RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 RSPO1Q2MKA7 263 aaPredicted RBP12.47□□□□□ -0.41
PHRF1-203ENST00000416188 LINC01559Q495D7 138 aa12.47□□□□□ -0.41
PHRF1-203ENST00000416188 CCDC168Q8NDH2 2452 aa12.47□□□□□ -0.41
PHRF1-203ENST00000416188 ERG28Q9UKR5 140 aa12.46□□□□□ -0.41
PHRF1-203ENST00000416188 ARMS2P0C7Q2 107 aa12.46□□□□□ -0.41
PHRF1-203ENST00000416188 TEX43Q6ZNM6 134 aa12.46□□□□□ -0.41
PHRF1-203ENST00000416188 VGLL1Q99990 258 aa12.46□□□□□ -0.41
PHRF1-203ENST00000416188 SRSF8Q9BRL6 282 aaKnown RBP12.46□□□□□ -0.41
PHRF1-203ENST00000416188 NCOR1P1Q9H4R4 102 aa12.46□□□□□ -0.41
PHRF1-203ENST00000416188 SAMD5Q5TGI4 173 aa12.46□□□□□ -0.41
PHRF1-203ENST00000416188 DEFB131AP59861 70 aa12.46□□□□□ -0.42
PHRF1-203ENST00000416188 CKS1BP61024 79 aa12.46□□□□□ -0.42
PHRF1-203ENST00000416188 C19orf84I3L1E1 186 aa12.45□□□□□ -0.42
PHRF1-203ENST00000416188 PAX9P55771 341 aa12.45□□□□□ -0.42
PHRF1-203ENST00000416188 NDUFA4L2Q9NRX3 87 aa12.45□□□□□ -0.42
PHRF1-203ENST00000416188 M0R2P5 195 aa12.45□□□□□ -0.42
PHRF1-203ENST00000416188 C17orf58Q2M2W7 97 aa12.45□□□□□ -0.42
PHRF1-203ENST00000416188 ZC2HC1BQ5TFG8 222 aa12.45□□□□□ -0.42
PHRF1-203ENST00000416188 HIST2H2BCQ6DN03 193 aa12.45□□□□□ -0.42
PHRF1-203ENST00000416188 DENND4CQ5VZ89 1909 aa12.45□□□□□ -0.42
PHRF1-203ENST00000416188 A0A1B0GV72 72 aa12.45□□□□□ -0.42
PHRF1-203ENST00000416188 TMEM238C9JI98 176 aa12.45□□□□□ -0.42
PHRF1-203ENST00000416188 SYS1-DBNDD2H3BUS1 97 aa12.45□□□□□ -0.42
PHRF1-203ENST00000416188 CTSZQ9UBR2 303 aa12.45□□□□□ -0.42
PHRF1-203ENST00000416188 A0A087X0K7 114 aa12.45□□□□□ -0.42
PHRF1-203ENST00000416188 INSP01308 110 aa12.45□□□□□ -0.42
PHRF1-203ENST00000416188 IGKV1-39P01597 117 aa12.45□□□□□ -0.42
PHRF1-203ENST00000416188 IGKV1D-39P04432 117 aa12.45□□□□□ -0.42
PHRF1-203ENST00000416188 PDE6HQ13956 83 aa12.45□□□□□ -0.42
PHRF1-203ENST00000416188 PHLDA1Q8WV24 401 aaPredicted RBP12.45□□□□□ -0.42
PHRF1-203ENST00000416188 MYO18BQ8IUG5 2567 aa12.44□□□□□ -0.42
PHRF1-203ENST00000416188 HOXB4P17483 251 aaPredicted RBP12.44□□□□□ -0.42
PHRF1-203ENST00000416188 S100A7L2Q5SY68 101 aa12.44□□□□□ -0.42
PHRF1-203ENST00000416188 MRPL27Q9P0M9 148 aaKnown RBP12.44□□□□□ -0.42
PHRF1-203ENST00000416188 A0A1B0GUS0 222 aa12.44□□□□□ -0.42
PHRF1-203ENST00000416188 IGHV4-38-2P0DP08 117 aa12.44□□□□□ -0.42
PHRF1-203ENST00000416188 A8MWV9 139 aa12.44□□□□□ -0.42
PHRF1-203ENST00000416188 PAX4O43316 350 aa12.44□□□□□ -0.42
PHRF1-203ENST00000416188 ELANEP08246 267 aa12.44□□□□□ -0.42
PHRF1-203ENST00000416188 GHRHP01286 108 aa12.43□□□□□ -0.42
PHRF1-203ENST00000416188 GGTLC3B5MD39 225 aa12.43□□□□□ -0.42
PHRF1-203ENST00000416188 EREGO14944 169 aa12.43□□□□□ -0.42
PHRF1-203ENST00000416188 ANAPC10Q9UM13 185 aa12.43□□□□□ -0.42
PHRF1-203ENST00000416188 TRAV13-1A0A0B4J241 112 aa12.43□□□□□ -0.42
PHRF1-203ENST00000416188 MPV17L2Q567V2 206 aa12.43□□□□□ -0.42
PHRF1-203ENST00000416188 JPT2Q9H910 190 aa12.43□□□□□ -0.42
PHRF1-203ENST00000416188 TSSC4Q9Y5U2 329 aaPredicted RBP12.43□□□□□ -0.42
PHRF1-203ENST00000416188 DEFB130BP0DP73 79 aa12.43□□□□□ -0.42
PHRF1-203ENST00000416188 DEFB130AP0DP74 79 aa12.43□□□□□ -0.42
PHRF1-203ENST00000416188 LINC00311Q8N616 119 aa12.43□□□□□ -0.42
PHRF1-203ENST00000416188 PLEKHB2Q96CS7 222 aa12.43□□□□□ -0.42
PHRF1-203ENST00000416188 MMP23AO75900 390 aa12.42□□□□□ -0.42
PHRF1-203ENST00000416188 MRAPQ8TCY5 172 aa12.42□□□□□ -0.42
PHRF1-203ENST00000416188 CYYR1Q96J86 154 aa12.42□□□□□ -0.42
PHRF1-203ENST00000416188 TMEM213A2RRL7 107 aa12.42□□□□□ -0.42
PHRF1-203ENST00000416188 GAGE13Q4V321 117 aa12.42□□□□□ -0.42
PHRF1-203ENST00000416188 KNCNA6PVL3 124 aa12.42□□□□□ -0.42
PHRF1-203ENST00000416188 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.42□□□□□ -0.42
PHRF1-203ENST00000416188 ZNF833PQ6ZTB9 187 aa12.42□□□□□ -0.42
PHRF1-203ENST00000416188 YPEL3P61236 119 aaPredicted RBP12.41□□□□□ -0.42
PHRF1-203ENST00000416188 NAV2Q8IVL1 2488 aa12.41□□□□□ -0.42
PHRF1-203ENST00000416188 CST9LQ9H4G1 147 aa12.41□□□□□ -0.42
PHRF1-203ENST00000416188 TPSG1Q9NRR2 321 aa12.41□□□□□ -0.42
PHRF1-203ENST00000416188 ZNF134P52741 427 aa12.41□□□□□ -0.42
PHRF1-203ENST00000416188 ZMAT4Q9H898 229 aa12.41□□□□□ -0.42
PHRF1-203ENST00000416188 TNFRSF6BO95407 300 aa12.4□□□□□ -0.42
PHRF1-203ENST00000416188 WT1-ASQ06250 92 aa12.4□□□□□ -0.42
PHRF1-203ENST00000416188 LURAP1LQ8IV03 231 aa12.4□□□□□ -0.42
PHRF1-203ENST00000416188 GATD1Q8NB37 220 aa12.4□□□□□ -0.42
PHRF1-203ENST00000416188 C6orf226Q5I0X4 101 aa12.4□□□□□ -0.42
PHRF1-203ENST00000416188 XCL2Q9UBD3 114 aa12.4□□□□□ -0.42
PHRF1-203ENST00000416188 TCTEX1D4Q5JR98 221 aa12.4□□□□□ -0.42
PHRF1-203ENST00000416188 ATXN8Q156A1 80 aa12.4□□□□□ -0.43
PHRF1-203ENST00000416188 SPINK13Q1W4C9 94 aa12.4□□□□□ -0.43
PHRF1-203ENST00000416188 RASL10AQ92737 203 aa12.4□□□□□ -0.43
PHRF1-203ENST00000416188 C8orf49Q96NF6 230 aa12.4□□□□□ -0.43
PHRF1-203ENST00000416188 WNK1Q9H4A3 2382 aa12.39□□□□□ -0.43
PHRF1-203ENST00000416188 TRBV19A0A075B6N1 114 aa12.39□□□□□ -0.43
PHRF1-203ENST00000416188 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.39□□□□□ -0.43
PHRF1-203ENST00000416188 PLA2G2AP14555 144 aa12.39□□□□□ -0.43
PHRF1-203ENST00000416188 SPRNQ5BIV9 151 aa12.39□□□□□ -0.43
PHRF1-203ENST00000416188 C15orf65H3BRN8 121 aa12.39□□□□□ -0.43
PHRF1-203ENST00000416188 DIAPH2-AS1Q14236 149 aa12.39□□□□□ -0.43
PHRF1-203ENST00000416188 SPXQ9BT56 116 aa12.39□□□□□ -0.43
PHRF1-203ENST00000416188 A8MWP6 167 aa12.39□□□□□ -0.43
PHRF1-203ENST00000416188 PFN1P07737 140 aaKnown RBP12.39□□□□□ -0.43
PHRF1-203ENST00000416188 GFRA4Q9GZZ7 299 aa12.39□□□□□ -0.43
PHRF1-203ENST00000416188 ZNF726P1Q15940 193 aa12.38□□□□□ -0.43
PHRF1-203ENST00000416188 CENPVL3A0A0U1RRI6 287 aa12.38□□□□□ -0.43
PHRF1-203ENST00000416188 STPG4Q8N801 248 aa12.38□□□□□ -0.43
PHRF1-203ENST00000416188 LRRC75A-AS1Q8N1F1 130 aa12.37□□□□□ -0.43
PHRF1-203ENST00000416188 APOC4P55056 127 aa12.37□□□□□ -0.43
PHRF1-203ENST00000416188 TMEM75Q8N9X5 138 aa12.37□□□□□ -0.43
PHRF1-203ENST00000416188 WFDC11Q8NEX6 87 aa12.37□□□□□ -0.43
PHRF1-203ENST00000416188 TRAV8-4A0A0B4J246 113 aa12.36□□□□□ -0.43
PHRF1-203ENST00000416188 HAPLN4Q86UW8 402 aa12.36□□□□□ -0.43
PHRF1-203ENST00000416188 ZNF492Q9P255 531 aa12.36□□□□□ -0.43
PHRF1-203ENST00000416188 CHD8Q9HCK8 2581 aa12.36□□□□□ -0.43
PHRF1-203ENST00000416188 PRIMA1Q86XR5 153 aa12.36□□□□□ -0.43
PHRF1-203ENST00000416188 LY6G5BQ8NDX9 201 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms