RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 F6UB75 175 aa20.52■□□□□ 0.88
CPNE1-203ENST00000397442 ZNF705DP0CH99 300 aaPredicted RBP20.52■□□□□ 0.88
CPNE1-203ENST00000397442 ZNF705BP0CI00 300 aaPredicted RBP20.52■□□□□ 0.88
CPNE1-203ENST00000397442 AGPAT4-IT1Q9H0P7 198 aa20.52■□□□□ 0.88
CPNE1-203ENST00000397442 C9orf47Q6ZRZ4 202 aa20.51■□□□□ 0.87
CPNE1-203ENST00000397442 WFDC9Q8NEX5 89 aa20.51■□□□□ 0.87
CPNE1-203ENST00000397442 OR2K2Q8NGT1 345 aa20.51■□□□□ 0.87
CPNE1-203ENST00000397442 FBLL1A6NHQ2 334 aaKnown RBP20.51■□□□□ 0.87
CPNE1-203ENST00000397442 Q8TAT8 98 aa20.51■□□□□ 0.87
CPNE1-203ENST00000397442 C7orf77A4D0Y5 90 aa20.5■□□□□ 0.87
CPNE1-203ENST00000397442 OR4C46A6NHA9 309 aa20.5■□□□□ 0.87
CPNE1-203ENST00000397442 LURAP1LQ8IV03 231 aa20.5■□□□□ 0.87
CPNE1-203ENST00000397442 OR8A1Q8NGG7 326 aa20.5■□□□□ 0.87
CPNE1-203ENST00000397442 ISOC2Q96AB3 205 aa20.5■□□□□ 0.87
CPNE1-203ENST00000397442 SMIM12Q96EX1 92 aa20.5■□□□□ 0.87
CPNE1-203ENST00000397442 TRRAPQ9Y4A5 3859 aa20.5■□□□□ 0.87
CPNE1-203ENST00000397442 NPIPB6E9PJ23 425 aa20.49■□□□□ 0.87
CPNE1-203ENST00000397442 TMEM183AQ8IXX5 376 aa20.49■□□□□ 0.87
CPNE1-203ENST00000397442 ZFP30Q9Y2G7 519 aa20.49■□□□□ 0.87
CPNE1-203ENST00000397442 OR5I1Q13606 314 aa20.48■□□□□ 0.87
CPNE1-203ENST00000397442 GDF5OSQ5U4N7 250 aa20.48■□□□□ 0.87
CPNE1-203ENST00000397442 GPR61Q9BZJ8 451 aa20.48■□□□□ 0.87
CPNE1-203ENST00000397442 SCO1O75880 301 aa20.48■□□□□ 0.87
CPNE1-203ENST00000397442 GCGP01275 180 aa20.48■□□□□ 0.87
CPNE1-203ENST00000397442 RHEBQ15382 184 aa20.48■□□□□ 0.87
CPNE1-203ENST00000397442 PRR25Q96S07 402 aa20.48■□□□□ 0.87
CPNE1-203ENST00000397442 B4DEV8 164 aa20.47■□□□□ 0.87
CPNE1-203ENST00000397442 CD33P20138 364 aa20.47■□□□□ 0.87
CPNE1-203ENST00000397442 INSL3P51460 131 aa20.47■□□□□ 0.87
CPNE1-203ENST00000397442 OR10J6PQ8NGY7 276 aa20.47■□□□□ 0.87
CPNE1-203ENST00000397442 MAP6D1Q9H9H5 199 aa20.47■□□□□ 0.87
CPNE1-203ENST00000397442 PPP1R14DQ9NXH3 145 aa20.47■□□□□ 0.87
CPNE1-203ENST00000397442 MGST1P10620 155 aaKnown RBP20.46■□□□□ 0.87
CPNE1-203ENST00000397442 DEFB131AP59861 70 aa20.46■□□□□ 0.87
CPNE1-203ENST00000397442 HIST1H1AQ02539 215 aaPredicted RBP20.46■□□□□ 0.87
CPNE1-203ENST00000397442 TMEM78Q5T7P6 136 aa20.46■□□□□ 0.87
CPNE1-203ENST00000397442 C9orf66Q5T8R8 295 aa20.46■□□□□ 0.87
CPNE1-203ENST00000397442 C8orf49Q96NF6 230 aa20.46■□□□□ 0.87
CPNE1-203ENST00000397442 ZNF492Q9P255 531 aa20.46■□□□□ 0.87
CPNE1-203ENST00000397442 ZNF138P52744 262 aa20.45■□□□□ 0.86
CPNE1-203ENST00000397442 RPS10P5Q9NQ39 176 aa20.45■□□□□ 0.86
CPNE1-203ENST00000397442 A0A0J9YX75 114 aa20.45■□□□□ 0.86
CPNE1-203ENST00000397442 ODF3L2Q3SX64 289 aa20.45■□□□□ 0.86
CPNE1-203ENST00000397442 RNF212Q495C1 297 aa20.45■□□□□ 0.86
CPNE1-203ENST00000397442 COX8CQ7Z4L0 72 aa20.45■□□□□ 0.86
CPNE1-203ENST00000397442 LINC00477Q96M19 166 aa20.45■□□□□ 0.86
CPNE1-203ENST00000397442 CT45A10P0DMU9 189 aa20.44■□□□□ 0.86
CPNE1-203ENST00000397442 SAPCD1Q5SSQ6 148 aa20.44■□□□□ 0.86
CPNE1-203ENST00000397442 ZC2HC1AQ96GY0 325 aa20.44■□□□□ 0.86
CPNE1-203ENST00000397442 SAV1Q9H4B6 383 aaPredicted RBP20.44■□□□□ 0.86
CPNE1-203ENST00000397442 NOTCH3Q9UM47 2321 aa20.44■□□□□ 0.86
CPNE1-203ENST00000397442 BEAN1Q3B7T3 259 aa20.43■□□□□ 0.86
CPNE1-203ENST00000397442 LINC00322Q6ZN03 302 aaPredicted RBP20.43■□□□□ 0.86
CPNE1-203ENST00000397442 FOXI2Q6ZQN5 318 aa20.43■□□□□ 0.86
CPNE1-203ENST00000397442 SFRP2Q96HF1 295 aa20.43■□□□□ 0.86
CPNE1-203ENST00000397442 MDFIQ99750 246 aa20.43■□□□□ 0.86
CPNE1-203ENST00000397442 MCRIP2Q9BUT9 160 aaKnown RBP20.42■□□□□ 0.86
CPNE1-203ENST00000397442 AGRNO00468 2067 aa20.42■□□□□ 0.86
CPNE1-203ENST00000397442 A0A087WWC5 75 aa20.42■□□□□ 0.86
CPNE1-203ENST00000397442 ZNF124Q15973 351 aa20.42■□□□□ 0.86
CPNE1-203ENST00000397442 FAM19A4Q96LR4 140 aa20.42■□□□□ 0.86
CPNE1-203ENST00000397442 PRR27Q6MZM9 219 aa20.41■□□□□ 0.86
CPNE1-203ENST00000397442 RNASE7Q9H1E1 156 aaKnown RBP20.41■□□□□ 0.86
CPNE1-203ENST00000397442 CRIP1P50238 77 aa20.4■□□□□ 0.86
CPNE1-203ENST00000397442 EBLN2Q6P2I7 272 aa20.4■□□□□ 0.86
CPNE1-203ENST00000397442 NDFIP1Q9BT67 221 aa20.4■□□□□ 0.86
CPNE1-203ENST00000397442 LENEPQ9Y5L5 61 aa20.4■□□□□ 0.86
CPNE1-203ENST00000397442 KNCNA6PVL3 124 aa20.39■□□□□ 0.86
CPNE1-203ENST00000397442 MT-ND4LP03901 98 aa20.39■□□□□ 0.86
CPNE1-203ENST00000397442 IGLL1P15814 213 aa20.39■□□□□ 0.86
CPNE1-203ENST00000397442 APRG1Q8IVJ8 170 aa20.38■□□□□ 0.85
CPNE1-203ENST00000397442 C19orf71A6NCJ1 209 aa20.38■□□□□ 0.85
CPNE1-203ENST00000397442 WIPF1O43516 503 aa20.38■□□□□ 0.85
CPNE1-203ENST00000397442 ERVFC1-1P60608 527 aa20.38■□□□□ 0.85
CPNE1-203ENST00000397442 FAM231DQ6ZW35 169 aa20.38■□□□□ 0.85
CPNE1-203ENST00000397442 OSTCQ9NRP0 149 aa20.38■□□□□ 0.85
CPNE1-203ENST00000397442 CD7P09564 240 aa20.37■□□□□ 0.85
CPNE1-203ENST00000397442 ZNF80P51504 273 aaPredicted RBP20.37■□□□□ 0.85
CPNE1-203ENST00000397442 IBA57Q5T440 356 aaKnown RBP20.37■□□□□ 0.85
CPNE1-203ENST00000397442 ZFAND2AQ8N6M9 145 aa20.37■□□□□ 0.85
CPNE1-203ENST00000397442 OR10G8Q8NGN5 311 aa20.37■□□□□ 0.85
CPNE1-203ENST00000397442 ANAPC16Q96DE5 110 aa20.37■□□□□ 0.85
CPNE1-203ENST00000397442 BIN3Q9NQY0 253 aa20.37■□□□□ 0.85
CPNE1-203ENST00000397442 C19orf73Q9NVV2 129 aa20.37■□□□□ 0.85
CPNE1-203ENST00000397442 HLA-DRB4P13762 266 aa20.36■□□□□ 0.85
CPNE1-203ENST00000397442 ACTL10Q5JWF8 245 aa20.36■□□□□ 0.85
CPNE1-203ENST00000397442 TMEM88Q6PEY1 159 aa20.36■□□□□ 0.85
CPNE1-203ENST00000397442 NUDT10Q8NFP7 164 aa20.36■□□□□ 0.85
CPNE1-203ENST00000397442 NUDT11Q96G61 164 aa20.36■□□□□ 0.85
CPNE1-203ENST00000397442 FAM110AQ9BQ89 295 aa20.36■□□□□ 0.85
CPNE1-203ENST00000397442 CTDSP1Q9GZU7 261 aa20.36■□□□□ 0.85
CPNE1-203ENST00000397442 TMEM242Q9NWH2 141 aa20.36■□□□□ 0.85
CPNE1-203ENST00000397442 HLA-DRB4X5D2U9 266 aa20.36■□□□□ 0.85
CPNE1-203ENST00000397442 TRBV7-9A0A0J9YWB2 115 aa20.35■□□□□ 0.85
CPNE1-203ENST00000397442 OR11H12B2RN74 326 aa20.35■□□□□ 0.85
CPNE1-203ENST00000397442 H3BMM0 161 aa20.35■□□□□ 0.85
CPNE1-203ENST00000397442 DUSP14O95147 198 aaKnown RBP20.35■□□□□ 0.85
CPNE1-203ENST00000397442 SMUG1Q53HV7 270 aa20.35■□□□□ 0.85
CPNE1-203ENST00000397442 CBLN2Q8IUK8 224 aa20.35■□□□□ 0.85
CPNE1-203ENST00000397442 A8MTW9 85 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms