RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 TRBV24-1A0A075B6N3 115 aa16.66■□□□□ 0.26
VSX1-205ENST00000429762 ARL6IP6Q8N6S5 226 aa16.66■□□□□ 0.26
VSX1-205ENST00000429762 TSSC4Q9Y5U2 329 aaPredicted RBP16.66■□□□□ 0.26
VSX1-205ENST00000429762 BMI1P35226 326 aa16.66■□□□□ 0.26
VSX1-205ENST00000429762 KRTAP10-3P60369 221 aa16.66■□□□□ 0.26
VSX1-205ENST00000429762 PYGO2Q9BRQ0 406 aa16.66■□□□□ 0.26
VSX1-205ENST00000429762 MS4A6AQ9H2W1 248 aa16.66■□□□□ 0.26
VSX1-205ENST00000429762 C19orf71A6NCJ1 209 aa16.65■□□□□ 0.26
VSX1-205ENST00000429762 CRIP1P50238 77 aa16.65■□□□□ 0.26
VSX1-205ENST00000429762 OR9G4Q8NGQ1 327 aa16.65■□□□□ 0.26
VSX1-205ENST00000429762 MRPL53Q96EL3 112 aaKnown RBP16.65■□□□□ 0.26
VSX1-205ENST00000429762 PRR25Q96S07 402 aa16.65■□□□□ 0.26
VSX1-205ENST00000429762 AGPAT4-IT1Q9H0P7 198 aa16.65■□□□□ 0.26
VSX1-205ENST00000429762 ZNF492Q9P255 531 aa16.65■□□□□ 0.26
VSX1-205ENST00000429762 F6UB75 175 aa16.64■□□□□ 0.25
VSX1-205ENST00000429762 SPINK4O60575 86 aa16.64■□□□□ 0.25
VSX1-205ENST00000429762 DCANP1Q8TF63 244 aa16.64■□□□□ 0.25
VSX1-205ENST00000429762 IMMP2LQ96T52 175 aa16.64■□□□□ 0.25
VSX1-205ENST00000429762 CCL24O00175 119 aa16.64■□□□□ 0.25
VSX1-205ENST00000429762 FOXL1Q12952 345 aa16.64■□□□□ 0.25
VSX1-205ENST00000429762 NSUN5P1Q3KNT7 163 aa16.64■□□□□ 0.25
VSX1-205ENST00000429762 P01737 135 aa16.63■□□□□ 0.25
VSX1-205ENST00000429762 DAZAP1Q96EP5 407 aaKnown RBP16.63■□□□□ 0.25
VSX1-205ENST00000429762 RPL19P84098 196 aaKnown RBP16.62■□□□□ 0.25
VSX1-205ENST00000429762 RPP21Q9H633 154 aaKnown RBP16.62■□□□□ 0.25
VSX1-205ENST00000429762 RBAKDNA6NC62 111 aa16.62■□□□□ 0.25
VSX1-205ENST00000429762 M0QZ24 198 aa16.62■□□□□ 0.25
VSX1-205ENST00000429762 CSN3P07498 182 aa16.62■□□□□ 0.25
VSX1-205ENST00000429762 FRMD6-AS1P0C7T7 363 aa16.62■□□□□ 0.25
VSX1-205ENST00000429762 ZNF80P51504 273 aaPredicted RBP16.62■□□□□ 0.25
VSX1-205ENST00000429762 WFDC12Q8WWY7 111 aa16.62■□□□□ 0.25
VSX1-205ENST00000429762 BIN3Q9NQY0 253 aa16.62■□□□□ 0.25
VSX1-205ENST00000429762 PEMTQ9UBM1 199 aa16.62■□□□□ 0.25
VSX1-205ENST00000429762 C1orf196B1AJZ1 125 aa16.61■□□□□ 0.25
VSX1-205ENST00000429762 GZMBP10144 247 aa16.61■□□□□ 0.25
VSX1-205ENST00000429762 FHL3Q13643 280 aa16.61■□□□□ 0.25
VSX1-205ENST00000429762 SMIM27A0A1W2PRY6 76 aa16.6■□□□□ 0.25
VSX1-205ENST00000429762 ADARB2-AS1A8MUL3 147 aa16.6■□□□□ 0.25
VSX1-205ENST00000429762 TRGC2P03986 189 aa16.6■□□□□ 0.25
VSX1-205ENST00000429762 ZNF688P0C7X2 276 aa16.6■□□□□ 0.25
VSX1-205ENST00000429762 SAPCD1Q5SSQ6 148 aa16.6■□□□□ 0.25
VSX1-205ENST00000429762 TMEM78Q5T7P6 136 aa16.6■□□□□ 0.25
VSX1-205ENST00000429762 CLEC5AQ9NY25 188 aa16.6■□□□□ 0.25
VSX1-205ENST00000429762 C2CD3Q4AC94 2353 aa16.59■□□□□ 0.25
VSX1-205ENST00000429762 SH2D1AO60880 128 aa16.59■□□□□ 0.25
VSX1-205ENST00000429762 CT45A10P0DMU9 189 aa16.59■□□□□ 0.25
VSX1-205ENST00000429762 HIST1H1AQ02539 215 aaPredicted RBP16.59■□□□□ 0.25
VSX1-205ENST00000429762 OR2D3Q8NGH3 330 aa16.59■□□□□ 0.25
VSX1-205ENST00000429762 WNK1Q9H4A3 2382 aa16.59■□□□□ 0.25
VSX1-205ENST00000429762 ZNF138P52744 262 aa16.58■□□□□ 0.25
VSX1-205ENST00000429762 C9orf47Q6ZRZ4 202 aa16.58■□□□□ 0.25
VSX1-205ENST00000429762 NDFIP1Q9BT67 221 aa16.58■□□□□ 0.25
VSX1-205ENST00000429762 SRD5A3Q9H8P0 318 aa16.58■□□□□ 0.25
VSX1-205ENST00000429762 FBLL1A6NHQ2 334 aaKnown RBP16.58■□□□□ 0.24
VSX1-205ENST00000429762 K7EQG2 157 aa16.58■□□□□ 0.24
VSX1-205ENST00000429762 ID1P41134 155 aa16.58■□□□□ 0.24
VSX1-205ENST00000429762 PSMG4Q5JS54 123 aa16.58■□□□□ 0.24
VSX1-205ENST00000429762 NEU1Q99519 415 aa16.58■□□□□ 0.24
VSX1-205ENST00000429762 TMSB15BA0A087X1C1 80 aa16.57■□□□□ 0.24
VSX1-205ENST00000429762 J3KRW8 73 aa16.57■□□□□ 0.24
VSX1-205ENST00000429762 OVOL1O14753 267 aa16.57■□□□□ 0.24
VSX1-205ENST00000429762 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.57■□□□□ 0.24
VSX1-205ENST00000429762 OR10J6PQ8NGY7 276 aa16.57■□□□□ 0.24
VSX1-205ENST00000429762 DYNLRB2Q8TF09 96 aa16.57■□□□□ 0.24
VSX1-205ENST00000429762 TSKUQ8WUA8 353 aa16.57■□□□□ 0.24
VSX1-205ENST00000429762 NPIPB6E9PJ23 425 aa16.57■□□□□ 0.24
VSX1-205ENST00000429762 RAB5BP61020 215 aa16.57■□□□□ 0.24
VSX1-205ENST00000429762 SMUG1Q53HV7 270 aa16.57■□□□□ 0.24
VSX1-205ENST00000429762 MRPL54Q6P161 138 aaKnown RBP16.57■□□□□ 0.24
VSX1-205ENST00000429762 OR8A1Q8NGG7 326 aa16.57■□□□□ 0.24
VSX1-205ENST00000429762 TYMSP04818 313 aa16.56■□□□□ 0.24
VSX1-205ENST00000429762 CD33P20138 364 aa16.56■□□□□ 0.24
VSX1-205ENST00000429762 FAM162BQ5T6X4 162 aa16.56■□□□□ 0.24
VSX1-205ENST00000429762 GDF5OSQ5U4N7 250 aa16.56■□□□□ 0.24
VSX1-205ENST00000429762 TMEM61Q8N0U2 210 aa16.56■□□□□ 0.24
VSX1-205ENST00000429762 NUP35Q8NFH5 326 aa16.56■□□□□ 0.24
VSX1-205ENST00000429762 GTSF1Q8WW33 167 aa16.56■□□□□ 0.24
VSX1-205ENST00000429762 BTF3L4Q96K17 158 aa16.56■□□□□ 0.24
VSX1-205ENST00000429762 Q6ZQT7 251 aa16.55■□□□□ 0.24
VSX1-205ENST00000429762 HIGD1CA8MV81 97 aa16.55■□□□□ 0.24
VSX1-205ENST00000429762 PRR9Q5T870 116 aa16.55■□□□□ 0.24
VSX1-205ENST00000429762 COX8CQ7Z4L0 72 aa16.55■□□□□ 0.24
VSX1-205ENST00000429762 IZUMO1RA6ND01 250 aa16.54■□□□□ 0.24
VSX1-205ENST00000429762 A8MWL6 223 aa16.53■□□□□ 0.24
VSX1-205ENST00000429762 OR4B1Q8NGF8 309 aa16.53■□□□□ 0.24
VSX1-205ENST00000429762 FRZBQ92765 325 aa16.53■□□□□ 0.24
VSX1-205ENST00000429762 PGLYRP4Q96LB8 373 aa16.53■□□□□ 0.24
VSX1-205ENST00000429762 NAT8BQ9UHF3 227 aa16.53■□□□□ 0.24
VSX1-205ENST00000429762 TRAV9-1A0A075B6T8 112 aa16.53■□□□□ 0.24
VSX1-205ENST00000429762 DEFB114Q30KQ6 69 aa16.53■□□□□ 0.24
VSX1-205ENST00000429762 CD300EQ496F6 205 aaPredicted RBP16.53■□□□□ 0.24
VSX1-205ENST00000429762 CT83Q5H943 113 aa16.53■□□□□ 0.24
VSX1-205ENST00000429762 PRR31Q5SQ13 230 aa16.53■□□□□ 0.24
VSX1-205ENST00000429762 RBPMS2Q6ZRY4 209 aaKnown RBP16.53■□□□□ 0.24
VSX1-205ENST00000429762 LOC105371267A0A1B0GV96 52 aa16.52■□□□□ 0.24
VSX1-205ENST00000429762 PHOX2AO14813 284 aa16.52■□□□□ 0.24
VSX1-205ENST00000429762 SNRPD3P62318 126 aaKnown RBP16.52■□□□□ 0.24
VSX1-205ENST00000429762 FABP9Q0Z7S8 132 aa16.52■□□□□ 0.24
VSX1-205ENST00000429762 SAMD13Q5VXD3 122 aa16.51■□□□□ 0.23
VSX1-205ENST00000429762 LINC00477Q96M19 166 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms