RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 IGLC7A0M8Q6 106 aa3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 C9JAW5 83 aa3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 K7EP34 96 aa3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 SIRPB1O00241 398 aa3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 MPDU1O75352 247 aa3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 SLC2A10O95528 541 aa3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 HLA-DPB1P04440 258 aa3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 RPL7P18124 248 aaKnown RBP3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 PPIBP23284 216 aaKnown RBP3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 RBM11P57052 281 aaKnown RBP3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 ZNF121P58317 390 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 GNG5P63218 68 aa3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 RPL18Q07020 188 aaKnown RBP3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 ELOBQ15370 118 aa3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 TEX36Q5VZQ5 186 aa3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 SPATA31B1PQ5VZV4 182 aa3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 RASL11AQ6T310 242 aa3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 FAM19A5Q7Z5A7 132 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 ZNF429Q86V71 674 aa3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 OR1L8Q8NGR8 309 aa3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 OR2K2Q8NGT1 345 aa3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 OR5AK2Q8NH90 309 aa3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 OR1F12Q8NHA8 337 aa3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 ZNRF2Q8NHG8 242 aa3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 RPS4Y2Q8TD47 263 aa3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 WDR61Q9GZS3 305 aaKnown RBP3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 IFI27L2Q9H2X8 130 aa3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 SMDT1Q9H4I9 107 aa3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 IKZF5Q9H5V7 419 aa3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 ZNF702PQ9H963 129 aa3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 DCAF13Q9NV06 445 aaKnown RBP3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 GNG12Q9UBI6 72 aa3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 HIGD1AQ9Y241 93 aa3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 STARD9Q9P2P6 4700 aa3.18□□□□□ -1.9
HMGB3P5-201ENST00000428894 FRAS1Q86XX4 4008 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 IGHV3OR16-12A0A075B7B8 117 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 FNDC10F2Z333 226 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 TAX1BP3O14907 124 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 SYNGR1O43759 233 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 DHRS3O75911 302 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 PGA5P0DJD9 388 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 SLC25A4P12235 298 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 SRIP30626 198 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 FAUP35544 74 aaKnown RBP3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 MYCNOSP40205 109 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 MFAP2P55001 183 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 LCN6P62502 163 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 PSG9Q00887 426 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 RAB40BQ12829 278 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 RPEL1Q2QD12 228 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 TTC32Q5I0X7 151 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 UBE2NLQ5JXB2 153 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 AADACL3Q5VUY0 350 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 FOXI2Q6ZQN5 318 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 PPP1R27Q86WC6 154 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 C10orf111Q8N326 155 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 DEFB125Q8N687 156 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 OR8B12Q8NGG6 310 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 PLPPR1Q8TBJ4 325 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 OR51E1Q8TCB6 317 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 H1FXQ92522 213 aaKnown RBP3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 ZNF799Q96GE5 643 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 ZNF488Q96MN9 340 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 YPEL4Q96NS1 127 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 DERL3Q96Q80 235 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 IMMP2LQ96T52 175 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 MCHR1Q99705 422 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 ATP5SQ99766 215 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 RASL11BQ9BPW5 248 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 GGTLC1Q9BX51 225 aa3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 RPL36Q9Y3U8 105 aaKnown RBP3.17□□□□□ -1.9
HMGB3P5-201ENST00000428894 IGKV1D-43A0A0B4J1Z2 117 aa3.16□□□□□ -1.9
HMGB3P5-201ENST00000428894 DUXBA0A1W2PPF3 345 aa3.16□□□□□ -1.9
HMGB3P5-201ENST00000428894 A6NDX4 124 aa3.16□□□□□ -1.9
HMGB3P5-201ENST00000428894 OR2T8A6NH00 312 aa3.16□□□□□ -1.9
HMGB3P5-201ENST00000428894 ZFP92A6NM28 416 aa3.16□□□□□ -1.9
HMGB3P5-201ENST00000428894 RER1O15258 196 aa3.16□□□□□ -1.9
HMGB3P5-201ENST00000428894 CHST1O43916 411 aa3.16□□□□□ -1.9
HMGB3P5-201ENST00000428894 DUSP14O95147 198 aaKnown RBP3.16□□□□□ -1.9
HMGB3P5-201ENST00000428894 SFT2D2O95562 160 aa3.16□□□□□ -1.9
HMGB3P5-201ENST00000428894 CA1P00915 261 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P5-201ENST00000428894 CRYGDP07320 174 aa3.16□□□□□ -1.9
HMGB3P5-201ENST00000428894 SEC11BP0C7V7 166 aa3.16□□□□□ -1.9
HMGB3P5-201ENST00000428894 IGLC2P0DOY2 106 aa3.16□□□□□ -1.9
HMGB3P5-201ENST00000428894 IGLC3P0DOY3 106 aa3.16□□□□□ -1.9
HMGB3P5-201ENST00000428894 TSPOP30536 169 aa3.16□□□□□ -1.9
HMGB3P5-201ENST00000428894 ZNF93P35789 620 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P5-201ENST00000428894 RPL13AP40429 203 aaKnown RBP3.16□□□□□ -1.9
HMGB3P5-201ENST00000428894 CAV3P56539 151 aa3.16□□□□□ -1.9
HMGB3P5-201ENST00000428894 HSPE1P61604 102 aaKnown RBP3.16□□□□□ -1.9
HMGB3P5-201ENST00000428894 RPS28P62857 69 aaKnown RBP3.16□□□□□ -1.9
HMGB3P5-201ENST00000428894 RPL31P62899 125 aaKnown RBP3.16□□□□□ -1.9
HMGB3P5-201ENST00000428894 BLCAPP62952 87 aa3.16□□□□□ -1.9
HMGB3P5-201ENST00000428894 ZNF92Q03936 586 aa3.16□□□□□ -1.9
HMGB3P5-201ENST00000428894 MEF2CQ06413 473 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P5-201ENST00000428894 FMODQ06828 376 aa3.16□□□□□ -1.9
HMGB3P5-201ENST00000428894 CATR1Q13166 79 aa3.16□□□□□ -1.9
HMGB3P5-201ENST00000428894 KLRD1Q13241 179 aa3.16□□□□□ -1.9
HMGB3P5-201ENST00000428894 TDRG1Q3Y452 100 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms