RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 DNAH11Q96DT5 4516 aa14.93□□□□□ -0.02
PTPN4-202ENST00000420482 DYNC1H1Q14204 4646 aaKnown RBP14.93□□□□□ -0.02
PTPN4-202ENST00000420482 INMT-MINDY4F8WBC2 141 aa14.93□□□□□ -0.02
PTPN4-202ENST00000420482 MED14OSP0DP75 135 aa14.93□□□□□ -0.02
PTPN4-202ENST00000420482 DAZ2Q13117 558 aaKnown RBP14.93□□□□□ -0.02
PTPN4-202ENST00000420482 NACAE9PAV3 2078 aa14.93□□□□□ -0.02
PTPN4-202ENST00000420482 TRAV26-1A0A087WT03 109 aa14.92□□□□□ -0.02
PTPN4-202ENST00000420482 NBDYA0A0U1RRE5 68 aa14.92□□□□□ -0.02
PTPN4-202ENST00000420482 NDUFB4O95168 129 aa14.92□□□□□ -0.02
PTPN4-202ENST00000420482 GPX1P07203 203 aa14.92□□□□□ -0.02
PTPN4-202ENST00000420482 NMBP08949 121 aa14.92□□□□□ -0.02
PTPN4-202ENST00000420482 NBEAP1P0C6P0 100 aa14.92□□□□□ -0.02
PTPN4-202ENST00000420482 DEFA1P59665 94 aa14.92□□□□□ -0.02
PTPN4-202ENST00000420482 DEFA3P59666 94 aa14.92□□□□□ -0.02
PTPN4-202ENST00000420482 ERCC8Q13216 396 aa14.92□□□□□ -0.02
PTPN4-202ENST00000420482 ICAM4Q14773 271 aa14.92□□□□□ -0.02
PTPN4-202ENST00000420482 ZNRF2Q8NHG8 242 aa14.92□□□□□ -0.02
PTPN4-202ENST00000420482 RXFP4Q8TDU9 374 aa14.92□□□□□ -0.02
PTPN4-202ENST00000420482 SLC25A2Q9BXI2 301 aa14.92□□□□□ -0.02
PTPN4-202ENST00000420482 OR51M1Q9H341 326 aa14.92□□□□□ -0.02
PTPN4-202ENST00000420482 OR5AC2Q9NZP5 309 aa14.92□□□□□ -0.02
PTPN4-202ENST00000420482 PKD1P98161 4303 aa14.92□□□□□ -0.02
PTPN4-202ENST00000420482 KLLNB2CW77 178 aa14.91□□□□□ -0.02
PTPN4-202ENST00000420482 H3BNG1 76 aa14.91□□□□□ -0.02
PTPN4-202ENST00000420482 GCSAMLQ5JQS6 135 aa14.91□□□□□ -0.02
PTPN4-202ENST00000420482 C9orf47Q6ZRZ4 202 aa14.91□□□□□ -0.02
PTPN4-202ENST00000420482 EXOC3-AS1Q8N2X6 119 aa14.91□□□□□ -0.02
PTPN4-202ENST00000420482 EIF4E3Q8N5X7 224 aaKnown RBP14.91□□□□□ -0.02
PTPN4-202ENST00000420482 WDR61Q9GZS3 305 aaKnown RBP14.91□□□□□ -0.02
PTPN4-202ENST00000420482 PTTG2Q9NZH5 202 aa14.91□□□□□ -0.02
PTPN4-202ENST00000420482 TRGV2A0A075B6R0 118 aa14.9□□□□□ -0.02
PTPN4-202ENST00000420482 FAM122CQ6P4D5 195 aa14.9□□□□□ -0.02
PTPN4-202ENST00000420482 MIR17HGQ75NE6 70 aa14.9□□□□□ -0.02
PTPN4-202ENST00000420482 SSX7Q7RTT5 188 aa14.9□□□□□ -0.02
PTPN4-202ENST00000420482 LINC00467Q9BRT7 94 aa14.9□□□□□ -0.02
PTPN4-202ENST00000420482 PAXXQ9BUH6 204 aa14.9□□□□□ -0.02
PTPN4-202ENST00000420482 AGPAT4-IT1Q9H0P7 198 aa14.9□□□□□ -0.02
PTPN4-202ENST00000420482 LINC00588Q9Y4M8 146 aa14.9□□□□□ -0.02
PTPN4-202ENST00000420482 SSNA1O43805 119 aa14.89□□□□□ -0.03
PTPN4-202ENST00000420482 CRISP2P16562 243 aa14.89□□□□□ -0.03
PTPN4-202ENST00000420482 RNASE4P34096 147 aaKnown RBP14.89□□□□□ -0.03
PTPN4-202ENST00000420482 CSN1S1P47710 185 aa14.89□□□□□ -0.03
PTPN4-202ENST00000420482 ANXA2RQ3ZCQ2 193 aa14.89□□□□□ -0.03
PTPN4-202ENST00000420482 PPP1R1CQ8WVI7 109 aa14.89□□□□□ -0.03
PTPN4-202ENST00000420482 MARVELD1Q9BSK0 173 aa14.89□□□□□ -0.03
PTPN4-202ENST00000420482 FUT9Q9Y231 359 aa14.89□□□□□ -0.03
PTPN4-202ENST00000420482 OR7C2O60412 319 aa14.88□□□□□ -0.03
PTPN4-202ENST00000420482 BTN1A1Q13410 526 aa14.88□□□□□ -0.03
PTPN4-202ENST00000420482 C6orf223Q8N319 242 aa14.88□□□□□ -0.03
PTPN4-202ENST00000420482 SCGB1C1Q8TD33 95 aa14.88□□□□□ -0.03
PTPN4-202ENST00000420482 FAM167A-AS1Q96KT0 104 aa14.88□□□□□ -0.03
PTPN4-202ENST00000420482 FAM19A4Q96LR4 140 aa14.88□□□□□ -0.03
PTPN4-202ENST00000420482 ATP5SQ99766 215 aa14.88□□□□□ -0.03
PTPN4-202ENST00000420482 A0A0J9YY99 117 aa14.87□□□□□ -0.03
PTPN4-202ENST00000420482 RGS13O14921 159 aa14.87□□□□□ -0.03
PTPN4-202ENST00000420482 ZNF324O75467 553 aaPredicted RBP14.87□□□□□ -0.03
PTPN4-202ENST00000420482 IFNA5P01569 189 aa14.87□□□□□ -0.03
PTPN4-202ENST00000420482 OR10J4P0C629 311 aa14.87□□□□□ -0.03
PTPN4-202ENST00000420482 TTC32Q5I0X7 151 aa14.87□□□□□ -0.03
PTPN4-202ENST00000420482 Q6ZTI0 123 aa14.87□□□□□ -0.03
PTPN4-202ENST00000420482 LYPD1Q8N2G4 141 aa14.87□□□□□ -0.03
PTPN4-202ENST00000420482 C18orf15Q96N68 181 aa14.87□□□□□ -0.03
PTPN4-202ENST00000420482 GSN-AS1Q9NRJ2 163 aa14.87□□□□□ -0.03
PTPN4-202ENST00000420482 IGKV2-40A0A087WW87 121 aaPredicted RBP14.86□□□□□ -0.03
PTPN4-202ENST00000420482 TRBV7-9A0A0J9YWB2 115 aa14.86□□□□□ -0.03
PTPN4-202ENST00000420482 H0YIZ8 118 aa14.86□□□□□ -0.03
PTPN4-202ENST00000420482 IGKV2D-40P01614 121 aaPredicted RBP14.86□□□□□ -0.03
PTPN4-202ENST00000420482 H2BFSP57053 126 aa14.86□□□□□ -0.03
PTPN4-202ENST00000420482 TAS2R45P59539 299 aa14.86□□□□□ -0.03
PTPN4-202ENST00000420482 CD300CQ08708 224 aa14.86□□□□□ -0.03
PTPN4-202ENST00000420482 ARPC5LQ9BPX5 153 aa14.86□□□□□ -0.03
PTPN4-202ENST00000420482 TMPRSS5Q9H3S3 457 aa14.86□□□□□ -0.03
PTPN4-202ENST00000420482 Q9H8V8 135 aa14.86□□□□□ -0.03
PTPN4-202ENST00000420482 ZNF492Q9P255 531 aa14.86□□□□□ -0.03
PTPN4-202ENST00000420482 TRGV1A0A0A0MS02 117 aa14.85□□□□□ -0.03
PTPN4-202ENST00000420482 A6NHS1 94 aa14.85□□□□□ -0.03
PTPN4-202ENST00000420482 HOXA5P20719 270 aa14.85□□□□□ -0.03
PTPN4-202ENST00000420482 ZNF138P52744 262 aa14.85□□□□□ -0.03
PTPN4-202ENST00000420482 IFITM3Q01628 133 aa14.85□□□□□ -0.03
PTPN4-202ENST00000420482 KHDC3LQ587J8 217 aa14.85□□□□□ -0.03
PTPN4-202ENST00000420482 IBA57Q5T440 356 aaKnown RBP14.85□□□□□ -0.03
PTPN4-202ENST00000420482 FXYD5Q96DB9 178 aa14.85□□□□□ -0.03
PTPN4-202ENST00000420482 MPC2O95563 127 aa14.84□□□□□ -0.03
PTPN4-202ENST00000420482 TCL1AP56279 114 aa14.84□□□□□ -0.03
PTPN4-202ENST00000420482 UBE2L3P68036 154 aaKnown RBP14.84□□□□□ -0.03
PTPN4-202ENST00000420482 FFAR4Q5NUL3 377 aa14.84□□□□□ -0.03
PTPN4-202ENST00000420482 C11orf72Q8NBR9 251 aa14.84□□□□□ -0.03
PTPN4-202ENST00000420482 VGLL1Q99990 258 aa14.84□□□□□ -0.03
PTPN4-202ENST00000420482 HSPB11Q9Y547 144 aa14.84□□□□□ -0.03
PTPN4-202ENST00000420482 IGHV1OR15-1A0A075B7D0 117 aa14.83□□□□□ -0.04
PTPN4-202ENST00000420482 RBAKDNA6NC62 111 aa14.83□□□□□ -0.04
PTPN4-202ENST00000420482 RPL12P30050 165 aaKnown RBP14.83□□□□□ -0.04
PTPN4-202ENST00000420482 RANP62826 216 aaKnown RBP14.83□□□□□ -0.04
PTPN4-202ENST00000420482 UPK3BQ9BT76 320 aa14.83□□□□□ -0.04
PTPN4-202ENST00000420482 FAM74A1Q5RGS3 127 aa14.82□□□□□ -0.04
PTPN4-202ENST00000420482 ZFAND2AQ8N6M9 145 aa14.82□□□□□ -0.04
PTPN4-202ENST00000420482 PHYHIPLQ96FC7 376 aa14.82□□□□□ -0.04
PTPN4-202ENST00000420482 SPINK4O60575 86 aa14.81□□□□□ -0.04
PTPN4-202ENST00000420482 ZNF415Q09FC8 603 aa14.81□□□□□ -0.04
PTPN4-202ENST00000420482 Q9H3A6 140 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms