RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 IGKV2-40A0A087WW87 121 aaPredicted RBP11.6□□□□□ -0.55
LINC00404-201ENST00000418660 C7orf71A4D174 169 aa11.6□□□□□ -0.55
LINC00404-201ENST00000418660 KLLNB2CW77 178 aa11.6□□□□□ -0.55
LINC00404-201ENST00000418660 F5H768 121 aa11.6□□□□□ -0.55
LINC00404-201ENST00000418660 IGKV2D-40P01614 121 aaPredicted RBP11.6□□□□□ -0.55
LINC00404-201ENST00000418660 CRISP2P16562 243 aa11.6□□□□□ -0.55
LINC00404-201ENST00000418660 TAS2R45P59539 299 aa11.6□□□□□ -0.55
LINC00404-201ENST00000418660 RNF212Q495C1 297 aa11.6□□□□□ -0.55
LINC00404-201ENST00000418660 TMEM78Q5T7P6 136 aa11.6□□□□□ -0.55
LINC00404-201ENST00000418660 UBE2DNLQ8IWF7 75 aa11.6□□□□□ -0.55
LINC00404-201ENST00000418660 LYPD1Q8N2G4 141 aa11.6□□□□□ -0.55
LINC00404-201ENST00000418660 PHYHIPLQ96FC7 376 aa11.6□□□□□ -0.55
LINC00404-201ENST00000418660 SNURFLB1AK76 121 aa11.59□□□□□ -0.55
LINC00404-201ENST00000418660 NMBP08949 121 aa11.59□□□□□ -0.55
LINC00404-201ENST00000418660 RANP62826 216 aaKnown RBP11.59□□□□□ -0.55
LINC00404-201ENST00000418660 UBE2L3P68036 154 aaKnown RBP11.59□□□□□ -0.55
LINC00404-201ENST00000418660 KHDC3LQ587J8 217 aa11.59□□□□□ -0.55
LINC00404-201ENST00000418660 LINC00612Q8N6U2 182 aa11.59□□□□□ -0.55
LINC00404-201ENST00000418660 VGLL1Q99990 258 aa11.59□□□□□ -0.55
LINC00404-201ENST00000418660 ZNF324O75467 553 aaPredicted RBP11.58□□□□□ -0.56
LINC00404-201ENST00000418660 GPX1P07203 203 aa11.58□□□□□ -0.56
LINC00404-201ENST00000418660 CSN1S1P47710 185 aa11.58□□□□□ -0.56
LINC00404-201ENST00000418660 CD300CQ08708 224 aa11.58□□□□□ -0.56
LINC00404-201ENST00000418660 ACOT6Q3I5F7 207 aaPredicted RBP11.58□□□□□ -0.56
LINC00404-201ENST00000418660 LINC00467Q9BRT7 94 aa11.58□□□□□ -0.56
LINC00404-201ENST00000418660 ZNF492Q9P255 531 aa11.58□□□□□ -0.56
LINC00404-201ENST00000418660 BIRC6Q9NR09 4857 aa11.58□□□□□ -0.56
LINC00404-201ENST00000418660 M6PRP20645 277 aa11.57□□□□□ -0.56
LINC00404-201ENST00000418660 RNASE4P34096 147 aaKnown RBP11.57□□□□□ -0.56
LINC00404-201ENST00000418660 ZNF138P52744 262 aa11.57□□□□□ -0.56
LINC00404-201ENST00000418660 DAZ2Q13117 558 aaKnown RBP11.57□□□□□ -0.56
LINC00404-201ENST00000418660 BTN1A1Q13410 526 aa11.57□□□□□ -0.56
LINC00404-201ENST00000418660 ZFAND2AQ8N6M9 145 aa11.57□□□□□ -0.56
LINC00404-201ENST00000418660 Q9H3A6 140 aa11.57□□□□□ -0.56
LINC00404-201ENST00000418660 TRBV7-9A0A0J9YWB2 115 aa11.56□□□□□ -0.56
LINC00404-201ENST00000418660 A0A1W2PPV4 95 aa11.56□□□□□ -0.56
LINC00404-201ENST00000418660 RBAKDNA6NC62 111 aa11.56□□□□□ -0.56
LINC00404-201ENST00000418660 LGALS9BQ3B8N2 356 aa11.56□□□□□ -0.56
LINC00404-201ENST00000418660 EIF4E3Q8N5X7 224 aaKnown RBP11.56□□□□□ -0.56
LINC00404-201ENST00000418660 ZNF680Q8NEM1 530 aa11.56□□□□□ -0.56
LINC00404-201ENST00000418660 ASB13Q8WXK3 278 aa11.56□□□□□ -0.56
LINC00404-201ENST00000418660 AQP10Q96PS8 301 aa11.56□□□□□ -0.56
LINC00404-201ENST00000418660 GAGE12BA1L429 117 aa11.55□□□□□ -0.56
LINC00404-201ENST00000418660 M0R2N4 97 aa11.55□□□□□ -0.56
LINC00404-201ENST00000418660 GAGE7O76087 117 aa11.55□□□□□ -0.56
LINC00404-201ENST00000418660 GAGE12FP0CL80 117 aa11.55□□□□□ -0.56
LINC00404-201ENST00000418660 GAGE12GP0CL81 117 aa11.55□□□□□ -0.56
LINC00404-201ENST00000418660 GAGE12IP0CL82 117 aa11.55□□□□□ -0.56
LINC00404-201ENST00000418660 ZNF266Q14584 549 aa11.55□□□□□ -0.56
LINC00404-201ENST00000418660 ANXA2RQ3ZCQ2 193 aa11.55□□□□□ -0.56
LINC00404-201ENST00000418660 RXFP4Q8TDU9 374 aa11.55□□□□□ -0.56
LINC00404-201ENST00000418660 DNAH10Q8IVF4 4471 aa11.54□□□□□ -0.56
LINC00404-201ENST00000418660 EIF3GO75821 320 aaKnown RBP eCLIP11.54□□□□□ -0.56
LINC00404-201ENST00000418660 GIPP09681 153 aaPredicted RBP11.54□□□□□ -0.56
LINC00404-201ENST00000418660 FAM3BP58499 235 aaPredicted RBP11.54□□□□□ -0.56
LINC00404-201ENST00000418660 RAB2AP61019 212 aa11.54□□□□□ -0.56
LINC00404-201ENST00000418660 PRR9Q5T870 116 aa11.54□□□□□ -0.56
LINC00404-201ENST00000418660 PQLC2Q6ZP29 291 aa11.54□□□□□ -0.56
LINC00404-201ENST00000418660 C11orf72Q8NBR9 251 aa11.54□□□□□ -0.56
LINC00404-201ENST00000418660 OR10G4Q8NGN3 311 aa11.54□□□□□ -0.56
LINC00404-201ENST00000418660 OR10G9Q8NGN4 311 aa11.54□□□□□ -0.56
LINC00404-201ENST00000418660 OR10G7Q8NGN6 311 aa11.54□□□□□ -0.56
LINC00404-201ENST00000418660 GSN-AS1Q9NRJ2 163 aa11.54□□□□□ -0.56
LINC00404-201ENST00000418660 DNAH6Q9C0G6 4158 aa11.54□□□□□ -0.56
LINC00404-201ENST00000418660 DIRC3C9JPN6 131 aa11.53□□□□□ -0.56
LINC00404-201ENST00000418660 NUDT3O95989 172 aa11.53□□□□□ -0.56
LINC00404-201ENST00000418660 Q5BKY6 102 aa11.53□□□□□ -0.56
LINC00404-201ENST00000418660 LINC00336Q6ZUF6 198 aa11.53□□□□□ -0.56
LINC00404-201ENST00000418660 OR2G3Q8NGZ4 309 aa11.53□□□□□ -0.56
LINC00404-201ENST00000418660 Q8TAT8 98 aa11.53□□□□□ -0.56
LINC00404-201ENST00000418660 ATG101Q9BSB4 218 aa11.53□□□□□ -0.56
LINC00404-201ENST00000418660 OTORQ9NRC9 128 aa11.53□□□□□ -0.56
LINC00404-201ENST00000418660 IGLV2-18A0A075B6J9 118 aa11.52□□□□□ -0.57
LINC00404-201ENST00000418660 PGPA6NDG6 321 aa11.52□□□□□ -0.57
LINC00404-201ENST00000418660 RGS13O14921 159 aa11.52□□□□□ -0.57
LINC00404-201ENST00000418660 OR5I1Q13606 314 aa11.52□□□□□ -0.57
LINC00404-201ENST00000418660 FAM74A1Q5RGS3 127 aa11.52□□□□□ -0.57
LINC00404-201ENST00000418660 IBA57Q5T440 356 aaKnown RBP11.52□□□□□ -0.57
LINC00404-201ENST00000418660 Q6ZR54 194 aa11.52□□□□□ -0.57
LINC00404-201ENST00000418660 Q6ZTI0 123 aa11.52□□□□□ -0.57
LINC00404-201ENST00000418660 HSD17B11Q8NBQ5 300 aa11.52□□□□□ -0.57
LINC00404-201ENST00000418660 HYLS1Q96M11 299 aa11.52□□□□□ -0.57
LINC00404-201ENST00000418660 PSMG3Q9BT73 122 aaPredicted RBP11.52□□□□□ -0.57
LINC00404-201ENST00000418660 LENEPQ9Y5L5 61 aa11.52□□□□□ -0.57
LINC00404-201ENST00000418660 FRAS1Q86XX4 4008 aa11.52□□□□□ -0.57
LINC00404-201ENST00000418660 IGHV1OR15-1A0A075B7D0 117 aa11.51□□□□□ -0.57
LINC00404-201ENST00000418660 HOXA5P20719 270 aa11.51□□□□□ -0.57
LINC00404-201ENST00000418660 ATP6V0CP27449 155 aa11.51□□□□□ -0.57
LINC00404-201ENST00000418660 TCL1AP56279 114 aa11.51□□□□□ -0.57
LINC00404-201ENST00000418660 RGS21Q2M5E4 152 aa11.51□□□□□ -0.57
LINC00404-201ENST00000418660 Q6ZQT7 251 aa11.51□□□□□ -0.57
LINC00404-201ENST00000418660 ARL6IP6Q8N6S5 226 aa11.51□□□□□ -0.57
LINC00404-201ENST00000418660 INO80EQ8NBZ0 244 aaPredicted RBP11.51□□□□□ -0.57
LINC00404-201ENST00000418660 CMTM2Q8TAZ6 248 aa11.51□□□□□ -0.57
LINC00404-201ENST00000418660 TMED6Q8WW62 240 aa11.51□□□□□ -0.57
LINC00404-201ENST00000418660 GNPNAT1Q96EK6 184 aaPredicted RBP11.51□□□□□ -0.57
LINC00404-201ENST00000418660 C18orf15Q96N68 181 aa11.51□□□□□ -0.57
LINC00404-201ENST00000418660 TRAV26-1A0A087WT03 109 aa11.5□□□□□ -0.57
LINC00404-201ENST00000418660 HMGB3O15347 200 aaKnown RBP11.5□□□□□ -0.57
LINC00404-201ENST00000418660 CDC34P49427 236 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms