RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 MRPL23Q16540 153 aaKnown RBP12.42□□□□□ -0.42
UPK3BP1-201ENST00000428678 Q6ZRG5 221 aa12.42□□□□□ -0.42
UPK3BP1-201ENST00000428678 HHLA3Q9XRX5 114 aa12.42□□□□□ -0.42
UPK3BP1-201ENST00000428678 RGS13O14921 159 aa12.41□□□□□ -0.42
UPK3BP1-201ENST00000428678 PRAF2O60831 178 aa12.41□□□□□ -0.42
UPK3BP1-201ENST00000428678 ZNF253O75346 499 aa12.41□□□□□ -0.42
UPK3BP1-201ENST00000428678 MPDU1O75352 247 aa12.41□□□□□ -0.42
UPK3BP1-201ENST00000428678 CRYBA4P53673 196 aa12.41□□□□□ -0.42
UPK3BP1-201ENST00000428678 RAB31Q13636 194 aa12.41□□□□□ -0.42
UPK3BP1-201ENST00000428678 MIC13Q5XKP0 118 aa12.41□□□□□ -0.42
UPK3BP1-201ENST00000428678 NEGR1Q7Z3B1 354 aa12.41□□□□□ -0.42
UPK3BP1-201ENST00000428678 OR1L4Q8NGR5 311 aa12.41□□□□□ -0.42
UPK3BP1-201ENST00000428678 MRPL53Q96EL3 112 aaKnown RBP12.41□□□□□ -0.42
UPK3BP1-201ENST00000428678 FLVCR2Q9UPI3 526 aa12.41□□□□□ -0.42
UPK3BP1-201ENST00000428678 C7orf66A4D0T2 115 aa12.4□□□□□ -0.42
UPK3BP1-201ENST00000428678 NDUFB6O95139 128 aa12.4□□□□□ -0.42
UPK3BP1-201ENST00000428678 GPX1P07203 203 aa12.4□□□□□ -0.42
UPK3BP1-201ENST00000428678 IBA57Q5T440 356 aaKnown RBP12.4□□□□□ -0.42
UPK3BP1-201ENST00000428678 Q6ZSN1 163 aa12.4□□□□□ -0.42
UPK3BP1-201ENST00000428678 NRARPQ7Z6K4 114 aa12.4□□□□□ -0.42
UPK3BP1-201ENST00000428678 LINC00477Q96M19 166 aa12.4□□□□□ -0.42
UPK3BP1-201ENST00000428678 VGLL1Q99990 258 aa12.4□□□□□ -0.42
UPK3BP1-201ENST00000428678 TP53TG3Q9ULZ0 132 aa12.4□□□□□ -0.42
UPK3BP1-201ENST00000428678 TRBV19A0A075B6N1 114 aa12.39□□□□□ -0.43
UPK3BP1-201ENST00000428678 E5RGE8 158 aa12.39□□□□□ -0.43
UPK3BP1-201ENST00000428678 EVI2AP22794 236 aa12.39□□□□□ -0.43
UPK3BP1-201ENST00000428678 FHL2Q14192 279 aa12.39□□□□□ -0.43
UPK3BP1-201ENST00000428678 WFDC10BQ8IUB3 73 aa12.39□□□□□ -0.43
UPK3BP1-201ENST00000428678 FAM19A4Q96LR4 140 aa12.39□□□□□ -0.43
UPK3BP1-201ENST00000428678 PFDN5Q99471 154 aa12.39□□□□□ -0.43
UPK3BP1-201ENST00000428678 ARPC5LQ9BPX5 153 aa12.39□□□□□ -0.43
UPK3BP1-201ENST00000428678 AGPAT4-IT1Q9H0P7 198 aa12.39□□□□□ -0.43
UPK3BP1-201ENST00000428678 J3QL48 77 aa12.38□□□□□ -0.43
UPK3BP1-201ENST00000428678 L7N2F9 121 aa12.38□□□□□ -0.43
UPK3BP1-201ENST00000428678 MBPP02686 304 aaPredicted RBP12.38□□□□□ -0.43
UPK3BP1-201ENST00000428678 VAMP2P63027 116 aa12.38□□□□□ -0.43
UPK3BP1-201ENST00000428678 PRELID1Q9Y255 219 aa12.38□□□□□ -0.43
UPK3BP1-201ENST00000428678 TIMM9Q9Y5J7 89 aa12.38□□□□□ -0.43
UPK3BP1-201ENST00000428678 IGHV1OR15-1A0A075B7D0 117 aa12.37□□□□□ -0.43
UPK3BP1-201ENST00000428678 TRGV4A0A0C4DH28 118 aa12.37□□□□□ -0.43
UPK3BP1-201ENST00000428678 K7EP13 123 aa12.37□□□□□ -0.43
UPK3BP1-201ENST00000428678 CRISP2P16562 243 aa12.37□□□□□ -0.43
UPK3BP1-201ENST00000428678 SRIP30626 198 aa12.37□□□□□ -0.43
UPK3BP1-201ENST00000428678 S100A5P33763 92 aa12.37□□□□□ -0.43
UPK3BP1-201ENST00000428678 INPP1P49441 399 aa12.37□□□□□ -0.43
UPK3BP1-201ENST00000428678 BCAP31P51572 246 aa12.37□□□□□ -0.43
UPK3BP1-201ENST00000428678 Q6ZQT7 251 aa12.37□□□□□ -0.43
UPK3BP1-201ENST00000428678 C12orf45Q8N5I9 185 aaPredicted RBP12.37□□□□□ -0.43
UPK3BP1-201ENST00000428678 IGKV2-40A0A087WW87 121 aaPredicted RBP12.36□□□□□ -0.43
UPK3BP1-201ENST00000428678 IGLV5-52A0A0A0MRZ9 124 aa12.36□□□□□ -0.43
UPK3BP1-201ENST00000428678 CST7O76096 145 aa12.36□□□□□ -0.43
UPK3BP1-201ENST00000428678 NDUFB4O95168 129 aa12.36□□□□□ -0.43
UPK3BP1-201ENST00000428678 IGKV2D-40P01614 121 aaPredicted RBP12.36□□□□□ -0.43
UPK3BP1-201ENST00000428678 TMEM78Q5T7P6 136 aa12.36□□□□□ -0.43
UPK3BP1-201ENST00000428678 PRR9Q5T870 116 aa12.36□□□□□ -0.43
UPK3BP1-201ENST00000428678 EXOC3-AS1Q8N2X6 119 aa12.36□□□□□ -0.43
UPK3BP1-201ENST00000428678 BLNKQ8WV28 456 aa12.36□□□□□ -0.43
UPK3BP1-201ENST00000428678 PCNPQ8WW12 178 aaKnown RBP12.36□□□□□ -0.43
UPK3BP1-201ENST00000428678 MRPL32Q9BYC8 188 aaKnown RBP12.36□□□□□ -0.43
UPK3BP1-201ENST00000428678 SLC39A9Q9NUM3 307 aa12.36□□□□□ -0.43
UPK3BP1-201ENST00000428678 UQCC1Q9NVA1 299 aa12.36□□□□□ -0.43
UPK3BP1-201ENST00000428678 NAP1L6A6NFF2 107 aa12.35□□□□□ -0.43
UPK3BP1-201ENST00000428678 K7EQD1 137 aa12.35□□□□□ -0.43
UPK3BP1-201ENST00000428678 CRYGDP07320 174 aa12.35□□□□□ -0.43
UPK3BP1-201ENST00000428678 PYYP10082 97 aa12.35□□□□□ -0.43
UPK3BP1-201ENST00000428678 HIST1H1EP10412 219 aaKnown RBP12.35□□□□□ -0.43
UPK3BP1-201ENST00000428678 CAV2P51636 162 aa12.35□□□□□ -0.43
UPK3BP1-201ENST00000428678 ZNF415Q09FC8 603 aa12.35□□□□□ -0.43
UPK3BP1-201ENST00000428678 C9orf47Q6ZRZ4 202 aa12.35□□□□□ -0.43
UPK3BP1-201ENST00000428678 ZFAND2AQ8N6M9 145 aa12.35□□□□□ -0.43
UPK3BP1-201ENST00000428678 TMEM14CQ9P0S9 112 aa12.35□□□□□ -0.43
UPK3BP1-201ENST00000428678 WDR83OSQ9Y284 106 aa12.35□□□□□ -0.43
UPK3BP1-201ENST00000428678 LSM5Q9Y4Y9 91 aaKnown RBP12.35□□□□□ -0.43
UPK3BP1-201ENST00000428678 PSCAO43653 123 aa12.34□□□□□ -0.43
UPK3BP1-201ENST00000428678 NMBP08949 121 aa12.34□□□□□ -0.43
UPK3BP1-201ENST00000428678 SFTA3P0C7M3 94 aa12.34□□□□□ -0.43
UPK3BP1-201ENST00000428678 GYPEP15421 78 aa12.34□□□□□ -0.43
UPK3BP1-201ENST00000428678 RPL29P47914 159 aaKnown RBP12.34□□□□□ -0.43
UPK3BP1-201ENST00000428678 PDE6HQ13956 83 aa12.34□□□□□ -0.43
UPK3BP1-201ENST00000428678 TMEM70Q9BUB7 260 aa12.34□□□□□ -0.43
UPK3BP1-201ENST00000428678 SRRQ9GZT4 340 aa12.34□□□□□ -0.43
UPK3BP1-201ENST00000428678 AAMDCQ9H7C9 122 aa12.34□□□□□ -0.43
UPK3BP1-201ENST00000428678 UBE2L5PA0A1B0GUS4 154 aa12.33□□□□□ -0.44
UPK3BP1-201ENST00000428678 CCSO14618 274 aa12.33□□□□□ -0.44
UPK3BP1-201ENST00000428678 BAXQ07812 192 aa12.33□□□□□ -0.44
UPK3BP1-201ENST00000428678 ZNF846Q147U1 533 aa12.33□□□□□ -0.44
UPK3BP1-201ENST00000428678 TRIQKQ629K1 86 aa12.33□□□□□ -0.44
UPK3BP1-201ENST00000428678 FAM122CQ6P4D5 195 aa12.33□□□□□ -0.44
UPK3BP1-201ENST00000428678 C10orf126Q8N4M7 172 aa12.33□□□□□ -0.44
UPK3BP1-201ENST00000428678 MITD1Q8WV92 249 aa12.33□□□□□ -0.44
UPK3BP1-201ENST00000428678 C20orf85Q9H1P6 137 aa12.33□□□□□ -0.44
UPK3BP1-201ENST00000428678 SPANXN2Q5MJ10 180 aa12.32□□□□□ -0.44
UPK3BP1-201ENST00000428678 NTN5Q8WTR8 489 aaPredicted RBP12.32□□□□□ -0.44
UPK3BP1-201ENST00000428678 ZNF479Q96JC4 524 aa12.32□□□□□ -0.44
UPK3BP1-201ENST00000428678 FAM24AA6NFZ4 105 aa12.31□□□□□ -0.44
UPK3BP1-201ENST00000428678 FAM25EA8MYX2 175 aa12.31□□□□□ -0.44
UPK3BP1-201ENST00000428678 ORM1P02763 201 aa12.31□□□□□ -0.44
UPK3BP1-201ENST00000428678 MUC21Q5SSG8 566 aa12.31□□□□□ -0.44
UPK3BP1-201ENST00000428678 TXNDC17Q9BRA2 123 aa12.31□□□□□ -0.44
UPK3BP1-201ENST00000428678 GPN1Q9HCN4 374 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms