RNA–Protein interactions for RNA: ENST00000443528.5

ACTB-206, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 569 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-206ENST00000443528 LINC01587Q99440 93 aa11.24□□□□□ -0.61
ACTB-206ENST00000443528 ARPC5LQ9BPX5 153 aa11.24□□□□□ -0.61
ACTB-206ENST00000443528 C20orf144Q9BQM9 153 aa11.24□□□□□ -0.61
ACTB-206ENST00000443528 DKK2Q9UBU2 259 aa11.24□□□□□ -0.61
ACTB-206ENST00000443528 YTHDF2Q9Y5A9 579 aaKnown RBP11.24□□□□□ -0.61
ACTB-206ENST00000443528 SACSQ9NZJ4 4579 aa11.24□□□□□ -0.61
ACTB-206ENST00000443528 LYSTQ99698 3801 aa11.23□□□□□ -0.61
ACTB-206ENST00000443528 PGPA6NDG6 321 aa11.23□□□□□ -0.61
ACTB-206ENST00000443528 SPART-AS1P0CW21 52 aa11.23□□□□□ -0.61
ACTB-206ENST00000443528 TAS2R60P59551 318 aa11.23□□□□□ -0.61
ACTB-206ENST00000443528 ZNF726P1Q15940 193 aa11.23□□□□□ -0.61
ACTB-206ENST00000443528 FAM222AQ5U5X8 452 aa11.23□□□□□ -0.61
ACTB-206ENST00000443528 ACTR3CQ9C0K3 210 aaPredicted RBP11.23□□□□□ -0.61
ACTB-206ENST00000443528 OTORQ9NRC9 128 aa11.23□□□□□ -0.61
ACTB-206ENST00000443528 KLK5Q9Y337 293 aaPredicted RBP11.23□□□□□ -0.61
ACTB-206ENST00000443528 PLAC8L1A1L4L8 177 aa11.22□□□□□ -0.61
ACTB-206ENST00000443528 KLLNB2CW77 178 aa11.22□□□□□ -0.61
ACTB-206ENST00000443528 DIRC3C9JPN6 131 aa11.22□□□□□ -0.61
ACTB-206ENST00000443528 C11orf94C9JXX5 98 aa11.22□□□□□ -0.61
ACTB-206ENST00000443528 H7BYZ3 331 aa11.22□□□□□ -0.61
ACTB-206ENST00000443528 GCHFRP30047 84 aa11.22□□□□□ -0.61
ACTB-206ENST00000443528 CSN1S1P47710 185 aa11.22□□□□□ -0.61
ACTB-206ENST00000443528 TMEM78Q5T7P6 136 aa11.22□□□□□ -0.61
ACTB-206ENST00000443528 HYLS1Q96M11 299 aa11.22□□□□□ -0.61
ACTB-206ENST00000443528 PLA2G2EQ9NZK7 142 aa11.22□□□□□ -0.61
ACTB-206ENST00000443528 ZNF492Q9P255 531 aa11.22□□□□□ -0.61
ACTB-206ENST00000443528 TRAV12-3A0A0B4J271 114 aa11.21□□□□□ -0.61
ACTB-206ENST00000443528 A0A0D9SG52 128 aa11.21□□□□□ -0.61
ACTB-206ENST00000443528 RBAKDNA6NC62 111 aa11.21□□□□□ -0.61
ACTB-206ENST00000443528 SLC25A5P05141 298 aaKnown RBP11.21□□□□□ -0.61
ACTB-206ENST00000443528 HTN1P15515 57 aa11.21□□□□□ -0.61
ACTB-206ENST00000443528 CRISP2P16562 243 aa11.21□□□□□ -0.61
ACTB-206ENST00000443528 CD300CQ08708 224 aa11.21□□□□□ -0.61
ACTB-206ENST00000443528 ZFAND2AQ8N6M9 145 aa11.21□□□□□ -0.61
ACTB-206ENST00000443528 Q8TAT8 98 aa11.21□□□□□ -0.61
ACTB-206ENST00000443528 RXFP4Q8TDU9 374 aa11.21□□□□□ -0.61
ACTB-206ENST00000443528 RYR2Q92736 4967 aa11.2□□□□□ -0.62
ACTB-206ENST00000443528 TRAV10A0A0B4J240 114 aa11.2□□□□□ -0.62
ACTB-206ENST00000443528 C7orf71A4D174 169 aa11.2□□□□□ -0.62
ACTB-206ENST00000443528 BCL2L11O43521 198 aa11.2□□□□□ -0.62
ACTB-206ENST00000443528 ZNF324O75467 553 aaPredicted RBP11.2□□□□□ -0.62
ACTB-206ENST00000443528 CXorf1O96002 111 aa11.2□□□□□ -0.62
ACTB-206ENST00000443528 ZNF138P52744 262 aa11.2□□□□□ -0.62
ACTB-206ENST00000443528 BTN1A1Q13410 526 aa11.2□□□□□ -0.62
ACTB-206ENST00000443528 AKR1C8PQ5T2L2 129 aa11.2□□□□□ -0.62
ACTB-206ENST00000443528 PRR9Q5T870 116 aa11.2□□□□□ -0.62
ACTB-206ENST00000443528 TCTE3Q8IZS6 198 aa11.2□□□□□ -0.62
ACTB-206ENST00000443528 CTXND1A0A1B0GTU2 59 aa11.19□□□□□ -0.62
ACTB-206ENST00000443528 TEX48A0A1B0GUV7 120 aa11.19□□□□□ -0.62
ACTB-206ENST00000443528 NMBP08949 121 aa11.19□□□□□ -0.62
ACTB-206ENST00000443528 FAM74A1Q5RGS3 127 aa11.19□□□□□ -0.62
ACTB-206ENST00000443528 ARL6IP6Q8N6S5 226 aa11.19□□□□□ -0.62
ACTB-206ENST00000443528 CMTM2Q8TAZ6 248 aa11.19□□□□□ -0.62
ACTB-206ENST00000443528 RNASE8Q8TDE3 154 aaKnown RBP11.19□□□□□ -0.62
ACTB-206ENST00000443528 C2CD4CQ8TF44 421 aa11.19□□□□□ -0.62
ACTB-206ENST00000443528 NIPSNAP3BQ9BS92 247 aa11.19□□□□□ -0.62
ACTB-206ENST00000443528 hCG_2014768A0A024R1R8 64 aa11.18□□□□□ -0.62
ACTB-206ENST00000443528 DEFB131BA0A096LNP1 70 aa11.18□□□□□ -0.62
ACTB-206ENST00000443528 TRBV7-9A0A0J9YWB2 115 aa11.18□□□□□ -0.62
ACTB-206ENST00000443528 KANTRA0A1W2PQU2 76 aa11.18□□□□□ -0.62
ACTB-206ENST00000443528 GPX1P07203 203 aa11.18□□□□□ -0.62
ACTB-206ENST00000443528 RNASE4P34096 147 aaKnown RBP11.18□□□□□ -0.62
ACTB-206ENST00000443528 GNG5P63218 68 aa11.18□□□□□ -0.62
ACTB-206ENST00000443528 Q6ZQT7 251 aa11.18□□□□□ -0.62
ACTB-206ENST00000443528 ZNF493Q6ZR52 646 aa11.18□□□□□ -0.62
ACTB-206ENST00000443528 TMUB2Q71RG4 321 aa11.18□□□□□ -0.62
ACTB-206ENST00000443528 C16orf74Q96GX8 76 aa11.18□□□□□ -0.62
ACTB-206ENST00000443528 ZNF471Q9BX82 626 aaPredicted RBP11.18□□□□□ -0.62
ACTB-206ENST00000443528 TMEM167BQ9NRX6 74 aa11.18□□□□□ -0.62
ACTB-206ENST00000443528 RPH3ALQ9UNE2 315 aa11.18□□□□□ -0.62
ACTB-206ENST00000443528 DNAH1Q9P2D7 4330 aa11.18□□□□□ -0.62
ACTB-206ENST00000443528 LYRM9A8MSI8 78 aa11.17□□□□□ -0.62
ACTB-206ENST00000443528 IGLL5B9A064 214 aa11.17□□□□□ -0.62
ACTB-206ENST00000443528 SEC11BP0C7V7 166 aa11.17□□□□□ -0.62
ACTB-206ENST00000443528 GOLT1AQ6ZVE7 132 aa11.17□□□□□ -0.62
ACTB-206ENST00000443528 TMEM263Q8WUH6 116 aaKnown RBP11.17□□□□□ -0.62
ACTB-206ENST00000443528 PYGO2Q9BRQ0 406 aa11.17□□□□□ -0.62
ACTB-206ENST00000443528 TMPRSS5Q9H3S3 457 aa11.17□□□□□ -0.62
ACTB-206ENST00000443528 ALMS1Q8TCU4 4167 aa11.17□□□□□ -0.62
ACTB-206ENST00000443528 GGTLC3B5MD39 225 aa11.16□□□□□ -0.62
ACTB-206ENST00000443528 FHITP49789 147 aa11.16□□□□□ -0.62
ACTB-206ENST00000443528 FGF8P55075 233 aaPredicted RBP11.16□□□□□ -0.62
ACTB-206ENST00000443528 DAD1P61803 113 aa11.16□□□□□ -0.62
ACTB-206ENST00000443528 SUMO1P63165 101 aaKnown RBP11.16□□□□□ -0.62
ACTB-206ENST00000443528 LGALSLQ3ZCW2 172 aaPredicted RBP11.16□□□□□ -0.62
ACTB-206ENST00000443528 IQCF2Q8IXL9 164 aa11.16□□□□□ -0.62
ACTB-206ENST00000443528 TMED6Q8WW62 240 aa11.16□□□□□ -0.62
ACTB-206ENST00000443528 LINC00476Q8WZB0 136 aa11.16□□□□□ -0.62
ACTB-206ENST00000443528 LINC00467Q9BRT7 94 aa11.16□□□□□ -0.62
ACTB-206ENST00000443528 APLNQ9ULZ1 77 aa11.16□□□□□ -0.62
ACTB-206ENST00000443528 LENEPQ9Y5L5 61 aa11.16□□□□□ -0.62
ACTB-206ENST00000443528 TRAV8-1A0A0A6YYK1 113 aa11.15□□□□□ -0.62
ACTB-206ENST00000443528 PFDN1O60925 122 aa11.15□□□□□ -0.62
ACTB-206ENST00000443528 C1QBP02746 253 aa11.15□□□□□ -0.62
ACTB-206ENST00000443528 CCDC28AQ8IWP9 274 aa11.15□□□□□ -0.62
ACTB-206ENST00000443528 C5orf17Q8NAS9 161 aa11.15□□□□□ -0.62
ACTB-206ENST00000443528 TIMM8BQ9Y5J9 83 aaPredicted RBP11.15□□□□□ -0.62
ACTB-206ENST00000443528 IGHV4-4A0A075B6R2 117 aa11.14□□□□□ -0.63
ACTB-206ENST00000443528 A0A1W2PRE2 83 aa11.14□□□□□ -0.63
ACTB-206ENST00000443528 MAP1LC3B2A6NCE7 125 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 3043.6 ms