RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 LOC389332A0A1B0GUA5 103 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 UBE2L5PA0A1B0GUS4 154 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 hADV38S2A0JD32 116 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 TMEM213A2RRL7 107 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 MAP1LC3B2A6NCE7 125 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 CLDN34H7C241 214 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 NDUFA2O43678 99 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 NDUFS6O75380 124 aaKnown RBP2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 IFNA17P01571 189 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 IGKV1D-33P01593 117 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 IGKV1-33P01594 117 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 IGHV3-7P01780 117 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 GYPAP02724 150 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 FBP1P09467 338 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 BCL2P10415 239 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 FGF7P21781 194 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 PRTN3P24158 256 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 RAB13P51153 203 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 CCL8P80075 99 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 MEF2CQ06413 473 aaPredicted RBP2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 BSPH1Q075Z2 132 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 AKIRIN2Q53H80 203 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 LCN15Q6UWW0 184 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 TCF23Q7RTU1 214 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 NEGR1Q7Z3B1 354 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 SLC35E3Q7Z769 313 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 FAM216BQ8N7L0 139 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 DEFB108BQ8NET1 73 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 YPEL4Q96NS1 127 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 ZNF251Q9BRH9 671 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 GGACTQ9BVM4 153 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 NPCDR1Q9BY65 106 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 MAP1LC3BQ9GZQ8 125 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 BIN3Q9NQY0 253 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 GNG13Q9P2W3 67 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 RPUSD1Q9UJJ7 312 aaKnown RBP2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 LINC00312Q9Y6C7 94 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 S4R3C0 116 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 TRAV3A0A0B4J244 114 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 CTXND1A0A1B0GTU2 59 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 ZNF727A8MUV8 499 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 C1orf196B1AJZ1 125 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 B4DEV8 164 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 C17orf112F2Z3M2 114 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 CYB5BO43169 146 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 HRASP01112 189 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 IFNA1P01562 189 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 IFNA10P01566 189 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 SAA2P0DJI9 122 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 AZU1P20160 251 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 CEBPGP53567 150 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 RAB5BP61020 215 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 HSPE1P61604 102 aaKnown RBP2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 TFF3Q07654 80 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 RAB31Q13636 194 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 ACOT6Q3I5F7 207 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 SPINK9Q5DT21 86 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 NCMAPQ5T1S8 102 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 FAM104BQ5XKR9 115 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 HEPN1Q6WQI6 88 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 FAM24BQ8N5W8 94 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 ZNF709Q8N972 641 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 RNASE6Q93091 150 aaKnown RBP2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 LEAP2Q969E1 77 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 MALSU1Q96EH3 234 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 TVP23CQ96ET8 276 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 TMEM14BQ9NUH8 114 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 TMEM106BQ9NUM4 274 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 KAAG1Q9UBP8 84 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 PRNDQ9UKY0 176 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 PRELID1Q9Y255 219 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 WDR87Q6ZQQ6 2873 aa2.85□□□□□ -1.95
HMGB3P18-201ENST00000406327 DOCK10Q96BY6 2186 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 PGPA6NDG6 321 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 E7EQL1 145 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 TMEM250H0YL14 139 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 NDUFB3O43676 98 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 COX7A2P2O60397 106 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 FSTL3O95633 263 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 IFNA4P05014 189 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 SCGB1C2P0DMR2 95 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 CCL3L1P16619 93 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 PSMB3P49720 205 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 GNG10P50151 68 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 CMC4P56277 68 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 MEF2BQ02080 365 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 RTL8BQ17RB0 113 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 TMEM241Q24JQ0 296 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 ZNF833PQ6ZTB9 187 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 IQCF2Q8IXL9 164 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 ZFP82Q8N141 532 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 LINC00311Q8N616 119 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 LINC00337Q8N6G1 96 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 ST20-AS1Q8NBB2 130 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 OR13D1Q8NGV5 346 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 CCL17Q92583 94 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 MRAP2Q96G30 205 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 ZNF714Q96N38 554 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 NPVFQ9HCQ7 196 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 ENY2Q9NPA8 101 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms