RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 GABARAPO95166 117 aa2.38□□□□□ -2.03
RBM39-220ENST00000455343 RPL7P18124 248 aaKnown RBP2.38□□□□□ -2.03
RBM39-220ENST00000455343 GATA2P23769 480 aaPredicted RBP2.38□□□□□ -2.03
RBM39-220ENST00000455343 TCL1AP56279 114 aa2.38□□□□□ -2.03
RBM39-220ENST00000455343 PLP1P60201 277 aa2.38□□□□□ -2.03
RBM39-220ENST00000455343 FGL1Q08830 312 aa2.38□□□□□ -2.03
RBM39-220ENST00000455343 MEF2DQ14814 521 aa2.38□□□□□ -2.03
RBM39-220ENST00000455343 CTF1Q16619 201 aa2.38□□□□□ -2.03
RBM39-220ENST00000455343 ACOT6Q3I5F7 207 aaPredicted RBP2.38□□□□□ -2.03
RBM39-220ENST00000455343 LINC01620Q4KN68 170 aa2.38□□□□□ -2.03
RBM39-220ENST00000455343 IBA57Q5T440 356 aaKnown RBP2.38□□□□□ -2.03
RBM39-220ENST00000455343 GPR107Q5VW38 600 aa2.38□□□□□ -2.03
RBM39-220ENST00000455343 STEAP1BQ6NZ63 245 aa2.38□□□□□ -2.03
RBM39-220ENST00000455343 Q6ZRU5 148 aa2.38□□□□□ -2.03
RBM39-220ENST00000455343 ACOT7LQ6ZUV0 252 aa2.38□□□□□ -2.03
RBM39-220ENST00000455343 SELENOHQ8IZQ5 122 aaKnown RBP2.38□□□□□ -2.03
RBM39-220ENST00000455343 LGI3Q8N145 548 aa2.38□□□□□ -2.03
RBM39-220ENST00000455343 ZNF738Q8NE65 137 aa2.38□□□□□ -2.03
RBM39-220ENST00000455343 ZNF680Q8NEM1 530 aa2.38□□□□□ -2.03
RBM39-220ENST00000455343 TERB2Q8NHR7 220 aa2.38□□□□□ -2.03
RBM39-220ENST00000455343 DTD1Q8TEA8 209 aa2.38□□□□□ -2.03
RBM39-220ENST00000455343 SLC35E1Q96K37 410 aa2.38□□□□□ -2.03
RBM39-220ENST00000455343 ODF3Q96PU9 254 aa2.38□□□□□ -2.03
RBM39-220ENST00000455343 RTBDNQ9BSG5 229 aaPredicted RBP2.38□□□□□ -2.03
RBM39-220ENST00000455343 SHANK2-AS3Q9BTD1 123 aa2.38□□□□□ -2.03
RBM39-220ENST00000455343 ZNF331Q9NQX6 463 aaPredicted RBP2.38□□□□□ -2.03
RBM39-220ENST00000455343 PPP1R14DQ9NXH3 145 aa2.38□□□□□ -2.03
RBM39-220ENST00000455343 COPZ2Q9P299 210 aa2.38□□□□□ -2.03
RBM39-220ENST00000455343 SSR3Q9UNL2 185 aa2.38□□□□□ -2.03
RBM39-220ENST00000455343 RCL1Q9Y2P8 373 aaKnown RBP2.38□□□□□ -2.03
RBM39-220ENST00000455343 KLF12Q9Y4X4 402 aa2.38□□□□□ -2.03
RBM39-220ENST00000455343 TMEM56-RWDD3S4R434 201 aa2.38□□□□□ -2.03
RBM39-220ENST00000455343 TRAV12-3A0A0B4J271 114 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 LINC00854A0A1B0GVQ3 168 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 RNF222A6NCQ9 220 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 KLLNB2CW77 178 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 E5RGE8 158 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 ORM1P02763 201 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 SULT1A3P0DMM9 295 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 SULT1A4P0DMN0 295 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 CT45A10P0DMU9 189 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 PRB4P10163 310 aaPredicted RBP2.37□□□□□ -2.03
RBM39-220ENST00000455343 ORM2P19652 201 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 CXCL2P19875 107 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 SRIP30626 198 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 S100A7P31151 101 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 AQP4P55087 323 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 RPL37AP61513 92 aaKnown RBP2.37□□□□□ -2.03
RBM39-220ENST00000455343 LAGE3Q14657 143 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 UBE2NLQ5JXB2 153 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 CROCCP3Q8IVE0 287 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 CCDC71LQ8N9Z2 235 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 BPIFCQ8NFQ6 507 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 OR13C8Q8NGS7 320 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 OR1S1Q8NH92 325 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 RNASE11Q8TAA1 199 aaKnown RBP2.37□□□□□ -2.03
RBM39-220ENST00000455343 ZFAND1Q8TCF1 268 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 BLNKQ8WV28 456 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 FAM19A4Q96LR4 140 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 PAXXQ9BUH6 204 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 TMEM147Q9BVK8 224 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 VCXQ9H320 206 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 NAA60Q9H7X0 242 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 BLOC1S6Q9UL45 172 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 FSIP2Q5CZC0 6907 aa2.37□□□□□ -2.03
RBM39-220ENST00000455343 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.36□□□□□ -2.03
RBM39-220ENST00000455343 A0A0B4J2A0 478 aa2.36□□□□□ -2.03
RBM39-220ENST00000455343 CRYM-AS1A6NIL9 109 aa2.36□□□□□ -2.03
RBM39-220ENST00000455343 PITX3O75364 302 aa2.36□□□□□ -2.03
RBM39-220ENST00000455343 IGHV3-53P01767 116 aa2.36□□□□□ -2.03
RBM39-220ENST00000455343 APOA1P02647 267 aa2.36□□□□□ -2.03
RBM39-220ENST00000455343 CD3DP04234 171 aa2.36□□□□□ -2.03
RBM39-220ENST00000455343 SLC25A5P05141 298 aaKnown RBP2.36□□□□□ -2.03
RBM39-220ENST00000455343 TBPP20226 339 aa2.36□□□□□ -2.03
RBM39-220ENST00000455343 LEPP41159 167 aa2.36□□□□□ -2.03
RBM39-220ENST00000455343 CCR6P51684 374 aa2.36□□□□□ -2.03
RBM39-220ENST00000455343 GABARAPL2P60520 117 aa2.36□□□□□ -2.03
RBM39-220ENST00000455343 CD300CQ08708 224 aa2.36□□□□□ -2.03
RBM39-220ENST00000455343 SURF2Q15527 256 aaPredicted RBP2.36□□□□□ -2.03
RBM39-220ENST00000455343 ZNF876PQ49A33 203 aa2.36□□□□□ -2.03
RBM39-220ENST00000455343 RNASE10Q5GAN6 216 aaKnown RBP2.36□□□□□ -2.03
RBM39-220ENST00000455343 LELP1Q5T871 98 aa2.36□□□□□ -2.03
RBM39-220ENST00000455343 LCN15Q6UWW0 184 aa2.36□□□□□ -2.03
RBM39-220ENST00000455343 PATE2Q6UY27 113 aa2.36□□□□□ -2.03
RBM39-220ENST00000455343 CCDC190Q86UF4 302 aa2.36□□□□□ -2.03
RBM39-220ENST00000455343 EIF4E3Q8N5X7 224 aaKnown RBP2.36□□□□□ -2.03
RBM39-220ENST00000455343 SAMD12Q8N8I0 201 aa2.36□□□□□ -2.03
RBM39-220ENST00000455343 OR4D10Q8NGI6 311 aa2.36□□□□□ -2.03
RBM39-220ENST00000455343 MARCH1Q8TCQ1 289 aa2.36□□□□□ -2.03
RBM39-220ENST00000455343 RASL10AQ92737 203 aa2.36□□□□□ -2.03
RBM39-220ENST00000455343 SAT2Q96F10 170 aaPredicted RBP2.36□□□□□ -2.03
RBM39-220ENST00000455343 TXNDC17Q9BRA2 123 aa2.36□□□□□ -2.03
RBM39-220ENST00000455343 SLC50A1Q9BRV3 221 aa2.36□□□□□ -2.03
RBM39-220ENST00000455343 RBKSQ9H477 322 aa2.36□□□□□ -2.03
RBM39-220ENST00000455343 Q9HAA7 133 aa2.36□□□□□ -2.03
RBM39-220ENST00000455343 DNAJC4Q9NNZ3 241 aa2.36□□□□□ -2.03
RBM39-220ENST00000455343 MTFP1Q9UDX5 166 aa2.36□□□□□ -2.03
RBM39-220ENST00000455343 SHPKQ9UHJ6 478 aa2.36□□□□□ -2.03
RBM39-220ENST00000455343 GPR132Q9UNW8 380 aa2.36□□□□□ -2.03
RBM39-220ENST00000455343 HIGD1AQ9Y241 93 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms