV2D-40P01614 121 aaPredicted RBP7.27□□□□□ -1.25
RFX3-210ENST00000457373 HBE1P02100 147 aa7.27□□□□□ -1.25
RFX3-210ENST00000457373 ARL14EPLP0DKL9 152 aa7.27□□□□□ -1.25
RFX3-210ENST00000457373 CT45A10P0DMU9 189 aa7.27□□□□□ -1.25
RFX3-210ENST00000457373 CSN1S1P47710 185 aa7.27□□□□□ -1.25
RFX3-210ENST00000457373 EMP1P54849 157 aa7.27□□□□□ -1.25
RFX3-210ENST00000457373 NANOS2P60321 138 aaKnown RBP7.27□□□□□ -1.25
RFX3-210ENST00000457373 AKR1C8PQ5T2L2 129 aa7.27□□□□□ -1.25
RFX3-210ENST00000457373 TMUB2Q71RG4 321 aa7.27□□□□□ -1.25
RFX3-210ENST00000457373 SSX7Q7RTT5 188 aa7.27□□□□□ -1.25
RFX3-210ENST00000457373 IQCF2Q8IXL9 164 aa7.27□□□□□ -1.25
RFX3-210ENST00000457373 LYPD1Q8N2G4 141 aa7.27□□□□□ -1.25
RFX3-210ENST00000457373 HYLS1Q96M11 299 aa7.27□□□□□ -1.25
RFX3-210ENST00000457373 NEU1Q99519 415 aa7.27□□□□□ -1.25
RFX3-210ENST00000457373 AGPAT4-IT1Q9H0P7 198 aa7.27□□□□□ -1.25
RFX3-210ENST00000457373 RPH3ALQ9UNE2 315 aa7.27□□□□□ -1.25
RFX3-210ENST00000457373 SMIM9A6NGZ8 99 aa7.26□□□□□ -1.25
RFX3-210ENST00000457373 BCL2L11O43521 198 aa7.26□□□□□ -1.25
RFX3-210ENST00000457373 PRM2P04554 102 aa7.26□□□□□ -1.25
RFX3-210ENST00000457373 HTN1P15515 57 aa7.26□□□□□ -1.25
RFX3-210ENST00000457373 GCHFRP30047 84 aa7.26□□□□□ -1.25
RFX3-210ENST00000457373 TSPOP30536 169 aa7.26□□□□□ -1.25
RFX3-210ENST00000457373 LEPP41159 167 aa7.26□□□□□ -1.25
RFX3-210ENST00000457373 RRN3P1Q2M238 152 aa7.26□□□□□ -1.25
RFX3-210ENST00000457373 TMEM78Q5T7P6 136 aa7.26□□□□□ -1.25
RFX3-210ENST00000457373 TCTE3Q8IZS6 198 aa7.26□□□□□ -1.25
RFX3-210ENST00000457373 CMTM2Q8TAZ6 248 aa7.26□□□□□ -1.25
RFX3-210ENST00000457373 LINC00477Q96M19 166 aa7.26□□□□□ -1.25
RFX3-210ENST00000457373 LINC01587Q99440 93 aa7.26□□□□□ -1.25
RFX3-210ENST00000457373 VGLL1Q99990 258 aa7.26□□□□□ -1.25
RFX3-210ENST00000457373 TENM3Q9P273 2699 aa7.26□□□□□ -1.25
RFX3-210ENST00000457373 CTXND1A0A1B0GTU2 59 aa7.25□□□□□ -1.25
RFX3-210ENST00000457373 LOC102723971A0A1B0GUV8 181 aa7.25□□□□□ -1.25
RFX3-210ENST00000457373 ZNF705GA8MUZ8 300 aaPredicted RBP7.25□□□□□ -1.25
RFX3-210ENST00000457373 DIRC3C9JPN6 131 aa7.25□□□□□ -1.25
RFX3-210ENST00000457373 CXorf1O96002 111 aa7.25□□□□□ -1.25
RFX3-210ENST00000457373 ZNF726P1Q15940 193 aa7.25□□□□□ -1.25
RFX3-210ENST00000457373 FAM74A1Q5RGS3 127 aa7.25□□□□□ -1.25
RFX3-210ENST00000457373 C9orf47Q6ZRZ4 202 aa7.25□□□□□ -1.25
RFX3-210ENST00000457373 AKAP14Q86UN6 197 aa7.25□□□□□ -1.25
RFX3-210ENST00000457373 RXFP4Q8TDU9 374 aa7.25□□□□□ -1.25
RFX3-210ENST00000457373 OTORQ9NRC9 128 aa7.25□□□□□ -1.25
RFX3-210ENST00000457373 CELA1Q9UNI1 258 aa7.25□□□□□ -1.25
RFX3-210ENST00000457373 TRAV12-3A0A0B4J271 114 aa7.24□□□□□ -1.25
RFX3-210ENST00000457373 A0A1B0GVG6 124 aa7.24□□□□□ -1.25
RFX3-210ENST00000457373 TMEM189A5PLL7 270 aa7.24□□□□□ -1.25
RFX3-210ENST00000457373 C1QBP02746 253 aa7.24□□□□□ -1.25
RFX3-210ENST00000457373 SLC25A5P05141 298 aaKnown RBP7.24□□□□□ -1.25
RFX3-210ENST00000457373 SEC11BP0C7V7 166 aa7.24□□□□□ -1.25
RFX3-210ENST00000457373 GYPEP15421 78 aa7.24□□□□□ -1.25
RFX3-210ENST00000457373 AZU1P20160 251 aa7.24□□□□□ -1.25
RFX3-210ENST00000457373 FGF8P55075 233 aaPredicted RBP7.24□□□□□ -1.25
RFX3-210ENST00000457373 GNG5P63218 68 aa7.24□□□□□ -1.25
RFX3-210ENST00000457373 EIF5AP63241 154 aaKnown RBP7.24□□□□□ -1.25
RFX3-210ENST00000457373 LGALSLQ3ZCW2 172 aaPredicted RBP7.24□□□□□ -1.25
RFX3-210ENST00000457373 GFI1BQ5VTD9 330 aa7.24□□□□□ -1.25
RFX3-210ENST00000457373 ZNF767PQ75MW2 155 aa7.24□□□□□ -1.25
RFX3-210ENST00000457373 PHLDA1Q8WV24 401 aaPredicted RBP7.24□□□□□ -1.25
RFX3-210ENST00000457373 ODF3Q96PU9 254 aa7.24□□□□□ -1.25
RFX3-210ENST00000457373 TMPRSS5Q9H3S3 457 aa7.24□□□□□ -1.25
RFX3-210ENST00000457373 TMEM167BQ9NRX6 74 aa7.24□□□□□ -1.25
RFX3-210ENST00000457373 ZNF492Q9P255 531 aa7.24□□□□□ -1.25
RFX3-210ENST00000457373 RBAKDNA6NC62 111 aa7.23□□□□□ -1.25
RFX3-210ENST00000457373 PRSS47A8MTI9 375 aa7.23□□□□□ -1.25
RFX3-210ENST00000457373 GPX1P07203 203 aa7.23□□□□□ -1.25
RFX3-210ENST00000457373 TPT1P13693 172 aaKnown RBP7.23□□□□□ -1.25
RFX3-210ENST00000457373 ZNF138P52744 262 aa7.23□□□□□ -1.25
RFX3-210ENST00000457373 CD300CQ08708 224 aa7.23□□□□□ -1.25
RFX3-210ENST00000457373 BTN1A1Q13410 526 aa7.23□□□□□ -1.25
RFX3-210ENST00000457373 CEMP1Q6PRD7 247 aaPredicted RBP7.23□□□□□ -1.25
RFX3-210ENST00000457373 TMEM256Q8N2U0 113 aa7.23□□□□□ -1.25
RFX3-210ENST00000457373 Q8TAT8 98 aa7.23□□□□□ -1.25
RFX3-210ENST00000457373 SUN5Q8TC36 379 aa7.23□□□□□ -1.25
RFX3-210ENST00000457373 C20orf144Q9BQM9 153 aa7.23□□□□□ -1.25
RFX3-210ENST00000457373 YTHDF2Q9Y5A9 579 aaKnown RBP7.23□□□□□ -1.25
RFX3-210ENST00000457373 A0A087WWL8 130 aa7.22□□□□□ -1.25
RFX3-210ENST00000457373 C7orf71A4D174 169 aa7.22□□□□□ -1.25
RFX3-210ENST00000457373 MAP1LC3B2A6NCE7 125 aa7.22□□□□□ -1.25
RFX3-210ENST00000457373 NUPR2A6NF83 97 aa7.22□□□□□ -1.25
RFX3-210ENST00000457373 H7BYZ3 331 aa7.22□□□□□ -1.25
RFX3-210ENST00000457373 TNFRSF6BO95407 300 aa7.22□□□□□ -1.25
RFX3-210ENST00000457373 SPART-AS1P0CW21 52 aa7.22□□□□□ -1.25
RFX3-210ENST00000457373 RNASE4P34096 147 aaKnown RBP7.22□□□□□ -1.25
RFX3-210ENST00000457373 FHITP49789 147 aa7.22□□□□□ -1.25
RFX3-210ENST00000457373 TAS2R60P59551 318 aa7.22□□□□□ -1.25
RFX3-210ENST00000457373 UBE2G2P60604 165 aa7.22□□□□□ -1.25
RFX3-210ENST00000457373 SRSF3P84103 164 aaKnown RBP7.22□□□□□ -1.25
RFX3-210ENST00000457373 C12orf74Q32Q52 190 aa7.22□□□□□ -1.25
RFX3-210ENST00000457373 FAM222AQ5U5X8 452 aa7.22□□□□□ -1.25
RFX3-210ENST00000457373 Q6ZTC4 211 aa7.22□□□□□ -1.25
RFX3-210ENST00000457373 GOLT1AQ6ZVE7 132 aa7.22□□□□□ -1.25
RFX3-210ENST00000457373 NUDT10Q8NFP7 164 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms