RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 ZNF493Q6ZR52 646 aa9.02□□□□□ -0.97
PRPF40A-203ENST00000448428 LYPD1Q8N2G4 141 aa9.02□□□□□ -0.97
PRPF40A-203ENST00000448428 HSD17B11Q8NBQ5 300 aa9.02□□□□□ -0.97
PRPF40A-203ENST00000448428 TMEM263Q8WUH6 116 aaKnown RBP9.02□□□□□ -0.97
PRPF40A-203ENST00000448428 Q9H3A6 140 aa9.02□□□□□ -0.97
PRPF40A-203ENST00000448428 TIMM8BQ9Y5J9 83 aaPredicted RBP9.02□□□□□ -0.97
PRPF40A-203ENST00000448428 A0A1W2PPV4 95 aa9.01□□□□□ -0.97
PRPF40A-203ENST00000448428 KLLNB2CW77 178 aa9.01□□□□□ -0.97
PRPF40A-203ENST00000448428 RNASE4P34096 147 aaKnown RBP9.01□□□□□ -0.97
PRPF40A-203ENST00000448428 CD300CQ08708 224 aa9.01□□□□□ -0.97
PRPF40A-203ENST00000448428 TMEM78Q5T7P6 136 aa9.01□□□□□ -0.97
PRPF40A-203ENST00000448428 CCDC28AQ8IWP9 274 aa9.01□□□□□ -0.97
PRPF40A-203ENST00000448428 INO80EQ8NBZ0 244 aaPredicted RBP9.01□□□□□ -0.97
PRPF40A-203ENST00000448428 OR10G4Q8NGN3 311 aa9.01□□□□□ -0.97
PRPF40A-203ENST00000448428 OR10G9Q8NGN4 311 aa9.01□□□□□ -0.97
PRPF40A-203ENST00000448428 OR10G7Q8NGN6 311 aa9.01□□□□□ -0.97
PRPF40A-203ENST00000448428 OR2T35Q8NGX2 323 aa9.01□□□□□ -0.97
PRPF40A-203ENST00000448428 FAM210BQ96KR6 192 aa9.01□□□□□ -0.97
PRPF40A-203ENST00000448428 NOP10Q9NPE3 64 aaKnown RBP9.01□□□□□ -0.97
PRPF40A-203ENST00000448428 ZNF492Q9P255 531 aa9.01□□□□□ -0.97
PRPF40A-203ENST00000448428 FXYD6-FXYD2A0A087WZ82 144 aa9□□□□□ -0.97
PRPF40A-203ENST00000448428 C7orf71A4D174 169 aa9□□□□□ -0.97
PRPF40A-203ENST00000448428 RNF222A6NCQ9 220 aa9□□□□□ -0.97
PRPF40A-203ENST00000448428 G3V3Q6 166 aa9□□□□□ -0.97
PRPF40A-203ENST00000448428 HMGB3O15347 200 aaKnown RBP9□□□□□ -0.97
PRPF40A-203ENST00000448428 ZNF324O75467 553 aaPredicted RBP9□□□□□ -0.97
PRPF40A-203ENST00000448428 GPX1P07203 203 aa9□□□□□ -0.97
PRPF40A-203ENST00000448428 NMBP08949 121 aa9□□□□□ -0.97
PRPF40A-203ENST00000448428 CRISP2P16562 243 aa9□□□□□ -0.97
PRPF40A-203ENST00000448428 ATP6V0CP27449 155 aa9□□□□□ -0.97
PRPF40A-203ENST00000448428 CSN1S1P47710 185 aa9□□□□□ -0.97
PRPF40A-203ENST00000448428 BTN1A1Q13410 526 aa9□□□□□ -0.97
PRPF40A-203ENST00000448428 PQLC2Q6ZP29 291 aa9□□□□□ -0.97
PRPF40A-203ENST00000448428 ZFAND2AQ8N6M9 145 aa9□□□□□ -0.97
PRPF40A-203ENST00000448428 OR2G3Q8NGZ4 309 aa9□□□□□ -0.97
PRPF40A-203ENST00000448428 PYGO2Q9BRQ0 406 aa9□□□□□ -0.97
PRPF40A-203ENST00000448428 PSMG3Q9BT73 122 aaPredicted RBP9□□□□□ -0.97
PRPF40A-203ENST00000448428 TNFSF18Q9UNG2 199 aa9□□□□□ -0.97
PRPF40A-203ENST00000448428 CBY3A6NI87 242 aa8.99□□□□□ -0.97
PRPF40A-203ENST00000448428 ZNF138P52744 262 aa8.99□□□□□ -0.97
PRPF40A-203ENST00000448428 PRR9Q5T870 116 aa8.99□□□□□ -0.97
PRPF40A-203ENST00000448428 TMEM88Q6PEY1 159 aa8.99□□□□□ -0.97
PRPF40A-203ENST00000448428 HYLS1Q96M11 299 aa8.99□□□□□ -0.97
PRPF40A-203ENST00000448428 SH3BGRL3Q9H299 93 aa8.99□□□□□ -0.97
PRPF40A-203ENST00000448428 RBAKDNA6NC62 111 aa8.98□□□□□ -0.97
PRPF40A-203ENST00000448428 PGPA6NDG6 321 aa8.98□□□□□ -0.97
PRPF40A-203ENST00000448428 DIRC3C9JPN6 131 aa8.98□□□□□ -0.97
PRPF40A-203ENST00000448428 P0DMU3 169 aa8.98□□□□□ -0.97
PRPF40A-203ENST00000448428 FAM231AP0DMU4 169 aa8.98□□□□□ -0.97
PRPF40A-203ENST00000448428 FAM231CP0DMU5 169 aa8.98□□□□□ -0.97
PRPF40A-203ENST00000448428 CDC34P49427 236 aaPredicted RBP8.98□□□□□ -0.97
PRPF40A-203ENST00000448428 SERF2P84101 59 aa8.98□□□□□ -0.97
PRPF40A-203ENST00000448428 RPL7L1Q6DKI1 246 aaKnown RBP8.98□□□□□ -0.97
PRPF40A-203ENST00000448428 Q6ZQT7 251 aa8.98□□□□□ -0.97
PRPF40A-203ENST00000448428 Q8TAT8 98 aa8.98□□□□□ -0.97
PRPF40A-203ENST00000448428 RXFP4Q8TDU9 374 aa8.98□□□□□ -0.97
PRPF40A-203ENST00000448428 RAB24Q969Q5 203 aa8.98□□□□□ -0.97
PRPF40A-203ENST00000448428 OTORQ9NRC9 128 aa8.98□□□□□ -0.97
PRPF40A-203ENST00000448428 SNURFLB1AK76 121 aa8.97□□□□□ -0.97
PRPF40A-203ENST00000448428 F5H768 121 aa8.97□□□□□ -0.97
PRPF40A-203ENST00000448428 ATP5G1P05496 136 aa8.97□□□□□ -0.97
PRPF40A-203ENST00000448428 STAG3L2P0CL84 134 aa8.97□□□□□ -0.97
PRPF40A-203ENST00000448428 STAG3L3P0CL85 134 aa8.97□□□□□ -0.97
PRPF40A-203ENST00000448428 ARL14EPLP0DKL9 152 aa8.97□□□□□ -0.97
PRPF40A-203ENST00000448428 ATP5G3P48201 142 aa8.97□□□□□ -0.97
PRPF40A-203ENST00000448428 LINC00612Q8N6U2 182 aa8.97□□□□□ -0.97
PRPF40A-203ENST00000448428 POM121L12Q8N7R1 296 aa8.97□□□□□ -0.97
PRPF40A-203ENST00000448428 LINC00467Q9BRT7 94 aa8.97□□□□□ -0.97
PRPF40A-203ENST00000448428 BORCS7-ASMTA0A0B4J1R7 106 aa8.96□□□□□ -0.98
PRPF40A-203ENST00000448428 TRBV7-9A0A0J9YWB2 115 aa8.96□□□□□ -0.98
PRPF40A-203ENST00000448428 SMLR1H3BR10 107 aa8.96□□□□□ -0.98
PRPF40A-203ENST00000448428 MBP02144 154 aa8.96□□□□□ -0.98
PRPF40A-203ENST00000448428 DAZ2Q13117 558 aaKnown RBP8.96□□□□□ -0.98
PRPF40A-203ENST00000448428 ANXA2RQ3ZCQ2 193 aa8.96□□□□□ -0.98
PRPF40A-203ENST00000448428 EIF4E3Q8N5X7 224 aaKnown RBP8.96□□□□□ -0.98
PRPF40A-203ENST00000448428 C11orf72Q8NBR9 251 aa8.96□□□□□ -0.98
PRPF40A-203ENST00000448428 CMTM2Q8TAZ6 248 aa8.96□□□□□ -0.98
PRPF40A-203ENST00000448428 GNPNAT1Q96EK6 184 aaPredicted RBP8.96□□□□□ -0.98
PRPF40A-203ENST00000448428 GSN-AS1Q9NRJ2 163 aa8.96□□□□□ -0.98
PRPF40A-203ENST00000448428 GAGE12BA1L429 117 aa8.95□□□□□ -0.98
PRPF40A-203ENST00000448428 ARPC5O15511 151 aa8.95□□□□□ -0.98
PRPF40A-203ENST00000448428 GAGE7O76087 117 aa8.95□□□□□ -0.98
PRPF40A-203ENST00000448428 GAGE12FP0CL80 117 aa8.95□□□□□ -0.98
PRPF40A-203ENST00000448428 GAGE12GP0CL81 117 aa8.95□□□□□ -0.98
PRPF40A-203ENST00000448428 GAGE12IP0CL82 117 aa8.95□□□□□ -0.98
PRPF40A-203ENST00000448428 GCHFRP30047 84 aa8.95□□□□□ -0.98
PRPF40A-203ENST00000448428 FAM74A1Q5RGS3 127 aa8.95□□□□□ -0.98
PRPF40A-203ENST00000448428 ARL6IP6Q8N6S5 226 aa8.95□□□□□ -0.98
PRPF40A-203ENST00000448428 SUN5Q8TC36 379 aa8.95□□□□□ -0.98
PRPF40A-203ENST00000448428 ACTR3CQ9C0K3 210 aaPredicted RBP8.95□□□□□ -0.98
PRPF40A-203ENST00000448428 TP53TG3Q9ULZ0 132 aa8.95□□□□□ -0.98
PRPF40A-203ENST00000448428 RPH3ALQ9UNE2 315 aa8.95□□□□□ -0.98
PRPF40A-203ENST00000448428 KMT2AQ03164 3969 aa8.95□□□□□ -0.98
PRPF40A-203ENST00000448428 IGHV1OR15-1A0A075B7D0 117 aa8.94□□□□□ -0.98
PRPF40A-203ENST00000448428 RGS13O14921 159 aa8.94□□□□□ -0.98
PRPF40A-203ENST00000448428 Q6ZTI0 123 aa8.94□□□□□ -0.98
PRPF40A-203ENST00000448428 GOLT1AQ6ZVE7 132 aa8.94□□□□□ -0.98
PRPF40A-203ENST00000448428 SSX7Q7RTT5 188 aa8.94□□□□□ -0.98
PRPF40A-203ENST00000448428 C15orf53Q8NAA6 179 aa8.94□□□□□ -0.98
PRPF40A-203ENST00000448428 ZNF680Q8NEM1 530 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms