RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 ANXA7P20073 488 aaKnown RBP6.32□□□□□ -1.4
NEDD9-203ENST00000397378 EVI2AP22794 236 aa6.32□□□□□ -1.4
NEDD9-203ENST00000397378 LEPP41159 167 aa6.32□□□□□ -1.4
NEDD9-203ENST00000397378 IFITM2Q01629 132 aa6.32□□□□□ -1.4
NEDD9-203ENST00000397378 ODF1Q14990 250 aa6.32□□□□□ -1.4
NEDD9-203ENST00000397378 ZNF674Q2M3X9 581 aa6.32□□□□□ -1.4
NEDD9-203ENST00000397378 SPANXN5Q5MJ07 72 aa6.32□□□□□ -1.4
NEDD9-203ENST00000397378 PATE2Q6UY27 113 aa6.32□□□□□ -1.4
NEDD9-203ENST00000397378 LINC00299Q6ZSB3 139 aa6.32□□□□□ -1.4
NEDD9-203ENST00000397378 NEGR1Q7Z3B1 354 aa6.32□□□□□ -1.4
NEDD9-203ENST00000397378 LRTM2Q8N967 370 aa6.32□□□□□ -1.4
NEDD9-203ENST00000397378 ST6GAL2Q96JF0 529 aa6.32□□□□□ -1.4
NEDD9-203ENST00000397378 MIXL1Q9H2W2 232 aa6.32□□□□□ -1.4
NEDD9-203ENST00000397378 GSN-AS1Q9NRJ2 163 aa6.32□□□□□ -1.4
NEDD9-203ENST00000397378 STRAPQ9Y3F4 350 aaKnown RBP6.32□□□□□ -1.4
NEDD9-203ENST00000397378 RS1O15537 224 aa6.31□□□□□ -1.4
NEDD9-203ENST00000397378 SLC25A5P05141 298 aaKnown RBP6.31□□□□□ -1.4
NEDD9-203ENST00000397378 CT45A10P0DMU9 189 aa6.31□□□□□ -1.4
NEDD9-203ENST00000397378 S100PP25815 95 aa6.31□□□□□ -1.4
NEDD9-203ENST00000397378 NKX2-5P52952 324 aaPredicted RBP6.31□□□□□ -1.4
NEDD9-203ENST00000397378 CRYBA4P53673 196 aa6.31□□□□□ -1.4
NEDD9-203ENST00000397378 TCL1AP56279 114 aa6.31□□□□□ -1.4
NEDD9-203ENST00000397378 ANXA2RQ3ZCQ2 193 aa6.31□□□□□ -1.4
NEDD9-203ENST00000397378 PXDC1Q5TGL8 231 aa6.31□□□□□ -1.4
NEDD9-203ENST00000397378 TEPPQ6URK8 271 aa6.31□□□□□ -1.4
NEDD9-203ENST00000397378 C10orf126Q8N4M7 172 aa6.31□□□□□ -1.4
NEDD9-203ENST00000397378 ARL6Q9H0F7 186 aa6.31□□□□□ -1.4
NEDD9-203ENST00000397378 ARV1Q9H2C2 271 aa6.31□□□□□ -1.4
NEDD9-203ENST00000397378 PXMP4Q9Y6I8 212 aa6.31□□□□□ -1.4
NEDD9-203ENST00000397378 DNAH8Q96JB1 4490 aa6.31□□□□□ -1.4
NEDD9-203ENST00000397378 SMCO3A2RU48 225 aa6.3□□□□□ -1.4
NEDD9-203ENST00000397378 C7orf71A4D174 169 aa6.3□□□□□ -1.4
NEDD9-203ENST00000397378 RAB19A4D1S5 217 aa6.3□□□□□ -1.4
NEDD9-203ENST00000397378 FNDC10F2Z333 226 aa6.3□□□□□ -1.4
NEDD9-203ENST00000397378 H0Y8G0 127 aa6.3□□□□□ -1.4
NEDD9-203ENST00000397378 H3BP45 60 aa6.3□□□□□ -1.4
NEDD9-203ENST00000397378 SLC17A3O00476 420 aa6.3□□□□□ -1.4
NEDD9-203ENST00000397378 GAS8-AS1O95177 125 aa6.3□□□□□ -1.4
NEDD9-203ENST00000397378 KRTAP10-4P60372 401 aaPredicted RBP6.3□□□□□ -1.4
NEDD9-203ENST00000397378 TMEM128Q5BJH2 165 aa6.3□□□□□ -1.4
NEDD9-203ENST00000397378 IBA57Q5T440 356 aaKnown RBP6.3□□□□□ -1.4
NEDD9-203ENST00000397378 BPIFA4PQ86YQ2 179 aa6.3□□□□□ -1.4
NEDD9-203ENST00000397378 WFDC10BQ8IUB3 73 aa6.3□□□□□ -1.4
NEDD9-203ENST00000397378 EIF4E3Q8N5X7 224 aaKnown RBP6.3□□□□□ -1.4
NEDD9-203ENST00000397378 SAT2Q96F10 170 aaPredicted RBP6.3□□□□□ -1.4
NEDD9-203ENST00000397378 VGLL1Q99990 258 aa6.3□□□□□ -1.4
NEDD9-203ENST00000397378 HHLA3Q9XRX5 114 aa6.3□□□□□ -1.4
NEDD9-203ENST00000397378 KLF12Q9Y4X4 402 aa6.3□□□□□ -1.4
NEDD9-203ENST00000397378 KLLNB2CW77 178 aa6.29□□□□□ -1.4
NEDD9-203ENST00000397378 RGS5O15539 181 aa6.29□□□□□ -1.4
NEDD9-203ENST00000397378 PSCAO43653 123 aa6.29□□□□□ -1.4
NEDD9-203ENST00000397378 PRAF2O60831 178 aa6.29□□□□□ -1.4
NEDD9-203ENST00000397378 CRYGDP07320 174 aa6.29□□□□□ -1.4
NEDD9-203ENST00000397378 OR4E1P0C645 316 aa6.29□□□□□ -1.4
NEDD9-203ENST00000397378 FHL2Q14192 279 aa6.29□□□□□ -1.4
NEDD9-203ENST00000397378 CTF1Q16619 201 aa6.29□□□□□ -1.4
NEDD9-203ENST00000397378 Q6ZSA8 131 aa6.29□□□□□ -1.4
NEDD9-203ENST00000397378 LINC00305Q7Z4B0 112 aa6.29□□□□□ -1.4
NEDD9-203ENST00000397378 Q8N814 137 aa6.29□□□□□ -1.4
NEDD9-203ENST00000397378 C12orf57Q99622 126 aa6.29□□□□□ -1.4
NEDD9-203ENST00000397378 SEC22CQ9BRL7 303 aa6.29□□□□□ -1.4
NEDD9-203ENST00000397378 MRPL32Q9BYC8 188 aaKnown RBP6.29□□□□□ -1.4
NEDD9-203ENST00000397378 RBM38Q9H0Z9 239 aaKnown RBP6.29□□□□□ -1.4
NEDD9-203ENST00000397378 NPVFQ9HCQ7 196 aa6.29□□□□□ -1.4
NEDD9-203ENST00000397378 TREM1Q9NP99 234 aa6.29□□□□□ -1.4
NEDD9-203ENST00000397378 PKHD1L1Q86WI1 4243 aa6.29□□□□□ -1.4
NEDD9-203ENST00000397378 CTDSP2O14595 271 aa6.28□□□□□ -1.4
NEDD9-203ENST00000397378 IGHV3-53P01767 116 aa6.28□□□□□ -1.4
NEDD9-203ENST00000397378 SNRPCP09234 159 aaKnown RBP6.28□□□□□ -1.4
NEDD9-203ENST00000397378 STAG3L3P0CL85 134 aa6.28□□□□□ -1.4
NEDD9-203ENST00000397378 IGLC2P0DOY2 106 aa6.28□□□□□ -1.4
NEDD9-203ENST00000397378 SRIP30626 198 aa6.28□□□□□ -1.4
NEDD9-203ENST00000397378 ID3Q02535 119 aa6.28□□□□□ -1.4
NEDD9-203ENST00000397378 C8orf49Q96NF6 230 aa6.28□□□□□ -1.4
NEDD9-203ENST00000397378 MRPS26Q9BYN8 205 aaKnown RBP6.28□□□□□ -1.4
NEDD9-203ENST00000397378 NAA50Q9GZZ1 169 aaKnown RBP6.28□□□□□ -1.4
NEDD9-203ENST00000397378 MCUBQ9NWR8 336 aa6.28□□□□□ -1.4
NEDD9-203ENST00000397378 CCDC160A6NGH7 325 aa6.27□□□□□ -1.41
NEDD9-203ENST00000397378 H3BQ15 152 aa6.27□□□□□ -1.41
NEDD9-203ENST00000397378 H3BTX0 84 aa6.27□□□□□ -1.41
NEDD9-203ENST00000397378 K7EQD1 137 aa6.27□□□□□ -1.41
NEDD9-203ENST00000397378 GOSR2O14653 212 aa6.27□□□□□ -1.41
NEDD9-203ENST00000397378 ZNF253O75346 499 aa6.27□□□□□ -1.41
NEDD9-203ENST00000397378 MPDU1O75352 247 aa6.27□□□□□ -1.41
NEDD9-203ENST00000397378 SMIM6P0DI80 62 aa6.27□□□□□ -1.41
NEDD9-203ENST00000397378 MT1HL1P0DM35 61 aa6.27□□□□□ -1.41
NEDD9-203ENST00000397378 RRAS2P62070 204 aaPredicted RBP6.27□□□□□ -1.41
NEDD9-203ENST00000397378 CD300CQ08708 224 aa6.27□□□□□ -1.41
NEDD9-203ENST00000397378 SLC38A11Q08AI6 406 aa6.27□□□□□ -1.41
NEDD9-203ENST00000397378 IL18Q14116 193 aa6.27□□□□□ -1.41
NEDD9-203ENST00000397378 GUK1Q16774 197 aa6.27□□□□□ -1.41
NEDD9-203ENST00000397378 MORN5Q5VZ52 161 aa6.27□□□□□ -1.41
NEDD9-203ENST00000397378 SCXQ7RTU7 201 aa6.27□□□□□ -1.41
NEDD9-203ENST00000397378 ZNF546Q86UE3 836 aa6.27□□□□□ -1.41
NEDD9-203ENST00000397378 MRPL53Q96EL3 112 aaKnown RBP6.27□□□□□ -1.41
NEDD9-203ENST00000397378 FAM19A4Q96LR4 140 aa6.27□□□□□ -1.41
NEDD9-203ENST00000397378 MRPL16Q9NX20 251 aaKnown RBP6.27□□□□□ -1.41
NEDD9-203ENST00000397378 PSENENQ9NZ42 101 aa6.27□□□□□ -1.41
NEDD9-203ENST00000397378 TRAV5A0A0B4J249 113 aa6.26□□□□□ -1.41
NEDD9-203ENST00000397378 TRGV4A0A0C4DH28 118 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms