RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 LY6DQ14210 128 aa13.17□□□□□ -0.3
TCOF1-206ENST00000445265 VCX2Q9H322 139 aa13.17□□□□□ -0.3
TCOF1-206ENST00000445265 I3L2K1 104 aa13.16□□□□□ -0.3
TCOF1-206ENST00000445265 ZNF418Q8TF45 676 aaPredicted RBP13.16□□□□□ -0.3
TCOF1-206ENST00000445265 IGLV2-23P01705 113 aa13.16□□□□□ -0.3
TCOF1-206ENST00000445265 RNF182Q8N6D2 247 aa13.16□□□□□ -0.3
TCOF1-206ENST00000445265 H3BUX3 64 aa13.16□□□□□ -0.3
TCOF1-206ENST00000445265 TGFAP01135 160 aa13.16□□□□□ -0.3
TCOF1-206ENST00000445265 PRSS57Q6UWY2 283 aa13.16□□□□□ -0.3
TCOF1-206ENST00000445265 ARL6IP6Q8N6S5 226 aa13.16□□□□□ -0.3
TCOF1-206ENST00000445265 PRSS33Q8NF86 280 aa13.16□□□□□ -0.3
TCOF1-206ENST00000445265 ZNF503Q96F45 646 aa13.16□□□□□ -0.3
TCOF1-206ENST00000445265 DUX3Q96PT4 197 aa13.16□□□□□ -0.3
TCOF1-206ENST00000445265 C14orf178Q8N769 122 aaPredicted RBP13.16□□□□□ -0.3
TCOF1-206ENST00000445265 Q8N8P6 123 aa13.16□□□□□ -0.3
TCOF1-206ENST00000445265 MRAP2Q96G30 205 aa13.16□□□□□ -0.3
TCOF1-206ENST00000445265 CHAC1Q9BUX1 264 aa13.16□□□□□ -0.3
TCOF1-206ENST00000445265 ZNF747Q9BV97 191 aa13.16□□□□□ -0.3
TCOF1-206ENST00000445265 MSRB2Q9Y3D2 182 aa13.16□□□□□ -0.3
TCOF1-206ENST00000445265 CPAMD8Q8IZJ3 1885 aa13.16□□□□□ -0.3
TCOF1-206ENST00000445265 FRMD6-AS1P0C7T7 363 aa13.15□□□□□ -0.3
TCOF1-206ENST00000445265 C1orf122Q6ZSJ8 110 aa13.15□□□□□ -0.3
TCOF1-206ENST00000445265 CD300EQ496F6 205 aaPredicted RBP13.15□□□□□ -0.3
TCOF1-206ENST00000445265 BRD3OSQ6XYD6 125 aa13.15□□□□□ -0.3
TCOF1-206ENST00000445265 E7EUB6 86 aa13.15□□□□□ -0.3
TCOF1-206ENST00000445265 IL17RELQ6ZVW7 336 aa13.15□□□□□ -0.3
TCOF1-206ENST00000445265 OR11H6Q8NGC7 330 aa13.15□□□□□ -0.3
TCOF1-206ENST00000445265 RITA1Q96K30 269 aa13.15□□□□□ -0.3
TCOF1-206ENST00000445265 PRSS22Q9GZN4 317 aa13.15□□□□□ -0.3
TCOF1-206ENST00000445265 COL5A1P20908 1838 aaPredicted RBP13.15□□□□□ -0.3
TCOF1-206ENST00000445265 ATG2AQ2TAZ0 1938 aa13.15□□□□□ -0.3
TCOF1-206ENST00000445265 H3BRM9 83 aa13.14□□□□□ -0.31
TCOF1-206ENST00000445265 K7EIM0 57 aa13.14□□□□□ -0.31
TCOF1-206ENST00000445265 UBE2L6O14933 153 aa13.14□□□□□ -0.31
TCOF1-206ENST00000445265 NPYP01303 97 aa13.14□□□□□ -0.31
TCOF1-206ENST00000445265 SRD5A1P18405 259 aa13.14□□□□□ -0.31
TCOF1-206ENST00000445265 TRGV11A0A075B6L2 103 aa13.14□□□□□ -0.31
TCOF1-206ENST00000445265 IGHV2-70DA0A0C4DH43 119 aa13.14□□□□□ -0.31
TCOF1-206ENST00000445265 BEX4Q9NWD9 120 aaPredicted RBP13.14□□□□□ -0.31
TCOF1-206ENST00000445265 MRPL36Q9P0J6 103 aaKnown RBP13.14□□□□□ -0.31
TCOF1-206ENST00000445265 G3V318 75 aa13.13□□□□□ -0.31
TCOF1-206ENST00000445265 VCYO14598 125 aa13.13□□□□□ -0.31
TCOF1-206ENST00000445265 FAM120AOSQ5T036 256 aa13.13□□□□□ -0.31
TCOF1-206ENST00000445265 BVES-AS1Q5T3Y7 98 aa13.13□□□□□ -0.31
TCOF1-206ENST00000445265 VGLL1Q99990 258 aa13.13□□□□□ -0.31
TCOF1-206ENST00000445265 IGLV1-47P01700 117 aa13.13□□□□□ -0.31
TCOF1-206ENST00000445265 RRN3P1Q2M238 152 aa13.13□□□□□ -0.31
TCOF1-206ENST00000445265 RHPN1-AS1Q9BWJ2 59 aa13.13□□□□□ -0.31
TCOF1-206ENST00000445265 PRO3102Q9H379 93 aa13.13□□□□□ -0.31
TCOF1-206ENST00000445265 CRYGCP07315 174 aa13.13□□□□□ -0.31
TCOF1-206ENST00000445265 GAGE13Q4V321 117 aa13.13□□□□□ -0.31
TCOF1-206ENST00000445265 MTURNQ8N3F0 131 aa13.13□□□□□ -0.31
TCOF1-206ENST00000445265 C8orf86Q6ZUL3 223 aa13.12□□□□□ -0.31
TCOF1-206ENST00000445265 CSTL1Q9H114 145 aa13.12□□□□□ -0.31
TCOF1-206ENST00000445265 CENPFP49454 3210 aa13.12□□□□□ -0.31
TCOF1-206ENST00000445265 SPOCK3Q9BQ16 436 aa13.12□□□□□ -0.31
TCOF1-206ENST00000445265 TMEM8BA6NDV4 472 aa13.11□□□□□ -0.31
TCOF1-206ENST00000445265 CST9LQ9H4G1 147 aa13.11□□□□□ -0.31
TCOF1-206ENST00000445265 PEMTQ9UBM1 199 aa13.11□□□□□ -0.31
TCOF1-206ENST00000445265 GTSF1Q8WW33 167 aa13.11□□□□□ -0.31
TCOF1-206ENST00000445265 DAZ1Q9NQZ3 744 aaKnown RBP13.11□□□□□ -0.31
TCOF1-206ENST00000445265 A0A1B0GV72 72 aa13.11□□□□□ -0.31
TCOF1-206ENST00000445265 SUMO2P61956 95 aaKnown RBP13.11□□□□□ -0.31
TCOF1-206ENST00000445265 MEIG1Q5JSS6 88 aa13.11□□□□□ -0.31
TCOF1-206ENST00000445265 NPBQ8NG41 125 aa13.11□□□□□ -0.31
TCOF1-206ENST00000445265 ARFGEF3Q5TH69 2177 aa13.11□□□□□ -0.31
TCOF1-206ENST00000445265 UTF1Q5T230 341 aa13.11□□□□□ -0.31
TCOF1-206ENST00000445265 C9orf118A6NHY6 69 aa13.1□□□□□ -0.31
TCOF1-206ENST00000445265 IGLV2-8P01709 118 aa13.1□□□□□ -0.31
TCOF1-206ENST00000445265 DSCR9P59020 149 aa13.1□□□□□ -0.31
TCOF1-206ENST00000445265 B4DSR2 109 aa13.1□□□□□ -0.31
TCOF1-206ENST00000445265 TEX22C9J3V5 150 aa13.1□□□□□ -0.31
TCOF1-206ENST00000445265 RIPPLY3P57055 190 aa13.1□□□□□ -0.31
TCOF1-206ENST00000445265 C1orf229Q6ZS94 237 aaPredicted RBP13.1□□□□□ -0.31
TCOF1-206ENST00000445265 ZNF688P0C7X2 276 aa13.1□□□□□ -0.31
TCOF1-206ENST00000445265 OCIAD2Q56VL3 154 aa13.1□□□□□ -0.31
TCOF1-206ENST00000445265 LINC01587Q99440 93 aa13.1□□□□□ -0.31
TCOF1-206ENST00000445265 IGKV1D-37A0A075B6S9 117 aa13.1□□□□□ -0.31
TCOF1-206ENST00000445265 FCN3O75636 299 aa13.1□□□□□ -0.31
TCOF1-206ENST00000445265 EGR2P11161 476 aaPredicted RBP13.1□□□□□ -0.31
TCOF1-206ENST00000445265 SFTA2Q6UW10 78 aa13.1□□□□□ -0.31
TCOF1-206ENST00000445265 DYSFO75923 2080 aa13.1□□□□□ -0.31
TCOF1-206ENST00000445265 CEP350Q5VT06 3117 aa13.09□□□□□ -0.31
TCOF1-206ENST00000445265 DTX2Q86UW9 622 aa13.09□□□□□ -0.31
TCOF1-206ENST00000445265 WFDC12Q8WWY7 111 aa13.09□□□□□ -0.31
TCOF1-206ENST00000445265 SELENOKQ9Y6D0 94 aa13.09□□□□□ -0.31
TCOF1-206ENST00000445265 ITLN2Q8WWU7 325 aaPredicted RBP13.09□□□□□ -0.31
TCOF1-206ENST00000445265 IGLV11-55A0A075B6I3 123 aa13.09□□□□□ -0.31
TCOF1-206ENST00000445265 SIVA1O15304 175 aa13.09□□□□□ -0.31
TCOF1-206ENST00000445265 TRAV12-3A0A0B4J271 114 aa13.08□□□□□ -0.32
TCOF1-206ENST00000445265 OTOGLQ3ZCN5 2332 aa13.08□□□□□ -0.32
TCOF1-206ENST00000445265 NDUFS7O75251 213 aa13.08□□□□□ -0.32
TCOF1-206ENST00000445265 SIGMAR1Q99720 223 aa13.08□□□□□ -0.32
TCOF1-206ENST00000445265 BDP1A6H8Y1 2624 aa13.08□□□□□ -0.32
TCOF1-206ENST00000445265 OVOL3O00110 214 aa13.08□□□□□ -0.32
TCOF1-206ENST00000445265 PSMB11A5LHX3 300 aa13.08□□□□□ -0.32
TCOF1-206ENST00000445265 LINC01545Q5VT33 79 aa13.08□□□□□ -0.32
TCOF1-206ENST00000445265 IGHV1-69DA0A0B4J2H0 117 aa13.07□□□□□ -0.32
TCOF1-206ENST00000445265 TRBV6-1A0A0K0K1D8 114 aa13.07□□□□□ -0.32
TCOF1-206ENST00000445265 C19orf71A6NCJ1 209 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms