RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 SLC25A5P05141 298 aaKnown RBP12.42□□□□□ -0.42
UPK3A-202ENST00000396082 RAB2AP61019 212 aa12.42□□□□□ -0.42
UPK3A-202ENST00000396082 C9orf47Q6ZRZ4 202 aa12.42□□□□□ -0.42
UPK3A-202ENST00000396082 ZNF503Q96F45 646 aa12.42□□□□□ -0.42
UPK3A-202ENST00000396082 FAM210BQ96KR6 192 aa12.42□□□□□ -0.42
UPK3A-202ENST00000396082 Q9H3A6 140 aa12.42□□□□□ -0.42
UPK3A-202ENST00000396082 TIMM8BQ9Y5J9 83 aaPredicted RBP12.42□□□□□ -0.42
UPK3A-202ENST00000396082 C7orf71A4D174 169 aa12.41□□□□□ -0.42
UPK3A-202ENST00000396082 GPX1P07203 203 aa12.41□□□□□ -0.42
UPK3A-202ENST00000396082 P0DMU3 169 aa12.41□□□□□ -0.42
UPK3A-202ENST00000396082 FAM231AP0DMU4 169 aa12.41□□□□□ -0.42
UPK3A-202ENST00000396082 FAM231CP0DMU5 169 aa12.41□□□□□ -0.42
UPK3A-202ENST00000396082 Q5BKY6 102 aa12.41□□□□□ -0.42
UPK3A-202ENST00000396082 LYPD1Q8N2G4 141 aa12.41□□□□□ -0.42
UPK3A-202ENST00000396082 OR10G4Q8NGN3 311 aa12.41□□□□□ -0.42
UPK3A-202ENST00000396082 OR10G9Q8NGN4 311 aa12.41□□□□□ -0.42
UPK3A-202ENST00000396082 OR10G7Q8NGN6 311 aa12.41□□□□□ -0.42
UPK3A-202ENST00000396082 OR2T35Q8NGX2 323 aa12.41□□□□□ -0.42
UPK3A-202ENST00000396082 RNASE8Q8TDE3 154 aaKnown RBP12.41□□□□□ -0.42
UPK3A-202ENST00000396082 PYGO2Q9BRQ0 406 aa12.41□□□□□ -0.42
UPK3A-202ENST00000396082 NOP10Q9NPE3 64 aaKnown RBP12.41□□□□□ -0.42
UPK3A-202ENST00000396082 SNURFLB1AK76 121 aa12.4□□□□□ -0.42
UPK3A-202ENST00000396082 BTN1A1Q13410 526 aa12.4□□□□□ -0.42
UPK3A-202ENST00000396082 PQLC2Q6ZP29 291 aa12.4□□□□□ -0.42
UPK3A-202ENST00000396082 VGLL1Q99990 258 aa12.4□□□□□ -0.42
UPK3A-202ENST00000396082 KLLNB2CW77 178 aa12.39□□□□□ -0.43
UPK3A-202ENST00000396082 HMGB3O15347 200 aaKnown RBP12.39□□□□□ -0.43
UPK3A-202ENST00000396082 RNASE4P34096 147 aaKnown RBP12.39□□□□□ -0.43
UPK3A-202ENST00000396082 CDC34P49427 236 aaPredicted RBP12.39□□□□□ -0.43
UPK3A-202ENST00000396082 FAM74A1Q5RGS3 127 aa12.39□□□□□ -0.43
UPK3A-202ENST00000396082 TMEM88Q6PEY1 159 aa12.39□□□□□ -0.43
UPK3A-202ENST00000396082 UBE2DNLQ8IWF7 75 aa12.39□□□□□ -0.43
UPK3A-202ENST00000396082 CMTM2Q8TAZ6 248 aa12.39□□□□□ -0.43
UPK3A-202ENST00000396082 HYLS1Q96M11 299 aa12.39□□□□□ -0.43
UPK3A-202ENST00000396082 PSMG3Q9BT73 122 aaPredicted RBP12.39□□□□□ -0.43
UPK3A-202ENST00000396082 F5H768 121 aa12.38□□□□□ -0.43
UPK3A-202ENST00000396082 ATP5G1P05496 136 aa12.38□□□□□ -0.43
UPK3A-202ENST00000396082 CRISP2P16562 243 aa12.38□□□□□ -0.43
UPK3A-202ENST00000396082 ATP6V0CP27449 155 aa12.38□□□□□ -0.43
UPK3A-202ENST00000396082 ATP5G3P48201 142 aa12.38□□□□□ -0.43
UPK3A-202ENST00000396082 ZNF138P52744 262 aa12.38□□□□□ -0.43
UPK3A-202ENST00000396082 CD300CQ08708 224 aa12.38□□□□□ -0.43
UPK3A-202ENST00000396082 OR2G3Q8NGZ4 309 aa12.38□□□□□ -0.43
UPK3A-202ENST00000396082 Q8TAT8 98 aa12.38□□□□□ -0.43
UPK3A-202ENST00000396082 RXFP4Q8TDU9 374 aa12.38□□□□□ -0.43
UPK3A-202ENST00000396082 FAM19A4Q96LR4 140 aa12.38□□□□□ -0.43
UPK3A-202ENST00000396082 ZNF492Q9P255 531 aa12.38□□□□□ -0.43
UPK3A-202ENST00000396082 RPH3ALQ9UNE2 315 aa12.38□□□□□ -0.43
UPK3A-202ENST00000396082 BORCS7-ASMTA0A0B4J1R7 106 aa12.37□□□□□ -0.43
UPK3A-202ENST00000396082 CBY3A6NI87 242 aa12.37□□□□□ -0.43
UPK3A-202ENST00000396082 NMBP08949 121 aa12.37□□□□□ -0.43
UPK3A-202ENST00000396082 OTORQ9NRC9 128 aa12.37□□□□□ -0.43
UPK3A-202ENST00000396082 TNFSF18Q9UNG2 199 aa12.37□□□□□ -0.43
UPK3A-202ENST00000396082 RBAKDNA6NC62 111 aa12.36□□□□□ -0.43
UPK3A-202ENST00000396082 RNF222A6NCQ9 220 aa12.36□□□□□ -0.43
UPK3A-202ENST00000396082 MBP02144 154 aa12.36□□□□□ -0.43
UPK3A-202ENST00000396082 SERF2P84101 59 aa12.36□□□□□ -0.43
UPK3A-202ENST00000396082 POM121L12Q8N7R1 296 aa12.36□□□□□ -0.43
UPK3A-202ENST00000396082 ZNF680Q8NEM1 530 aa12.36□□□□□ -0.43
UPK3A-202ENST00000396082 PGPA6NDG6 321 aa12.35□□□□□ -0.43
UPK3A-202ENST00000396082 DIRC3C9JPN6 131 aa12.35□□□□□ -0.43
UPK3A-202ENST00000396082 RGS13O14921 159 aa12.35□□□□□ -0.43
UPK3A-202ENST00000396082 ARL14EPLP0DKL9 152 aa12.35□□□□□ -0.43
UPK3A-202ENST00000396082 RPL7L1Q6DKI1 246 aaKnown RBP12.35□□□□□ -0.43
UPK3A-202ENST00000396082 EIF4E3Q8N5X7 224 aaKnown RBP12.35□□□□□ -0.43
UPK3A-202ENST00000396082 ZFAND2AQ8N6M9 145 aa12.35□□□□□ -0.43
UPK3A-202ENST00000396082 C15orf53Q8NAA6 179 aa12.35□□□□□ -0.43
UPK3A-202ENST00000396082 GNPNAT1Q96EK6 184 aaPredicted RBP12.35□□□□□ -0.43
UPK3A-202ENST00000396082 SH3BGRL3Q9H299 93 aa12.35□□□□□ -0.43
UPK3A-202ENST00000396082 TRBV7-9A0A0J9YWB2 115 aa12.34□□□□□ -0.43
UPK3A-202ENST00000396082 GAGE12BA1L429 117 aa12.34□□□□□ -0.43
UPK3A-202ENST00000396082 ZNF324O75467 553 aaPredicted RBP12.34□□□□□ -0.43
UPK3A-202ENST00000396082 GAGE7O76087 117 aa12.34□□□□□ -0.43
UPK3A-202ENST00000396082 GAGE12FP0CL80 117 aa12.34□□□□□ -0.43
UPK3A-202ENST00000396082 GAGE12GP0CL81 117 aa12.34□□□□□ -0.43
UPK3A-202ENST00000396082 GAGE12IP0CL82 117 aa12.34□□□□□ -0.43
UPK3A-202ENST00000396082 PRR9Q5T870 116 aa12.34□□□□□ -0.43
UPK3A-202ENST00000396082 RAB24Q969Q5 203 aa12.34□□□□□ -0.43
UPK3A-202ENST00000396082 ARPC5LQ9BPX5 153 aa12.34□□□□□ -0.43
UPK3A-202ENST00000396082 ARPC5O15511 151 aa12.33□□□□□ -0.44
UPK3A-202ENST00000396082 STAG3L2P0CL84 134 aa12.33□□□□□ -0.44
UPK3A-202ENST00000396082 STAG3L3P0CL85 134 aa12.33□□□□□ -0.44
UPK3A-202ENST00000396082 LINC00467Q9BRT7 94 aa12.33□□□□□ -0.44
UPK3A-202ENST00000396082 ACTR3CQ9C0K3 210 aaPredicted RBP12.33□□□□□ -0.44
UPK3A-202ENST00000396082 GSN-AS1Q9NRJ2 163 aa12.33□□□□□ -0.44
UPK3A-202ENST00000396082 IGHV1OR15-1A0A075B7D0 117 aa12.32□□□□□ -0.44
UPK3A-202ENST00000396082 NUDT3O95989 172 aa12.32□□□□□ -0.44
UPK3A-202ENST00000396082 ANXA2RQ3ZCQ2 193 aa12.32□□□□□ -0.44
UPK3A-202ENST00000396082 GOLT1AQ6ZVE7 132 aa12.32□□□□□ -0.44
UPK3A-202ENST00000396082 IQCF2Q8IXL9 164 aa12.32□□□□□ -0.44
UPK3A-202ENST00000396082 CXorf1O96002 111 aa12.31□□□□□ -0.44
UPK3A-202ENST00000396082 GCHFRP30047 84 aa12.31□□□□□ -0.44
UPK3A-202ENST00000396082 DAZ2Q13117 558 aaKnown RBP12.31□□□□□ -0.44
UPK3A-202ENST00000396082 OR5I1Q13606 314 aa12.31□□□□□ -0.44
UPK3A-202ENST00000396082 LINC00612Q8N6U2 182 aa12.31□□□□□ -0.44
UPK3A-202ENST00000396082 ATG101Q9BSB4 218 aa12.31□□□□□ -0.44
UPK3A-202ENST00000396082 LENEPQ9Y5L5 61 aa12.31□□□□□ -0.44
UPK3A-202ENST00000396082 KMT2AQ03164 3969 aa12.3□□□□□ -0.44
UPK3A-202ENST00000396082 VPS13DQ5THJ4 4388 aa12.3□□□□□ -0.44
UPK3A-202ENST00000396082 TRGV2A0A075B6R0 118 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms