RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 GCSHP23434 173 aa13.68□□□□□ -0.22
SDCBP-202ENST00000413219 FXYD2P54710 66 aa13.68□□□□□ -0.22
SDCBP-202ENST00000413219 HES1Q14469 280 aa13.68□□□□□ -0.22
SDCBP-202ENST00000413219 TM2D2Q9BX73 214 aa13.67□□□□□ -0.22
SDCBP-202ENST00000413219 A0A1W2PRD5 423 aa13.67□□□□□ -0.22
SDCBP-202ENST00000413219 A0A1W2PRF3 423 aa13.67□□□□□ -0.22
SDCBP-202ENST00000413219 A0A1W2PRM7 423 aa13.67□□□□□ -0.22
SDCBP-202ENST00000413219 TMEM238C9JI98 176 aa13.67□□□□□ -0.22
SDCBP-202ENST00000413219 RAB9AP51151 201 aa13.67□□□□□ -0.22
SDCBP-202ENST00000413219 ZNF672Q499Z4 452 aaPredicted RBP13.67□□□□□ -0.22
SDCBP-202ENST00000413219 PKDREJQ9NTG1 2253 aa13.66□□□□□ -0.22
SDCBP-202ENST00000413219 IGLV2-18A0A075B6J9 118 aa13.66□□□□□ -0.22
SDCBP-202ENST00000413219 PRSS47A8MTI9 375 aa13.66□□□□□ -0.22
SDCBP-202ENST00000413219 NDPQ00604 133 aa13.66□□□□□ -0.22
SDCBP-202ENST00000413219 PHLDA1Q8WV24 401 aaPredicted RBP13.66□□□□□ -0.22
SDCBP-202ENST00000413219 TMEM158Q8WZ71 300 aa13.66□□□□□ -0.22
SDCBP-202ENST00000413219 TRBV25-1A0A075B6N4 114 aa13.65□□□□□ -0.22
SDCBP-202ENST00000413219 GAS8-AS1O95177 125 aa13.65□□□□□ -0.22
SDCBP-202ENST00000413219 HLA-DMBP28068 263 aa13.65□□□□□ -0.22
SDCBP-202ENST00000413219 CCDC144NLQ6NUI1 221 aa13.65□□□□□ -0.22
SDCBP-202ENST00000413219 DYNAPQ8N1N2 210 aa13.65□□□□□ -0.22
SDCBP-202ENST00000413219 FOXC2Q99958 501 aa13.65□□□□□ -0.22
SDCBP-202ENST00000413219 RP1L1Q8IWN7 2480 aaPredicted RBP13.65□□□□□ -0.22
SDCBP-202ENST00000413219 PRTN3P24158 256 aa13.65□□□□□ -0.22
SDCBP-202ENST00000413219 TM4SF20Q53R12 229 aa13.65□□□□□ -0.22
SDCBP-202ENST00000413219 IGFL4Q6B9Z1 124 aa13.65□□□□□ -0.22
SDCBP-202ENST00000413219 DTX2Q86UW9 622 aa13.65□□□□□ -0.22
SDCBP-202ENST00000413219 Q8N6K4 173 aa13.65□□□□□ -0.22
SDCBP-202ENST00000413219 Q8NA96 180 aa13.65□□□□□ -0.22
SDCBP-202ENST00000413219 OOSP1A8MZH6 123 aa13.64□□□□□ -0.23
SDCBP-202ENST00000413219 TAL2Q16559 108 aa13.64□□□□□ -0.23
SDCBP-202ENST00000413219 CEND1Q8N111 149 aa13.64□□□□□ -0.23
SDCBP-202ENST00000413219 BDP1A6H8Y1 2624 aa13.64□□□□□ -0.23
SDCBP-202ENST00000413219 IGHV3-23P01764 117 aa13.63□□□□□ -0.23
SDCBP-202ENST00000413219 ZC2HC1BQ5TFG8 222 aa13.63□□□□□ -0.23
SDCBP-202ENST00000413219 SLC50A1Q9BRV3 221 aa13.63□□□□□ -0.23
SDCBP-202ENST00000413219 KLRD1Q13241 179 aa13.63□□□□□ -0.23
SDCBP-202ENST00000413219 EBI3Q14213 229 aa13.63□□□□□ -0.23
SDCBP-202ENST00000413219 IL17RELQ6ZVW7 336 aa13.63□□□□□ -0.23
SDCBP-202ENST00000413219 SELENOKQ9Y6D0 94 aa13.63□□□□□ -0.23
SDCBP-202ENST00000413219 TMEM8BA6NDV4 472 aa13.62□□□□□ -0.23
SDCBP-202ENST00000413219 ERCC8Q13216 396 aa13.62□□□□□ -0.23
SDCBP-202ENST00000413219 GTSCR1Q86UQ5 136 aa13.62□□□□□ -0.23
SDCBP-202ENST00000413219 ZFHX4Q86UP3 3567 aa13.62□□□□□ -0.23
SDCBP-202ENST00000413219 NCBP2LA6PVI3 153 aaKnown RBP13.62□□□□□ -0.23
SDCBP-202ENST00000413219 TTTY13Q9BZ97 58 aa13.62□□□□□ -0.23
SDCBP-202ENST00000413219 OTOGLQ3ZCN5 2332 aa13.61□□□□□ -0.23
SDCBP-202ENST00000413219 PRAC2D3DTV9 90 aa13.61□□□□□ -0.23
SDCBP-202ENST00000413219 GATA1P15976 413 aaPredicted RBP13.61□□□□□ -0.23
SDCBP-202ENST00000413219 KLK9Q2XQG4 91 aa13.61□□□□□ -0.23
SDCBP-202ENST00000413219 MYOZ3Q8TDC0 251 aa13.61□□□□□ -0.23
SDCBP-202ENST00000413219 KLK9Q9UKQ9 250 aa13.61□□□□□ -0.23
SDCBP-202ENST00000413219 IGKV3D-20A0A0C4DH25 116 aa13.6□□□□□ -0.23
SDCBP-202ENST00000413219 E9PLD3 99 aa13.6□□□□□ -0.23
SDCBP-202ENST00000413219 LAGE3Q14657 143 aa13.6□□□□□ -0.23
SDCBP-202ENST00000413219 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.6□□□□□ -0.23
SDCBP-202ENST00000413219 TIMD4Q96H15 378 aa13.6□□□□□ -0.23
SDCBP-202ENST00000413219 BUB3O43684 328 aa13.6□□□□□ -0.23
SDCBP-202ENST00000413219 C1orf122Q6ZSJ8 110 aa13.6□□□□□ -0.23
SDCBP-202ENST00000413219 NRACQ8N912 160 aa13.6□□□□□ -0.23
SDCBP-202ENST00000413219 MRPL53Q96EL3 112 aaKnown RBP13.6□□□□□ -0.23
SDCBP-202ENST00000413219 VKORC1Q9BQB6 163 aa13.6□□□□□ -0.23
SDCBP-202ENST00000413219 ZFAND3Q9H8U3 227 aa13.6□□□□□ -0.23
SDCBP-202ENST00000413219 NHP2Q9NX24 153 aaKnown RBP13.6□□□□□ -0.23
SDCBP-202ENST00000413219 A0A087WX48 190 aa13.59□□□□□ -0.23
SDCBP-202ENST00000413219 MINOS1Q5TGZ0 78 aa13.59□□□□□ -0.23
SDCBP-202ENST00000413219 ZNF502Q8TBZ5 544 aa13.59□□□□□ -0.23
SDCBP-202ENST00000413219 MRPL35Q9NZE8 188 aaKnown RBP13.59□□□□□ -0.23
SDCBP-202ENST00000413219 MINOS1-NBL1R4GNA1 71 aa13.59□□□□□ -0.23
SDCBP-202ENST00000413219 CFAP47Q6ZTR5 3102 aa13.59□□□□□ -0.23
SDCBP-202ENST00000413219 IGHV4-4A0A075B6R2 117 aa13.59□□□□□ -0.23
SDCBP-202ENST00000413219 TRAV40A0A0B4J280 105 aa13.59□□□□□ -0.23
SDCBP-202ENST00000413219 K7ERJ3 54 aa13.59□□□□□ -0.23
SDCBP-202ENST00000413219 PPIFP30405 207 aaKnown RBP13.59□□□□□ -0.23
SDCBP-202ENST00000413219 RPL24P83731 157 aaKnown RBP13.59□□□□□ -0.23
SDCBP-202ENST00000413219 VMO1Q7Z5L0 202 aa13.59□□□□□ -0.23
SDCBP-202ENST00000413219 FAM110DQ8TAY7 271 aaPredicted RBP13.59□□□□□ -0.23
SDCBP-202ENST00000413219 HIF1ANQ9NWT6 349 aa13.59□□□□□ -0.23
SDCBP-202ENST00000413219 TMEM160Q9NX00 188 aa13.59□□□□□ -0.23
SDCBP-202ENST00000413219 IGHV7-81A0A0B4J1V7 117 aa13.58□□□□□ -0.24
SDCBP-202ENST00000413219 TEX48A0A1B0GUV7 120 aa13.58□□□□□ -0.24
SDCBP-202ENST00000413219 F8W1H4 67 aa13.58□□□□□ -0.24
SDCBP-202ENST00000413219 LINC01619G3V211 115 aa13.58□□□□□ -0.24
SDCBP-202ENST00000413219 PLNP26678 52 aa13.58□□□□□ -0.24
SDCBP-202ENST00000413219 C11orf21Q9P2W6 132 aa13.58□□□□□ -0.24
SDCBP-202ENST00000413219 IGLL5B9A064 214 aa13.57□□□□□ -0.24
SDCBP-202ENST00000413219 TRGV3P03979 118 aa13.57□□□□□ -0.24
SDCBP-202ENST00000413219 TMEM11P17152 192 aa13.57□□□□□ -0.24
SDCBP-202ENST00000413219 FOXI2Q6ZQN5 318 aa13.57□□□□□ -0.24
SDCBP-202ENST00000413219 AGPAT4-IT1Q9H0P7 198 aa13.57□□□□□ -0.24
SDCBP-202ENST00000413219 IGHV7-4-1A0A0J9YVY3 117 aa13.57□□□□□ -0.24
SDCBP-202ENST00000413219 GOSR1O95249 250 aa13.57□□□□□ -0.24
SDCBP-202ENST00000413219 LINC01560Q8TB33 94 aa13.57□□□□□ -0.24
SDCBP-202ENST00000413219 BOD1L1Q8NFC6 3051 aa13.57□□□□□ -0.24
SDCBP-202ENST00000413219 TRAV12-1A0A0B4J245 112 aa13.56□□□□□ -0.24
SDCBP-202ENST00000413219 SCGB1A1P11684 91 aa13.56□□□□□ -0.24
SDCBP-202ENST00000413219 TMEM78Q5T7P6 136 aa13.56□□□□□ -0.24
SDCBP-202ENST00000413219 RNF182Q8N6D2 247 aa13.56□□□□□ -0.24
SDCBP-202ENST00000413219 MAPKAPK5-AS1Q8N8E1 139 aa13.55□□□□□ -0.24
SDCBP-202ENST00000413219 MRAP2Q96G30 205 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms