RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 CT45A10P0DMU9 189 aa7.56□□□□□ -1.2
RFC1-203ENST00000418436 CDKN1BP46527 198 aa7.56□□□□□ -1.2
RFC1-203ENST00000418436 RANP62826 216 aaKnown RBP7.56□□□□□ -1.2
RFC1-203ENST00000418436 C9orf47Q6ZRZ4 202 aa7.56□□□□□ -1.2
RFC1-203ENST00000418436 BAP18Q8IXM2 172 aa7.56□□□□□ -1.2
RFC1-203ENST00000418436 C11orf45Q8TAV5 145 aa7.56□□□□□ -1.2
RFC1-203ENST00000418436 FAM19A4Q96LR4 140 aa7.56□□□□□ -1.2
RFC1-203ENST00000418436 LINC00477Q96M19 166 aa7.56□□□□□ -1.2
RFC1-203ENST00000418436 ARPC5LQ9BPX5 153 aa7.56□□□□□ -1.2
RFC1-203ENST00000418436 ACTR3CQ9C0K3 210 aaPredicted RBP7.56□□□□□ -1.2
RFC1-203ENST00000418436 Q9H3A6 140 aa7.56□□□□□ -1.2
RFC1-203ENST00000418436 PPP1R14DQ9NXH3 145 aa7.56□□□□□ -1.2
RFC1-203ENST00000418436 TRAV12-2A0A075B6T6 113 aa7.55□□□□□ -1.2
RFC1-203ENST00000418436 IGHV3OR16-12A0A075B7B8 117 aa7.55□□□□□ -1.2
RFC1-203ENST00000418436 HMGB3O15347 200 aaKnown RBP7.55□□□□□ -1.2
RFC1-203ENST00000418436 ARL14EPLP0DKL9 152 aa7.55□□□□□ -1.2
RFC1-203ENST00000418436 TSPOP30536 169 aa7.55□□□□□ -1.2
RFC1-203ENST00000418436 SSX7Q7RTT5 188 aa7.55□□□□□ -1.2
RFC1-203ENST00000418436 AGPAT4-IT1Q9H0P7 198 aa7.55□□□□□ -1.2
RFC1-203ENST00000418436 OTORQ9NRC9 128 aa7.55□□□□□ -1.2
RFC1-203ENST00000418436 KMT2CQ8NEZ4 4911 aaKnown RBP7.55□□□□□ -1.2
RFC1-203ENST00000418436 DYNC2H1Q8NCM8 4307 aaKnown RBP7.55□□□□□ -1.2
RFC1-203ENST00000418436 TMEM189A5PLL7 270 aa7.54□□□□□ -1.2
RFC1-203ENST00000418436 RBAKDNA6NC62 111 aa7.54□□□□□ -1.2
RFC1-203ENST00000418436 BCL2L11O43521 198 aa7.54□□□□□ -1.2
RFC1-203ENST00000418436 HBE1P02100 147 aa7.54□□□□□ -1.2
RFC1-203ENST00000418436 SLC25A5P05141 298 aaKnown RBP7.54□□□□□ -1.2
RFC1-203ENST00000418436 GCHFRP30047 84 aa7.54□□□□□ -1.2
RFC1-203ENST00000418436 NANOS2P60321 138 aaKnown RBP7.54□□□□□ -1.2
RFC1-203ENST00000418436 ERCC8Q13216 396 aa7.54□□□□□ -1.2
RFC1-203ENST00000418436 KIR3DS1Q14943 382 aa7.54□□□□□ -1.2
RFC1-203ENST00000418436 ZNF726P1Q15940 193 aa7.54□□□□□ -1.2
RFC1-203ENST00000418436 TMUB2Q71RG4 321 aa7.54□□□□□ -1.2
RFC1-203ENST00000418436 TMEM256Q8N2U0 113 aa7.54□□□□□ -1.2
RFC1-203ENST00000418436 ARL6IP6Q8N6S5 226 aa7.54□□□□□ -1.2
RFC1-203ENST00000418436 RXFP4Q8TDU9 374 aa7.54□□□□□ -1.2
RFC1-203ENST00000418436 VGLL1Q99990 258 aa7.54□□□□□ -1.2
RFC1-203ENST00000418436 C20orf144Q9BQM9 153 aa7.54□□□□□ -1.2
RFC1-203ENST00000418436 TENM2Q9NT68 2774 aa7.54□□□□□ -1.2
RFC1-203ENST00000418436 IGKV2-40A0A087WW87 121 aaPredicted RBP7.53□□□□□ -1.2
RFC1-203ENST00000418436 CTXND1A0A1B0GTU2 59 aa7.53□□□□□ -1.2
RFC1-203ENST00000418436 KANTRA0A1W2PQU2 76 aa7.53□□□□□ -1.2
RFC1-203ENST00000418436 PGPA6NDG6 321 aa7.53□□□□□ -1.2
RFC1-203ENST00000418436 CXorf65A6NEN9 183 aa7.53□□□□□ -1.2
RFC1-203ENST00000418436 KLLNB2CW77 178 aa7.53□□□□□ -1.2
RFC1-203ENST00000418436 DIRC3C9JPN6 131 aa7.53□□□□□ -1.2
RFC1-203ENST00000418436 CXorf1O96002 111 aa7.53□□□□□ -1.2
RFC1-203ENST00000418436 IGKV2D-40P01614 121 aaPredicted RBP7.53□□□□□ -1.2
RFC1-203ENST00000418436 C1QBP02746 253 aa7.53□□□□□ -1.2
RFC1-203ENST00000418436 NMBP08949 121 aa7.53□□□□□ -1.2
RFC1-203ENST00000418436 SEC11BP0C7V7 166 aa7.53□□□□□ -1.2
RFC1-203ENST00000418436 CRISP2P16562 243 aa7.53□□□□□ -1.2
RFC1-203ENST00000418436 LEPP41159 167 aa7.53□□□□□ -1.2
RFC1-203ENST00000418436 CSN1S1P47710 185 aa7.53□□□□□ -1.2
RFC1-203ENST00000418436 PMS2P11Q13670 270 aa7.53□□□□□ -1.2
RFC1-203ENST00000418436 RRN3P1Q2M238 152 aa7.53□□□□□ -1.2
RFC1-203ENST00000418436 AKR1C8PQ5T2L2 129 aa7.53□□□□□ -1.2
RFC1-203ENST00000418436 GFI1BQ5VTD9 330 aa7.53□□□□□ -1.2
RFC1-203ENST00000418436 CEMP1Q6PRD7 247 aaPredicted RBP7.53□□□□□ -1.2
RFC1-203ENST00000418436 TMEM208Q9BTX3 173 aa7.53□□□□□ -1.2
RFC1-203ENST00000418436 ZNF492Q9P255 531 aa7.53□□□□□ -1.2
RFC1-203ENST00000418436 CELA1Q9UNI1 258 aa7.53□□□□□ -1.2
RFC1-203ENST00000418436 TRBV7-9A0A0J9YWB2 115 aa7.52□□□□□ -1.21
RFC1-203ENST00000418436 LOC102723971A0A1B0GUV8 181 aa7.52□□□□□ -1.21
RFC1-203ENST00000418436 NUPR2A6NF83 97 aa7.52□□□□□ -1.21
RFC1-203ENST00000418436 ZNF705GA8MUZ8 300 aaPredicted RBP7.52□□□□□ -1.21
RFC1-203ENST00000418436 H7BYZ3 331 aa7.52□□□□□ -1.21
RFC1-203ENST00000418436 PRM2P04554 102 aa7.52□□□□□ -1.21
RFC1-203ENST00000418436 ZNF138P52744 262 aa7.52□□□□□ -1.21
RFC1-203ENST00000418436 TAS2R60P59551 318 aa7.52□□□□□ -1.21
RFC1-203ENST00000418436 LGALSLQ3ZCW2 172 aaPredicted RBP7.52□□□□□ -1.21
RFC1-203ENST00000418436 FAM74A1Q5RGS3 127 aa7.52□□□□□ -1.21
RFC1-203ENST00000418436 TMEM78Q5T7P6 136 aa7.52□□□□□ -1.21
RFC1-203ENST00000418436 PHLDA1Q8WV24 401 aaPredicted RBP7.52□□□□□ -1.21
RFC1-203ENST00000418436 LINC01587Q99440 93 aa7.52□□□□□ -1.21
RFC1-203ENST00000418436 ZNF471Q9BX82 626 aaPredicted RBP7.52□□□□□ -1.21
RFC1-203ENST00000418436 TMEM167BQ9NRX6 74 aa7.52□□□□□ -1.21
RFC1-203ENST00000418436 PLECQ15149 4684 aaKnown RBP7.51□□□□□ -1.21
RFC1-203ENST00000418436 hCG_2014768A0A024R1R8 64 aa7.51□□□□□ -1.21
RFC1-203ENST00000418436 PLAC8L1A1L4L8 177 aa7.51□□□□□ -1.21
RFC1-203ENST00000418436 SPART-AS1P0CW21 52 aa7.51□□□□□ -1.21
RFC1-203ENST00000418436 AZU1P20160 251 aa7.51□□□□□ -1.21
RFC1-203ENST00000418436 LINC00310P59036 64 aa7.51□□□□□ -1.21
RFC1-203ENST00000418436 EIF5AP63241 154 aaKnown RBP7.51□□□□□ -1.21
RFC1-203ENST00000418436 C12orf74Q32Q52 190 aa7.51□□□□□ -1.21
RFC1-203ENST00000418436 LCE4AQ5TA78 99 aa7.51□□□□□ -1.21
RFC1-203ENST00000418436 AKAP14Q86UN6 197 aa7.51□□□□□ -1.21
RFC1-203ENST00000418436 ZFAND2AQ8N6M9 145 aa7.51□□□□□ -1.21
RFC1-203ENST00000418436 STOML3Q8TAV4 291 aa7.51□□□□□ -1.21
RFC1-203ENST00000418436 TMED6Q8WW62 240 aa7.51□□□□□ -1.21
RFC1-203ENST00000418436 HYLS1Q96M11 299 aa7.51□□□□□ -1.21
RFC1-203ENST00000418436 DKK2Q9UBU2 259 aa7.51□□□□□ -1.21
RFC1-203ENST00000418436 LYSTQ99698 3801 aa7.51□□□□□ -1.21
RFC1-203ENST00000418436 TRAV12-3A0A0B4J271 114 aa7.5□□□□□ -1.21
RFC1-203ENST00000418436 TEX48A0A1B0GUV7 120 aa7.5□□□□□ -1.21
RFC1-203ENST00000418436 A0A1W2PRE2 83 aa7.5□□□□□ -1.21
RFC1-203ENST00000418436 C7orf71A4D174 169 aa7.5□□□□□ -1.21
RFC1-203ENST00000418436 UMAD1C9J7I0 102 aa7.5□□□□□ -1.21
RFC1-203ENST00000418436 C11orf94C9JXX5 98 aa7.5□□□□□ -1.21
RFC1-203ENST00000418436 PFDN1O60925 122 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms