RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 PRB4P10163 310 aaPredicted RBP6.26□□□□□ -1.41
RBM39-208ENST00000416108 MGST1P10620 155 aaKnown RBP6.26□□□□□ -1.41
RBM39-208ENST00000416108 ZNF138P52744 262 aa6.26□□□□□ -1.41
RBM39-208ENST00000416108 ERCC8Q13216 396 aa6.26□□□□□ -1.41
RBM39-208ENST00000416108 ODF3L2Q3SX64 289 aa6.26□□□□□ -1.41
RBM39-208ENST00000416108 CENPWQ5EE01 88 aa6.26□□□□□ -1.41
RBM39-208ENST00000416108 ACTL10Q5JWF8 245 aa6.26□□□□□ -1.41
RBM39-208ENST00000416108 SAPCD1Q5SSQ6 148 aa6.26□□□□□ -1.41
RBM39-208ENST00000416108 C9orf47Q6ZRZ4 202 aa6.26□□□□□ -1.41
RBM39-208ENST00000416108 Q86TA4 180 aa6.26□□□□□ -1.41
RBM39-208ENST00000416108 BAGE2Q86Y30 109 aa6.26□□□□□ -1.41
RBM39-208ENST00000416108 APRG1Q8IVJ8 170 aa6.26□□□□□ -1.41
RBM39-208ENST00000416108 VGLL1Q99990 258 aa6.26□□□□□ -1.41
RBM39-208ENST00000416108 DERL1Q9BUN8 251 aa6.26□□□□□ -1.41
RBM39-208ENST00000416108 SEC11CQ9BY50 192 aa6.26□□□□□ -1.41
RBM39-208ENST00000416108 BIN3Q9NQY0 253 aa6.26□□□□□ -1.41
RBM39-208ENST00000416108 NAT8Q9UHE5 227 aa6.26□□□□□ -1.41
RBM39-208ENST00000416108 ZFP30Q9Y2G7 519 aa6.26□□□□□ -1.41
RBM39-208ENST00000416108 NOTCH3Q9UM47 2321 aa6.26□□□□□ -1.41
RBM39-208ENST00000416108 TRAV8-1A0A0A6YYK1 113 aa6.25□□□□□ -1.41
RBM39-208ENST00000416108 C9JCJ5 164 aa6.25□□□□□ -1.41
RBM39-208ENST00000416108 IGKV3-20P01619 116 aa6.25□□□□□ -1.41
RBM39-208ENST00000416108 HLA-DRB4P13762 266 aa6.25□□□□□ -1.41
RBM39-208ENST00000416108 TSPOP30536 169 aa6.25□□□□□ -1.41
RBM39-208ENST00000416108 LEPP41159 167 aa6.25□□□□□ -1.41
RBM39-208ENST00000416108 DEFB1P60022 68 aa6.25□□□□□ -1.41
RBM39-208ENST00000416108 TMEM241Q24JQ0 296 aa6.25□□□□□ -1.41
RBM39-208ENST00000416108 Q8TAT8 98 aa6.25□□□□□ -1.41
RBM39-208ENST00000416108 SMIM12Q96EX1 92 aa6.25□□□□□ -1.41
RBM39-208ENST00000416108 LINC00479Q96M42 142 aa6.25□□□□□ -1.41
RBM39-208ENST00000416108 AGPAT4-IT1Q9H0P7 198 aa6.25□□□□□ -1.41
RBM39-208ENST00000416108 ZNF492Q9P255 531 aa6.25□□□□□ -1.41
RBM39-208ENST00000416108 KLF12Q9Y4X4 402 aa6.25□□□□□ -1.41
RBM39-208ENST00000416108 LENEPQ9Y5L5 61 aa6.25□□□□□ -1.41
RBM39-208ENST00000416108 HLA-DRB4X5D2U9 266 aa6.25□□□□□ -1.41
RBM39-208ENST00000416108 M0R036 132 aa6.24□□□□□ -1.41
RBM39-208ENST00000416108 ATP6V1G1O75348 118 aa6.24□□□□□ -1.41
RBM39-208ENST00000416108 NUTF2P61970 127 aaKnown RBP6.24□□□□□ -1.41
RBM39-208ENST00000416108 PNRC1Q12796 327 aaPredicted RBP6.24□□□□□ -1.41
RBM39-208ENST00000416108 ADIRFQ15847 76 aa6.24□□□□□ -1.41
RBM39-208ENST00000416108 ZNF124Q15973 351 aa6.24□□□□□ -1.41
RBM39-208ENST00000416108 SMUG1Q53HV7 270 aa6.24□□□□□ -1.41
RBM39-208ENST00000416108 SAMD5Q5TGI4 173 aa6.24□□□□□ -1.41
RBM39-208ENST00000416108 GDF5OSQ5U4N7 250 aa6.24□□□□□ -1.41
RBM39-208ENST00000416108 TMEM183AQ8IXX5 376 aa6.24□□□□□ -1.41
RBM39-208ENST00000416108 NHLRC2Q8NBF2 726 aa6.24□□□□□ -1.41
RBM39-208ENST00000416108 TVP23CQ96ET8 276 aa6.24□□□□□ -1.41
RBM39-208ENST00000416108 IGF2BP2-AS1Q96M15 143 aa6.24□□□□□ -1.41
RBM39-208ENST00000416108 ODF3Q96PU9 254 aa6.24□□□□□ -1.41
RBM39-208ENST00000416108 PRR25Q96S07 402 aa6.24□□□□□ -1.41
RBM39-208ENST00000416108 LY96Q9Y6Y9 160 aa6.24□□□□□ -1.41
RBM39-208ENST00000416108 TENM1Q9UKZ4 2725 aa6.24□□□□□ -1.41
RBM39-208ENST00000416108 TRBV7-9A0A0J9YWB2 115 aa6.23□□□□□ -1.41
RBM39-208ENST00000416108 G3V4G9 280 aa6.23□□□□□ -1.41
RBM39-208ENST00000416108 H3BMM0 161 aa6.23□□□□□ -1.41
RBM39-208ENST00000416108 J3KRW8 73 aa6.23□□□□□ -1.41
RBM39-208ENST00000416108 LTAP01374 205 aa6.23□□□□□ -1.41
RBM39-208ENST00000416108 IGLV2-11P01706 119 aa6.23□□□□□ -1.41
RBM39-208ENST00000416108 APOC3P02656 99 aa6.23□□□□□ -1.41
RBM39-208ENST00000416108 GPX1P07203 203 aa6.23□□□□□ -1.41
RBM39-208ENST00000416108 ADCYAP1P18509 176 aa6.23□□□□□ -1.41
RBM39-208ENST00000416108 S100A1P23297 94 aa6.23□□□□□ -1.41
RBM39-208ENST00000416108 EGFEM1PQ0D2K5 195 aa6.23□□□□□ -1.41
RBM39-208ENST00000416108 PRR27Q6MZM9 219 aa6.23□□□□□ -1.41
RBM39-208ENST00000416108 MORN3Q6PF18 240 aaPredicted RBP6.23□□□□□ -1.41
RBM39-208ENST00000416108 DAZAP1Q96EP5 407 aaKnown RBP6.23□□□□□ -1.41
RBM39-208ENST00000416108 WFDC10AQ9H1F0 79 aa6.23□□□□□ -1.41
RBM39-208ENST00000416108 TUBA4BQ9H853 241 aa6.23□□□□□ -1.41
RBM39-208ENST00000416108 SRD5A3Q9H8P0 318 aa6.23□□□□□ -1.41
RBM39-208ENST00000416108 SDF2L1Q9HCN8 221 aa6.23□□□□□ -1.41
RBM39-208ENST00000416108 CARHSP1Q9Y2V2 147 aaKnown RBP6.23□□□□□ -1.41
RBM39-208ENST00000416108 PGPEP1LA6NFU8 196 aa6.22□□□□□ -1.41
RBM39-208ENST00000416108 SNAPINO95295 136 aa6.22□□□□□ -1.41
RBM39-208ENST00000416108 GCGP01275 180 aa6.22□□□□□ -1.41
RBM39-208ENST00000416108 AMBPP02760 352 aa6.22□□□□□ -1.41
RBM39-208ENST00000416108 RPL35AP18077 110 aaKnown RBP6.22□□□□□ -1.41
RBM39-208ENST00000416108 CDKN1BP46527 198 aa6.22□□□□□ -1.41
RBM39-208ENST00000416108 RPL23P62829 140 aaKnown RBP6.22□□□□□ -1.41
RBM39-208ENST00000416108 SPINK13Q1W4C9 94 aa6.22□□□□□ -1.41
RBM39-208ENST00000416108 TRPT1Q86TN4 253 aaKnown RBP6.22□□□□□ -1.41
RBM39-208ENST00000416108 SVBPQ8N300 66 aa6.22□□□□□ -1.41
RBM39-208ENST00000416108 DEFB125Q8N687 156 aa6.22□□□□□ -1.41
RBM39-208ENST00000416108 C15orf54Q8N8G6 183 aa6.22□□□□□ -1.41
RBM39-208ENST00000416108 OCC1Q8TAD7 63 aa6.22□□□□□ -1.41
RBM39-208ENST00000416108 C8orf49Q96NF6 230 aa6.22□□□□□ -1.41
RBM39-208ENST00000416108 CLUHP3Q96NS8 147 aa6.22□□□□□ -1.41
RBM39-208ENST00000416108 ASCL2Q99929 193 aa6.22□□□□□ -1.41
RBM39-208ENST00000416108 AURKAIP1Q9NWT8 199 aaPredicted RBP6.22□□□□□ -1.41
RBM39-208ENST00000416108 FBN1P35555 2871 aaKnown RBP6.22□□□□□ -1.41
RBM39-208ENST00000416108 TRBV20OR9-2A0A075B6H5 130 aa6.21□□□□□ -1.42
RBM39-208ENST00000416108 LOC102724200A0A096LPH7 203 aaPredicted RBP6.21□□□□□ -1.42
RBM39-208ENST00000416108 C7orf71A4D174 169 aa6.21□□□□□ -1.42
RBM39-208ENST00000416108 CRISP2P16562 243 aa6.21□□□□□ -1.42
RBM39-208ENST00000416108 RNASE4P34096 147 aaKnown RBP6.21□□□□□ -1.42
RBM39-208ENST00000416108 FXYD7P58549 80 aa6.21□□□□□ -1.42
RBM39-208ENST00000416108 ERVFC1-1P60608 527 aa6.21□□□□□ -1.42
RBM39-208ENST00000416108 C10orf91Q5T1B1 145 aa6.21□□□□□ -1.42
RBM39-208ENST00000416108 LINC01551Q86U37 167 aa6.21□□□□□ -1.42
RBM39-208ENST00000416108 ZC2HC1AQ96GY0 325 aa6.21□□□□□ -1.42
RBM39-208ENST00000416108 C1QTNF4Q9BXJ3 329 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 156.1 ms