RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 OR5C1Q8NGR4 320 aa11.23□□□□□ -0.61
COL18A1-205ENST00000423214 THAP6Q8TBB0 222 aa11.23□□□□□ -0.61
COL18A1-205ENST00000423214 ODF3Q96PU9 254 aa11.23□□□□□ -0.61
COL18A1-205ENST00000423214 PYGO2Q9BRQ0 406 aa11.23□□□□□ -0.61
COL18A1-205ENST00000423214 KRTAP4-5Q9BYR2 181 aa11.23□□□□□ -0.61
COL18A1-205ENST00000423214 NPIPB6E9PJ23 425 aa11.22□□□□□ -0.61
COL18A1-205ENST00000423214 CYCSP99999 105 aaKnown RBP11.22□□□□□ -0.61
COL18A1-205ENST00000423214 SPATA12Q7Z6I5 190 aa11.22□□□□□ -0.61
COL18A1-205ENST00000423214 PPP1R1CQ8WVI7 109 aa11.22□□□□□ -0.61
COL18A1-205ENST00000423214 SLC25A31Q9H0C2 315 aa11.22□□□□□ -0.61
COL18A1-205ENST00000423214 Q9H3A6 140 aa11.22□□□□□ -0.61
COL18A1-205ENST00000423214 LRP1BQ9NZR2 4599 aa11.22□□□□□ -0.61
COL18A1-205ENST00000423214 HOXA5P20719 270 aa11.21□□□□□ -0.61
COL18A1-205ENST00000423214 GCSAMLQ5JQS6 135 aa11.21□□□□□ -0.61
COL18A1-205ENST00000423214 SAT2Q96F10 170 aaPredicted RBP11.21□□□□□ -0.61
COL18A1-205ENST00000423214 UPK3BQ9BT76 320 aa11.21□□□□□ -0.61
COL18A1-205ENST00000423214 NPCDR1Q9BY65 106 aa11.21□□□□□ -0.61
COL18A1-205ENST00000423214 TMPRSS5Q9H3S3 457 aa11.21□□□□□ -0.61
COL18A1-205ENST00000423214 H3BNG1 76 aa11.2□□□□□ -0.62
COL18A1-205ENST00000423214 CT45A10P0DMU9 189 aa11.2□□□□□ -0.62
COL18A1-205ENST00000423214 ZNF680Q8NEM1 530 aa11.2□□□□□ -0.62
COL18A1-205ENST00000423214 CHAC2Q8WUX2 184 aa11.2□□□□□ -0.62
COL18A1-205ENST00000423214 KRTAP1-5Q9BYS1 174 aa11.2□□□□□ -0.62
COL18A1-205ENST00000423214 ZNF586Q9NXT0 402 aa11.2□□□□□ -0.62
COL18A1-205ENST00000423214 MRPS16Q9Y3D3 137 aaKnown RBP11.2□□□□□ -0.62
COL18A1-205ENST00000423214 TRGV2A0A075B6R0 118 aa11.19□□□□□ -0.62
COL18A1-205ENST00000423214 A0A1W2PPQ1 181 aa11.19□□□□□ -0.62
COL18A1-205ENST00000423214 C7orf71A4D174 169 aa11.19□□□□□ -0.62
COL18A1-205ENST00000423214 ZNF253O75346 499 aa11.19□□□□□ -0.62
COL18A1-205ENST00000423214 SLC25A5P05141 298 aaKnown RBP11.19□□□□□ -0.62
COL18A1-205ENST00000423214 DAZ2Q13117 558 aaKnown RBP11.19□□□□□ -0.62
COL18A1-205ENST00000423214 Q6ZTI0 123 aa11.19□□□□□ -0.62
COL18A1-205ENST00000423214 MRPL53Q96EL3 112 aaKnown RBP11.19□□□□□ -0.62
COL18A1-205ENST00000423214 MPDU1O75352 247 aa11.18□□□□□ -0.62
COL18A1-205ENST00000423214 MPC2O95563 127 aa11.18□□□□□ -0.62
COL18A1-205ENST00000423214 PYYP10082 97 aa11.18□□□□□ -0.62
COL18A1-205ENST00000423214 ESRGQ1W209 222 aa11.18□□□□□ -0.62
COL18A1-205ENST00000423214 TRGV1A0A0A0MS02 117 aa11.17□□□□□ -0.62
COL18A1-205ENST00000423214 M0R3E3 92 aa11.17□□□□□ -0.62
COL18A1-205ENST00000423214 ERCC8Q13216 396 aa11.17□□□□□ -0.62
COL18A1-205ENST00000423214 BLNKQ8WV28 456 aa11.17□□□□□ -0.62
COL18A1-205ENST00000423214 SMIM3Q9BZL3 60 aa11.17□□□□□ -0.62
COL18A1-205ENST00000423214 WDR61Q9GZS3 305 aaKnown RBP11.17□□□□□ -0.62
COL18A1-205ENST00000423214 AAMDCQ9H7C9 122 aa11.17□□□□□ -0.62
COL18A1-205ENST00000423214 GSN-AS1Q9NRJ2 163 aa11.17□□□□□ -0.62
COL18A1-205ENST00000423214 PRELID1Q9Y255 219 aa11.17□□□□□ -0.62
COL18A1-205ENST00000423214 TIMM9Q9Y5J7 89 aa11.17□□□□□ -0.62
COL18A1-205ENST00000423214 ALG5Q9Y673 324 aa11.17□□□□□ -0.62
COL18A1-205ENST00000423214 TRBV19A0A075B6N1 114 aa11.16□□□□□ -0.62
COL18A1-205ENST00000423214 BTN1A1Q13410 526 aa11.16□□□□□ -0.62
COL18A1-205ENST00000423214 MIR17HGQ75NE6 70 aa11.16□□□□□ -0.62
COL18A1-205ENST00000423214 EIF4E3Q8N5X7 224 aaKnown RBP11.16□□□□□ -0.62
COL18A1-205ENST00000423214 FUT9Q9Y231 359 aa11.16□□□□□ -0.62
COL18A1-205ENST00000423214 APOBP04114 4563 aaKnown RBP11.15□□□□□ -0.62
COL18A1-205ENST00000423214 HIST1H1EP10412 219 aaKnown RBP11.15□□□□□ -0.62
COL18A1-205ENST00000423214 BTF3P20290 206 aaKnown RBP11.15□□□□□ -0.62
COL18A1-205ENST00000423214 RPL12P30050 165 aaKnown RBP11.15□□□□□ -0.62
COL18A1-205ENST00000423214 PDE6HQ13956 83 aa11.15□□□□□ -0.62
COL18A1-205ENST00000423214 SLC25A2Q9BXI2 301 aa11.15□□□□□ -0.62
COL18A1-205ENST00000423214 TMEM14CQ9P0S9 112 aa11.15□□□□□ -0.62
COL18A1-205ENST00000423214 MBD2Q9UBB5 411 aa11.15□□□□□ -0.62
COL18A1-205ENST00000423214 HSPB11Q9Y547 144 aa11.15□□□□□ -0.62
COL18A1-205ENST00000423214 A0A096LPF7 62 aa11.14□□□□□ -0.63
COL18A1-205ENST00000423214 KLLNB2CW77 178 aa11.14□□□□□ -0.63
COL18A1-205ENST00000423214 NDUFB4O95168 129 aa11.14□□□□□ -0.63
COL18A1-205ENST00000423214 TMEM78Q5T7P6 136 aa11.14□□□□□ -0.63
COL18A1-205ENST00000423214 Q8N1X5 172 aa11.14□□□□□ -0.63
COL18A1-205ENST00000423214 EXOC3-AS1Q8N2X6 119 aa11.14□□□□□ -0.63
COL18A1-205ENST00000423214 C11orf72Q8NBR9 251 aa11.14□□□□□ -0.63
COL18A1-205ENST00000423214 FAM167A-AS1Q96KT0 104 aa11.14□□□□□ -0.63
COL18A1-205ENST00000423214 LINC00477Q96M19 166 aa11.14□□□□□ -0.63
COL18A1-205ENST00000423214 ATP5SQ99766 215 aa11.14□□□□□ -0.63
COL18A1-205ENST00000423214 ICOSQ9Y6W8 199 aa11.14□□□□□ -0.63
COL18A1-205ENST00000423214 RGS13O14921 159 aa11.13□□□□□ -0.63
COL18A1-205ENST00000423214 GPX1P07203 203 aa11.13□□□□□ -0.63
COL18A1-205ENST00000423214 PET100P0DJ07 73 aa11.13□□□□□ -0.63
COL18A1-205ENST00000423214 RNASE4P34096 147 aaKnown RBP11.13□□□□□ -0.63
COL18A1-205ENST00000423214 TCL1AP56279 114 aa11.13□□□□□ -0.63
COL18A1-205ENST00000423214 LINC00315P59091 139 aa11.13□□□□□ -0.63
COL18A1-205ENST00000423214 CD300CQ08708 224 aa11.13□□□□□ -0.63
COL18A1-205ENST00000423214 ANXA2RQ3ZCQ2 193 aa11.13□□□□□ -0.63
COL18A1-205ENST00000423214 VSIG2Q96IQ7 327 aa11.13□□□□□ -0.63
COL18A1-205ENST00000423214 C18orf15Q96N68 181 aa11.13□□□□□ -0.63
COL18A1-205ENST00000423214 ARPC5LQ9BPX5 153 aa11.13□□□□□ -0.63
COL18A1-205ENST00000423214 LINC00467Q9BRT7 94 aa11.13□□□□□ -0.63
COL18A1-205ENST00000423214 IGKV2-40A0A087WW87 121 aaPredicted RBP11.12□□□□□ -0.63
COL18A1-205ENST00000423214 C17orf112F2Z3M2 114 aa11.12□□□□□ -0.63
COL18A1-205ENST00000423214 SIVA1O15304 175 aa11.12□□□□□ -0.63
COL18A1-205ENST00000423214 IGKV2D-40P01614 121 aaPredicted RBP11.12□□□□□ -0.63
COL18A1-205ENST00000423214 OR10J4P0C629 311 aa11.12□□□□□ -0.63
COL18A1-205ENST00000423214 KRTAP10-2P60368 255 aa11.12□□□□□ -0.63
COL18A1-205ENST00000423214 ICAM4Q14773 271 aa11.12□□□□□ -0.63
COL18A1-205ENST00000423214 IBA57Q5T440 356 aaKnown RBP11.12□□□□□ -0.63
COL18A1-205ENST00000423214 FAM122CQ6P4D5 195 aa11.12□□□□□ -0.63
COL18A1-205ENST00000423214 SCGB1C1Q8TD33 95 aa11.12□□□□□ -0.63
COL18A1-205ENST00000423214 AGPAT4-IT1Q9H0P7 198 aa11.12□□□□□ -0.63
COL18A1-205ENST00000423214 OR51M1Q9H341 326 aa11.12□□□□□ -0.63
COL18A1-205ENST00000423214 WFDC1Q9HC57 220 aa11.12□□□□□ -0.63
COL18A1-205ENST00000423214 SCRT2Q9NQ03 307 aa11.12□□□□□ -0.63
COL18A1-205ENST00000423214 PAX4O43316 350 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 249.4 ms