RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 NPFFR1Q9GZQ6 430 aa10.78□□□□□ -0.68
COL6A2-203ENST00000397763 K7EQM0 130 aa10.78□□□□□ -0.68
COL6A2-203ENST00000397763 CKS2P33552 79 aa10.78□□□□□ -0.68
COL6A2-203ENST00000397763 SAMD5Q5TGI4 173 aa10.78□□□□□ -0.68
COL6A2-203ENST00000397763 CLUHP3Q96NS8 147 aa10.78□□□□□ -0.68
COL6A2-203ENST00000397763 H3BRN7 92 aa10.77□□□□□ -0.69
COL6A2-203ENST00000397763 EGR2P11161 476 aaPredicted RBP10.77□□□□□ -0.69
COL6A2-203ENST00000397763 C3orf36Q3SXR2 165 aa10.77□□□□□ -0.69
COL6A2-203ENST00000397763 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.77□□□□□ -0.69
COL6A2-203ENST00000397763 ORM1P02763 201 aa10.77□□□□□ -0.69
COL6A2-203ENST00000397763 FXYD2P54710 66 aa10.77□□□□□ -0.69
COL6A2-203ENST00000397763 ERCC8Q13216 396 aa10.77□□□□□ -0.69
COL6A2-203ENST00000397763 BOD1L2Q8IYS8 172 aa10.77□□□□□ -0.69
COL6A2-203ENST00000397763 IFI27L1Q96BM0 104 aa10.77□□□□□ -0.69
COL6A2-203ENST00000397763 NHP2Q9NX24 153 aaKnown RBP10.77□□□□□ -0.69
COL6A2-203ENST00000397763 IGFL3Q6UXB1 125 aa10.76□□□□□ -0.69
COL6A2-203ENST00000397763 FCER1GP30273 86 aa10.76□□□□□ -0.69
COL6A2-203ENST00000397763 ASCL5Q7RTU5 278 aa10.76□□□□□ -0.69
COL6A2-203ENST00000397763 AAMDCQ9H7C9 122 aa10.76□□□□□ -0.69
COL6A2-203ENST00000397763 TMEM14CQ9P0S9 112 aa10.76□□□□□ -0.69
COL6A2-203ENST00000397763 SPRY2O43597 315 aa10.75□□□□□ -0.69
COL6A2-203ENST00000397763 FAM90A27PA6NNH2 459 aa10.75□□□□□ -0.69
COL6A2-203ENST00000397763 HBDP02042 147 aa10.75□□□□□ -0.69
COL6A2-203ENST00000397763 PRSS1P07477 247 aa10.75□□□□□ -0.69
COL6A2-203ENST00000397763 AZU1P20160 251 aa10.75□□□□□ -0.69
COL6A2-203ENST00000397763 NDPQ00604 133 aa10.75□□□□□ -0.69
COL6A2-203ENST00000397763 FAM104BQ5XKR9 115 aa10.75□□□□□ -0.69
COL6A2-203ENST00000397763 ORMDL3Q8N138 153 aa10.75□□□□□ -0.69
COL6A2-203ENST00000397763 RNF182Q8N6D2 247 aa10.75□□□□□ -0.69
COL6A2-203ENST00000397763 HOXB4P17483 251 aaPredicted RBP10.75□□□□□ -0.69
COL6A2-203ENST00000397763 APOBEC3AP31941 199 aaPredicted RBP10.75□□□□□ -0.69
COL6A2-203ENST00000397763 PVRIGQ6DKI7 326 aa10.75□□□□□ -0.69
COL6A2-203ENST00000397763 ADAMTSL5Q6ZMM2 481 aa10.75□□□□□ -0.69
COL6A2-203ENST00000397763 IGKV2D-26A0A0A0MRZ7 120 aa10.74□□□□□ -0.69
COL6A2-203ENST00000397763 VSTM5A8MXK1 200 aa10.74□□□□□ -0.69
COL6A2-203ENST00000397763 SMIM13P0DJ93 91 aa10.74□□□□□ -0.69
COL6A2-203ENST00000397763 Q6ZQT7 251 aa10.74□□□□□ -0.69
COL6A2-203ENST00000397763 LCNL1Q6ZST4 164 aa10.74□□□□□ -0.69
COL6A2-203ENST00000397763 GTSCR1Q86UQ5 136 aa10.74□□□□□ -0.69
COL6A2-203ENST00000397763 MRPS12O15235 138 aaKnown RBP10.73□□□□□ -0.69
COL6A2-203ENST00000397763 AMTNQ6UX39 209 aa10.73□□□□□ -0.69
COL6A2-203ENST00000397763 NEGR1Q7Z3B1 354 aa10.73□□□□□ -0.69
COL6A2-203ENST00000397763 KAAG1Q9UBP8 84 aa10.73□□□□□ -0.69
COL6A2-203ENST00000397763 PRAC2D3DTV9 90 aa10.73□□□□□ -0.69
COL6A2-203ENST00000397763 C8orf31Q8N9H6 132 aa10.73□□□□□ -0.69
COL6A2-203ENST00000397763 WFDC12Q8WWY7 111 aa10.73□□□□□ -0.69
COL6A2-203ENST00000397763 TSSC4Q9Y5U2 329 aaPredicted RBP10.73□□□□□ -0.69
COL6A2-203ENST00000397763 J3KRW8 73 aa10.73□□□□□ -0.69
COL6A2-203ENST00000397763 DYNAPQ8N1N2 210 aa10.73□□□□□ -0.69
COL6A2-203ENST00000397763 OR9G4Q8NGQ1 327 aa10.73□□□□□ -0.69
COL6A2-203ENST00000397763 NBR2O15453 112 aa10.72□□□□□ -0.69
COL6A2-203ENST00000397763 NDUFS7O75251 213 aa10.72□□□□□ -0.69
COL6A2-203ENST00000397763 LGALS9BQ3B8N2 356 aa10.72□□□□□ -0.69
COL6A2-203ENST00000397763 LGALS9CQ6DKI2 356 aa10.72□□□□□ -0.69
COL6A2-203ENST00000397763 Q8NA96 180 aa10.72□□□□□ -0.69
COL6A2-203ENST00000397763 DEFB104AQ8WTQ1 72 aa10.72□□□□□ -0.69
COL6A2-203ENST00000397763 FANCD2OSQ96PS1 177 aa10.72□□□□□ -0.69
COL6A2-203ENST00000397763 COL25A1Q9BXS0 654 aaPredicted RBP10.72□□□□□ -0.69
COL6A2-203ENST00000397763 BMI1P35226 326 aa10.72□□□□□ -0.69
COL6A2-203ENST00000397763 SH2D6Q7Z4S9 175 aa10.72□□□□□ -0.69
COL6A2-203ENST00000397763 OR4X2Q8NGF9 303 aa10.72□□□□□ -0.69
COL6A2-203ENST00000397763 OR5A1Q8NGJ0 315 aa10.72□□□□□ -0.69
COL6A2-203ENST00000397763 PRR25Q96S07 402 aa10.72□□□□□ -0.69
COL6A2-203ENST00000397763 VPS13CQ709C8 3753 aa10.72□□□□□ -0.69
COL6A2-203ENST00000397763 WFDC2Q14508 124 aa10.71□□□□□ -0.69
COL6A2-203ENST00000397763 SPG11Q96JI7 2443 aa10.71□□□□□ -0.69
COL6A2-203ENST00000397763 TRAV26-2A0A0B4J265 109 aa10.71□□□□□ -0.69
COL6A2-203ENST00000397763 LEPP41159 167 aa10.71□□□□□ -0.69
COL6A2-203ENST00000397763 F8W735 103 aaPredicted RBP10.71□□□□□ -0.7
COL6A2-203ENST00000397763 CD3EP07766 207 aa10.71□□□□□ -0.7
COL6A2-203ENST00000397763 ZNF672Q499Z4 452 aaPredicted RBP10.71□□□□□ -0.7
COL6A2-203ENST00000397763 CHAC1Q9BUX1 264 aa10.71□□□□□ -0.7
COL6A2-203ENST00000397763 TMEM160Q9NX00 188 aa10.71□□□□□ -0.7
COL6A2-203ENST00000397763 ETDBQ3ZM63 59 aa10.7□□□□□ -0.7
COL6A2-203ENST00000397763 SFTA2Q6UW10 78 aa10.7□□□□□ -0.7
COL6A2-203ENST00000397763 ARPC1AQ92747 370 aa10.7□□□□□ -0.7
COL6A2-203ENST00000397763 FOXC2Q99958 501 aa10.7□□□□□ -0.7
COL6A2-203ENST00000397763 H3BMG7 143 aa10.7□□□□□ -0.7
COL6A2-203ENST00000397763 C21orf62Q9NYP8 219 aa10.7□□□□□ -0.7
COL6A2-203ENST00000397763 SMAD5-AS1Q9Y6J3 95 aa10.7□□□□□ -0.7
COL6A2-203ENST00000397763 NCOR2Q9Y618 2525 aa10.69□□□□□ -0.7
COL6A2-203ENST00000397763 DPM3Q9P2X0 92 aa10.69□□□□□ -0.7
COL6A2-203ENST00000397763 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.69□□□□□ -0.7
COL6A2-203ENST00000397763 MFAP4P55083 255 aa10.69□□□□□ -0.7
COL6A2-203ENST00000397763 SIGMAR1Q99720 223 aa10.69□□□□□ -0.7
COL6A2-203ENST00000397763 AGRNO00468 2067 aa10.69□□□□□ -0.7
COL6A2-203ENST00000397763 WI2-2373I1.2A0A1W2PRP0 233 aa10.69□□□□□ -0.7
COL6A2-203ENST00000397763 A6NJY4 79 aa10.69□□□□□ -0.7
COL6A2-203ENST00000397763 CDSNQ15517 529 aa10.69□□□□□ -0.7
COL6A2-203ENST00000397763 ECSCRQ19T08 205 aa10.69□□□□□ -0.7
COL6A2-203ENST00000397763 ZC2HC1BQ5TFG8 222 aa10.69□□□□□ -0.7
COL6A2-203ENST00000397763 CHD8Q9HCK8 2581 aa10.68□□□□□ -0.7
COL6A2-203ENST00000397763 LY6LH3BQJ8 138 aa10.68□□□□□ -0.7
COL6A2-203ENST00000397763 IGHG4P01861 327 aa10.68□□□□□ -0.7
COL6A2-203ENST00000397763 IL17RELQ6ZVW7 336 aa10.68□□□□□ -0.7
COL6A2-203ENST00000397763 C5orf64Q2M2E5 130 aa10.68□□□□□ -0.7
COL6A2-203ENST00000397763 ZNF493Q6ZR52 646 aa10.68□□□□□ -0.7
COL6A2-203ENST00000397763 ZNF575Q86XF7 245 aa10.68□□□□□ -0.7
COL6A2-203ENST00000397763 TRGV3P03979 118 aa10.67□□□□□ -0.7
COL6A2-203ENST00000397763 TNFRSF14Q92956 283 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms