RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 IQCF2Q8IXL9 164 aa11.18□□□□□ -0.62
TRAPPC12-203ENST00000411973 FAM19A4Q96LR4 140 aa11.18□□□□□ -0.62
TRAPPC12-203ENST00000411973 VGLL1Q99990 258 aa11.18□□□□□ -0.62
TRAPPC12-203ENST00000411973 GOLT1BQ9Y3E0 138 aa11.18□□□□□ -0.62
TRAPPC12-203ENST00000411973 A0A0J9YWU9 116 aa11.17□□□□□ -0.62
TRAPPC12-203ENST00000411973 GGTLC3B5MD39 225 aa11.17□□□□□ -0.62
TRAPPC12-203ENST00000411973 INSP01308 110 aa11.17□□□□□ -0.62
TRAPPC12-203ENST00000411973 LEPP41159 167 aa11.17□□□□□ -0.62
TRAPPC12-203ENST00000411973 SULT1A2P50226 295 aa11.17□□□□□ -0.62
TRAPPC12-203ENST00000411973 TMEM78Q5T7P6 136 aa11.17□□□□□ -0.62
TRAPPC12-203ENST00000411973 Q8NAQ8 132 aa11.17□□□□□ -0.62
TRAPPC12-203ENST00000411973 C5orf17Q8NAS9 161 aa11.17□□□□□ -0.62
TRAPPC12-203ENST00000411973 SFT2D1Q8WV19 159 aa11.17□□□□□ -0.62
TRAPPC12-203ENST00000411973 NKX6-2Q9C056 277 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC12-203ENST00000411973 C11orf68Q9H3H3 251 aaKnown RBP11.17□□□□□ -0.62
TRAPPC12-203ENST00000411973 ZNF492Q9P255 531 aa11.17□□□□□ -0.62
TRAPPC12-203ENST00000411973 DNAH7Q8WXX0 4024 aa11.16□□□□□ -0.62
TRAPPC12-203ENST00000411973 TRAV12-2A0A075B6T6 113 aa11.16□□□□□ -0.62
TRAPPC12-203ENST00000411973 TRBV7-9A0A0J9YWB2 115 aa11.16□□□□□ -0.62
TRAPPC12-203ENST00000411973 SERTM2A0A1B0GWG4 89 aa11.16□□□□□ -0.62
TRAPPC12-203ENST00000411973 SMIM9A6NGZ8 99 aa11.16□□□□□ -0.62
TRAPPC12-203ENST00000411973 NMBP08949 121 aa11.16□□□□□ -0.62
TRAPPC12-203ENST00000411973 H2AFB1P0C5Y9 115 aa11.16□□□□□ -0.62
TRAPPC12-203ENST00000411973 CRISP2P16562 243 aa11.16□□□□□ -0.62
TRAPPC12-203ENST00000411973 ZNF138P52744 262 aa11.16□□□□□ -0.62
TRAPPC12-203ENST00000411973 SUMO1P63165 101 aaKnown RBP11.16□□□□□ -0.62
TRAPPC12-203ENST00000411973 C20orf144Q9BQM9 153 aa11.16□□□□□ -0.62
TRAPPC12-203ENST00000411973 ARL2-SNX15V9GYD0 113 aa11.16□□□□□ -0.62
TRAPPC12-203ENST00000411973 TRAV1-1A0A0B4J248 108 aa11.15□□□□□ -0.62
TRAPPC12-203ENST00000411973 IGHV4-28A0A0C4DH34 117 aa11.15□□□□□ -0.62
TRAPPC12-203ENST00000411973 FAM74A7A6NL05 159 aa11.15□□□□□ -0.62
TRAPPC12-203ENST00000411973 KLLNB2CW77 178 aa11.15□□□□□ -0.62
TRAPPC12-203ENST00000411973 KIR3DS1Q14943 382 aa11.15□□□□□ -0.62
TRAPPC12-203ENST00000411973 TMEM256Q8N2U0 113 aa11.15□□□□□ -0.62
TRAPPC12-203ENST00000411973 EPDR1Q9UM22 224 aa11.15□□□□□ -0.62
TRAPPC12-203ENST00000411973 YTHDF2Q9Y5A9 579 aaKnown RBP11.15□□□□□ -0.62
TRAPPC12-203ENST00000411973 LENEPQ9Y5L5 61 aa11.15□□□□□ -0.62
TRAPPC12-203ENST00000411973 TCRAP04437 139 aa11.14□□□□□ -0.63
TRAPPC12-203ENST00000411973 RBMY1A1P0DJD3 496 aaKnown RBP11.14□□□□□ -0.63
TRAPPC12-203ENST00000411973 RBMY1CP0DJD4 496 aa11.14□□□□□ -0.63
TRAPPC12-203ENST00000411973 GNG5P63218 68 aa11.14□□□□□ -0.63
TRAPPC12-203ENST00000411973 RBMY1FQ15415 496 aaKnown RBP11.14□□□□□ -0.63
TRAPPC12-203ENST00000411973 GFI1BQ5VTD9 330 aa11.14□□□□□ -0.63
TRAPPC12-203ENST00000411973 GOLT1AQ6ZVE7 132 aa11.14□□□□□ -0.63
TRAPPC12-203ENST00000411973 RPH3ALQ9UNE2 315 aa11.14□□□□□ -0.63
TRAPPC12-203ENST00000411973 BOLA1Q9Y3E2 137 aa11.14□□□□□ -0.63
TRAPPC12-203ENST00000411973 IGHV3OR16-12A0A075B7B8 117 aa11.13□□□□□ -0.63
TRAPPC12-203ENST00000411973 UBE2G2P60604 165 aa11.13□□□□□ -0.63
TRAPPC12-203ENST00000411973 ZFAND2AQ8N6M9 145 aa11.13□□□□□ -0.63
TRAPPC12-203ENST00000411973 Q8TAT8 98 aa11.13□□□□□ -0.63
TRAPPC12-203ENST00000411973 TMEM208Q9BTX3 173 aa11.13□□□□□ -0.63
TRAPPC12-203ENST00000411973 H7BYZ3 331 aa11.12□□□□□ -0.63
TRAPPC12-203ENST00000411973 K7EQM0 130 aa11.12□□□□□ -0.63
TRAPPC12-203ENST00000411973 HBE1P02100 147 aa11.12□□□□□ -0.63
TRAPPC12-203ENST00000411973 PPT1P50897 306 aa11.12□□□□□ -0.63
TRAPPC12-203ENST00000411973 CCDC28AQ8IWP9 274 aa11.12□□□□□ -0.63
TRAPPC12-203ENST00000411973 CYB561D1Q8N8Q1 229 aa11.12□□□□□ -0.63
TRAPPC12-203ENST00000411973 MUC7Q8TAX7 377 aa11.12□□□□□ -0.63
TRAPPC12-203ENST00000411973 TCEAL7Q9BRU2 100 aa11.12□□□□□ -0.63
TRAPPC12-203ENST00000411973 ATG101Q9BSB4 218 aa11.12□□□□□ -0.63
TRAPPC12-203ENST00000411973 A0A1B0GV50 99 aa11.11□□□□□ -0.63
TRAPPC12-203ENST00000411973 C7orf71A4D174 169 aa11.11□□□□□ -0.63
TRAPPC12-203ENST00000411973 TMEM189A5PLL7 270 aa11.11□□□□□ -0.63
TRAPPC12-203ENST00000411973 FBLL1A6NHQ2 334 aaKnown RBP11.11□□□□□ -0.63
TRAPPC12-203ENST00000411973 TEX46H3BTG2 121 aa11.11□□□□□ -0.63
TRAPPC12-203ENST00000411973 DEFB4AO15263 64 aa11.11□□□□□ -0.63
TRAPPC12-203ENST00000411973 ZNF324O75467 553 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC12-203ENST00000411973 IFNA7P01567 189 aa11.11□□□□□ -0.63
TRAPPC12-203ENST00000411973 GPX1P07203 203 aa11.11□□□□□ -0.63
TRAPPC12-203ENST00000411973 TAS2R60P59551 318 aa11.11□□□□□ -0.63
TRAPPC12-203ENST00000411973 RRN3P1Q2M238 152 aa11.11□□□□□ -0.63
TRAPPC12-203ENST00000411973 ALKAL2Q6UX46 152 aa11.11□□□□□ -0.63
TRAPPC12-203ENST00000411973 IL17DQ8TAD2 202 aa11.11□□□□□ -0.63
TRAPPC12-203ENST00000411973 HIST1H2BAQ96A08 127 aa11.11□□□□□ -0.63
TRAPPC12-203ENST00000411973 LINC01587Q99440 93 aa11.11□□□□□ -0.63
TRAPPC12-203ENST00000411973 TRAV8-1A0A0A6YYK1 113 aa11.1□□□□□ -0.63
TRAPPC12-203ENST00000411973 TRAV12-3A0A0B4J271 114 aa11.1□□□□□ -0.63
TRAPPC12-203ENST00000411973 J3KRW8 73 aa11.1□□□□□ -0.63
TRAPPC12-203ENST00000411973 PAGE4O60829 102 aa11.1□□□□□ -0.63
TRAPPC12-203ENST00000411973 IGLV2-11P01706 119 aa11.1□□□□□ -0.63
TRAPPC12-203ENST00000411973 CCL20P78556 96 aa11.1□□□□□ -0.63
TRAPPC12-203ENST00000411973 CST9LP1Q5W188 147 aa11.1□□□□□ -0.63
TRAPPC12-203ENST00000411973 TMEM75Q8N9X5 138 aa11.1□□□□□ -0.63
TRAPPC12-203ENST00000411973 NIPSNAP3BQ9BS92 247 aa11.1□□□□□ -0.63
TRAPPC12-203ENST00000411973 CSMD3Q7Z407 3707 aa11.09□□□□□ -0.63
TRAPPC12-203ENST00000411973 LOC102723971A0A1B0GUV8 181 aa11.09□□□□□ -0.63
TRAPPC12-203ENST00000411973 ZNF705GA8MUZ8 300 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC12-203ENST00000411973 C3orf84H3BNL1 204 aa11.09□□□□□ -0.63
TRAPPC12-203ENST00000411973 PEX7O00628 323 aa11.09□□□□□ -0.63
TRAPPC12-203ENST00000411973 RNASE4P34096 147 aaKnown RBP11.09□□□□□ -0.63
TRAPPC12-203ENST00000411973 BTN1A1Q13410 526 aa11.09□□□□□ -0.63
TRAPPC12-203ENST00000411973 PMS2P11Q13670 270 aa11.09□□□□□ -0.63
TRAPPC12-203ENST00000411973 PRR9Q5T870 116 aa11.09□□□□□ -0.63
TRAPPC12-203ENST00000411973 PYGO2Q9BRQ0 406 aa11.09□□□□□ -0.63
TRAPPC12-203ENST00000411973 ATP5G3P48201 142 aa11.08□□□□□ -0.64
TRAPPC12-203ENST00000411973 ZNF493Q6ZR52 646 aa11.08□□□□□ -0.64
TRAPPC12-203ENST00000411973 C11orf45Q8TAV5 145 aa11.08□□□□□ -0.64
TRAPPC12-203ENST00000411973 TVP23CQ96ET8 276 aa11.08□□□□□ -0.64
TRAPPC12-203ENST00000411973 LINC00467Q9BRT7 94 aa11.08□□□□□ -0.64
TRAPPC12-203ENST00000411973 MANBALQ9NQG1 85 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms