RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 RGPD2P0DJD1 1756 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 PAX9P55771 341 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 HGFACQ04756 655 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 RFLNBQ8N5W9 214 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 PIFOQ8TCI5 191 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 PRORYQ9H606 182 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 TMEFF2Q9UIK5 374 aaPredicted RBP3.66□□□□□ -1.82
PTPN13-202ENST00000411767 PYGO1Q9Y3Y4 419 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 A0A1B0GXF2 115 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 PLAC8L1A1L4L8 177 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 IGKV1-39P01597 117 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 IGKV1D-39P04432 117 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 CXCL1P09341 107 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 FAM181AQ8N9Y4 354 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 IGLV3-22A0A075B6J6 115 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 IGKV2D-26A0A0A0MRZ7 120 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 IGLC7A0M8Q6 106 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 MIFP14174 115 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 FOXQ1Q9C009 403 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 HEATR1Q9H583 2144 aaKnown RBP3.66□□□□□ -1.82
PTPN13-202ENST00000411767 A0A0J9YWU9 116 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 hDV103S1A0JD37 113 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 KIAA0087Q14695 138 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 C16orf74Q96GX8 76 aa3.66□□□□□ -1.82
PTPN13-202ENST00000411767 SPART-AS1P0CW21 52 aa3.65□□□□□ -1.82
PTPN13-202ENST00000411767 GYPEP15421 78 aa3.65□□□□□ -1.82
PTPN13-202ENST00000411767 C1orf100Q5SVJ3 147 aa3.65□□□□□ -1.82
PTPN13-202ENST00000411767 C5orf66Q9H5L9 145 aa3.65□□□□□ -1.82
PTPN13-202ENST00000411767 FGF22Q9HCT0 170 aa3.65□□□□□ -1.82
PTPN13-202ENST00000411767 DHRS4-AS1Q9P1J3 65 aa3.65□□□□□ -1.82
PTPN13-202ENST00000411767 MDFICQ9P1T7 246 aa3.65□□□□□ -1.82
PTPN13-202ENST00000411767 COL1A1P02452 1464 aaPredicted RBP3.65□□□□□ -1.82
PTPN13-202ENST00000411767 ARID1BQ8NFD5 2236 aaPredicted RBP3.65□□□□□ -1.82
PTPN13-202ENST00000411767 IGKV1-9A0A0C4DH69 117 aa3.65□□□□□ -1.82
PTPN13-202ENST00000411767 CCL25O15444 150 aa3.65□□□□□ -1.82
PTPN13-202ENST00000411767 ATP1A1-AS1Q5TC04 95 aa3.65□□□□□ -1.82
PTPN13-202ENST00000411767 PMS2P5A8MQ11 134 aa3.65□□□□□ -1.83
PTPN13-202ENST00000411767 B4DSR2 109 aa3.65□□□□□ -1.83
PTPN13-202ENST00000411767 K7ERJ3 54 aa3.65□□□□□ -1.83
PTPN13-202ENST00000411767 GREM1O60565 184 aa3.65□□□□□ -1.83
PTPN13-202ENST00000411767 PIK3CD-AS1Q5SR53 167 aa3.65□□□□□ -1.83
PTPN13-202ENST00000411767 UFSP1Q6NVU6 142 aa3.65□□□□□ -1.83
PTPN13-202ENST00000411767 Q6ZT83 130 aa3.65□□□□□ -1.83
PTPN13-202ENST00000411767 SBSPONQ8IVN8 264 aa3.65□□□□□ -1.83
PTPN13-202ENST00000411767 RHPN1-AS1Q9BWJ2 59 aa3.65□□□□□ -1.83
PTPN13-202ENST00000411767 SCN11AQ9UI33 1791 aa3.65□□□□□ -1.83
PTPN13-202ENST00000411767 FSHBP01225 129 aa3.65□□□□□ -1.83
PTPN13-202ENST00000411767 IGKV1D-16P01601 117 aa3.65□□□□□ -1.83
PTPN13-202ENST00000411767 IGKV1-16P04430 117 aa3.65□□□□□ -1.83
PTPN13-202ENST00000411767 IGHV4-30-4P0DP06 118 aa3.65□□□□□ -1.83
PTPN13-202ENST00000411767 IGHV4-31P0DP07 118 aa3.65□□□□□ -1.83
PTPN13-202ENST00000411767 C5orf38Q86SI9 138 aa3.65□□□□□ -1.83
PTPN13-202ENST00000411767 HEATR5BQ9P2D3 2071 aa3.65□□□□□ -1.83
PTPN13-202ENST00000411767 A0A1B0GU69 56 aa3.65□□□□□ -1.83
PTPN13-202ENST00000411767 IGHV3-30P01768 117 aa3.65□□□□□ -1.83
PTPN13-202ENST00000411767 IGHV3-30-5P0DP03 117 aa3.65□□□□□ -1.83
PTPN13-202ENST00000411767 IGLL1P15814 213 aa3.65□□□□□ -1.83
PTPN13-202ENST00000411767 DEFB131AP59861 70 aa3.65□□□□□ -1.83
PTPN13-202ENST00000411767 LOXL1Q08397 574 aaPredicted RBP3.65□□□□□ -1.83
PTPN13-202ENST00000411767 LILRA6Q6PI73 481 aa3.65□□□□□ -1.83
PTPN13-202ENST00000411767 LINC00311Q8N616 119 aa3.65□□□□□ -1.83
PTPN13-202ENST00000411767 COL18A1P39060 1754 aa3.65□□□□□ -1.83
PTPN13-202ENST00000411767 LOC105371267A0A1B0GV96 52 aa3.65□□□□□ -1.83
PTPN13-202ENST00000411767 RNASE13Q5GAN3 156 aaKnown RBP3.65□□□□□ -1.83
PTPN13-202ENST00000411767 CDPF1Q6NVV7 123 aa3.65□□□□□ -1.83
PTPN13-202ENST00000411767 C1orf158Q8N1D5 194 aa3.65□□□□□ -1.83
PTPN13-202ENST00000411767 RPP25LQ8N5L8 163 aaKnown RBP3.65□□□□□ -1.83
PTPN13-202ENST00000411767 LEAP2Q969E1 77 aa3.65□□□□□ -1.83
PTPN13-202ENST00000411767 RGPD5Q99666 1765 aa3.64□□□□□ -1.83
PTPN13-202ENST00000411767 NUPR2A6NF83 97 aa3.64□□□□□ -1.83
PTPN13-202ENST00000411767 MT-ATP8P03928 68 aa3.64□□□□□ -1.83
PTPN13-202ENST00000411767 ENHOQ6UWT2 76 aa3.64□□□□□ -1.83
PTPN13-202ENST00000411767 LINC00269Q8N2A0 174 aa3.64□□□□□ -1.83
PTPN13-202ENST00000411767 C18orf32Q8TCD1 76 aa3.64□□□□□ -1.83
PTPN13-202ENST00000411767 TOMM6Q96B49 74 aa3.64□□□□□ -1.83
PTPN13-202ENST00000411767 HIGD2AQ9BW72 106 aa3.64□□□□□ -1.83
PTPN13-202ENST00000411767 CTSZQ9UBR2 303 aa3.64□□□□□ -1.83
PTPN13-202ENST00000411767 FER1L6Q2WGJ9 1857 aa3.64□□□□□ -1.83
PTPN13-202ENST00000411767 A0A0A0MQY5 61 aa3.64□□□□□ -1.83
PTPN13-202ENST00000411767 F8W735 103 aaPredicted RBP3.64□□□□□ -1.83
PTPN13-202ENST00000411767 SPRY2O43597 315 aa3.64□□□□□ -1.83
PTPN13-202ENST00000411767 TMEM200BQ69YZ2 307 aa3.64□□□□□ -1.83
PTPN13-202ENST00000411767 CLPSL2Q6UWE3 100 aa3.64□□□□□ -1.83
PTPN13-202ENST00000411767 FAM19A1Q7Z5A9 133 aa3.64□□□□□ -1.83
PTPN13-202ENST00000411767 TMEM263Q8WUH6 116 aaKnown RBP3.64□□□□□ -1.83
PTPN13-202ENST00000411767 PRRC2BQ5JSZ5 2229 aaKnown RBP3.64□□□□□ -1.83
PTPN13-202ENST00000411767 CECR9P0C854 216 aa3.64□□□□□ -1.83
PTPN13-202ENST00000411767 CCL14Q16627 93 aa3.64□□□□□ -1.83
PTPN13-202ENST00000411767 MYH2Q9UKX2 1941 aa3.64□□□□□ -1.83
PTPN13-202ENST00000411767 K7EQD1 137 aa3.64□□□□□ -1.83
PTPN13-202ENST00000411767 PRM2P04554 102 aa3.64□□□□□ -1.83
PTPN13-202ENST00000411767 LINC01356Q8N9X3 169 aa3.64□□□□□ -1.83
PTPN13-202ENST00000411767 C11orf52Q96A22 123 aa3.64□□□□□ -1.83
PTPN13-202ENST00000411767 PARP4Q9UKK3 1724 aaKnown RBP3.64□□□□□ -1.83
PTPN13-202ENST00000411767 RNF144BQ7Z419 303 aa3.64□□□□□ -1.83
PTPN13-202ENST00000411767 NFE4Q86UQ8 179 aa3.64□□□□□ -1.83
PTPN13-202ENST00000411767 XCL2Q9UBD3 114 aa3.64□□□□□ -1.83
PTPN13-202ENST00000411767 MYH15Q9Y2K3 1946 aa3.64□□□□□ -1.83
PTPN13-202ENST00000411767 XIRP1Q702N8 1843 aaKnown RBP3.64□□□□□ -1.83
PTPN13-202ENST00000411767 IGHV3OR16-8A0A075B7F1 116 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms