RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 IFITM3Q01628 133 aa9.45□□□□□ -0.9
SCAF11-203ENST00000395453 KRTAP19-1Q8IUB9 90 aa9.45□□□□□ -0.9
SCAF11-203ENST00000395453 SSBP4Q9BWG4 385 aaPredicted RBP9.45□□□□□ -0.9
SCAF11-203ENST00000395453 NMES1Q9C002 83 aa9.45□□□□□ -0.9
SCAF11-203ENST00000395453 SCRT2Q9NQ03 307 aa9.45□□□□□ -0.9
SCAF11-203ENST00000395453 DMBT1Q9UGM3 2413 aaPredicted RBP9.45□□□□□ -0.9
SCAF11-203ENST00000395453 A6NHS1 94 aa9.44□□□□□ -0.9
SCAF11-203ENST00000395453 E5RGE8 158 aa9.44□□□□□ -0.9
SCAF11-203ENST00000395453 H0YIZ8 118 aa9.44□□□□□ -0.9
SCAF11-203ENST00000395453 M0R3E3 92 aa9.44□□□□□ -0.9
SCAF11-203ENST00000395453 SIX6O95475 246 aa9.44□□□□□ -0.9
SCAF11-203ENST00000395453 RLN2P04090 185 aa9.44□□□□□ -0.9
SCAF11-203ENST00000395453 GCSAMLQ5JQS6 135 aa9.44□□□□□ -0.9
SCAF11-203ENST00000395453 CCDC28AQ8IWP9 274 aa9.44□□□□□ -0.9
SCAF11-203ENST00000395453 OR5C1Q8NGR4 320 aa9.44□□□□□ -0.9
SCAF11-203ENST00000395453 ZNRF2Q8NHG8 242 aa9.44□□□□□ -0.9
SCAF11-203ENST00000395453 FAM167A-AS1Q96KT0 104 aa9.44□□□□□ -0.9
SCAF11-203ENST00000395453 FAM19A4Q96LR4 140 aa9.44□□□□□ -0.9
SCAF11-203ENST00000395453 LINC00477Q96M19 166 aa9.44□□□□□ -0.9
SCAF11-203ENST00000395453 PYGO2Q9BRQ0 406 aa9.44□□□□□ -0.9
SCAF11-203ENST00000395453 KRTAP9-9Q9BYP9 154 aa9.44□□□□□ -0.9
SCAF11-203ENST00000395453 KRTAP9-4Q9BYQ2 154 aa9.44□□□□□ -0.9
SCAF11-203ENST00000395453 SLC25A31Q9H0C2 315 aa9.44□□□□□ -0.9
SCAF11-203ENST00000395453 PRELID1Q9Y255 219 aa9.44□□□□□ -0.9
SCAF11-203ENST00000395453 TRAV12-3A0A0B4J271 114 aa9.43□□□□□ -0.9
SCAF11-203ENST00000395453 ZNF324O75467 553 aaPredicted RBP9.43□□□□□ -0.9
SCAF11-203ENST00000395453 NUDT3O95989 172 aa9.43□□□□□ -0.9
SCAF11-203ENST00000395453 SLC25A5P05141 298 aaKnown RBP9.43□□□□□ -0.9
SCAF11-203ENST00000395453 PYYP10082 97 aa9.43□□□□□ -0.9
SCAF11-203ENST00000395453 CYCSP99999 105 aaKnown RBP9.43□□□□□ -0.9
SCAF11-203ENST00000395453 DAZ2Q13117 558 aaKnown RBP9.43□□□□□ -0.9
SCAF11-203ENST00000395453 ENKURQ8TC29 256 aa9.43□□□□□ -0.9
SCAF11-203ENST00000395453 RNF141Q8WVD5 230 aa9.43□□□□□ -0.9
SCAF11-203ENST00000395453 ATG101Q9BSB4 218 aa9.43□□□□□ -0.9
SCAF11-203ENST00000395453 SLC25A2Q9BXI2 301 aa9.43□□□□□ -0.9
SCAF11-203ENST00000395453 AGPAT4-IT1Q9H0P7 198 aa9.43□□□□□ -0.9
SCAF11-203ENST00000395453 OR5AC2Q9NZP5 309 aa9.43□□□□□ -0.9
SCAF11-203ENST00000395453 KLLNB2CW77 178 aa9.42□□□□□ -0.9
SCAF11-203ENST00000395453 PRAF2O60831 178 aa9.42□□□□□ -0.9
SCAF11-203ENST00000395453 ERCC8Q13216 396 aa9.42□□□□□ -0.9
SCAF11-203ENST00000395453 C9orf47Q6ZRZ4 202 aa9.42□□□□□ -0.9
SCAF11-203ENST00000395453 LINC00467Q9BRT7 94 aa9.42□□□□□ -0.9
SCAF11-203ENST00000395453 MARVELD1Q9BSK0 173 aa9.42□□□□□ -0.9
SCAF11-203ENST00000395453 LINC00588Q9Y4M8 146 aa9.42□□□□□ -0.9
SCAF11-203ENST00000395453 TIMM9Q9Y5J7 89 aa9.42□□□□□ -0.9
SCAF11-203ENST00000395453 SNURFLB1AK76 121 aa9.41□□□□□ -0.9
SCAF11-203ENST00000395453 INMT-MINDY4F8WBC2 141 aa9.41□□□□□ -0.9
SCAF11-203ENST00000395453 J3KRW8 73 aa9.41□□□□□ -0.9
SCAF11-203ENST00000395453 NMBP08949 121 aa9.41□□□□□ -0.9
SCAF11-203ENST00000395453 CCL18P55774 89 aa9.41□□□□□ -0.9
SCAF11-203ENST00000395453 H2BFSP57053 126 aa9.41□□□□□ -0.9
SCAF11-203ENST00000395453 EXOC3-AS1Q8N2X6 119 aa9.41□□□□□ -0.9
SCAF11-203ENST00000395453 THAP6Q8TBB0 222 aa9.41□□□□□ -0.9
SCAF11-203ENST00000395453 BLNKQ8WV28 456 aa9.41□□□□□ -0.9
SCAF11-203ENST00000395453 ZNF503Q96F45 646 aa9.41□□□□□ -0.9
SCAF11-203ENST00000395453 NBDYA0A0U1RRE5 68 aa9.4□□□□□ -0.9
SCAF11-203ENST00000395453 GAGE12BA1L429 117 aa9.4□□□□□ -0.9
SCAF11-203ENST00000395453 C7orf71A4D174 169 aa9.4□□□□□ -0.9
SCAF11-203ENST00000395453 H3BNG1 76 aa9.4□□□□□ -0.9
SCAF11-203ENST00000395453 GAGE7O76087 117 aa9.4□□□□□ -0.9
SCAF11-203ENST00000395453 NBEAP1P0C6P0 100 aa9.4□□□□□ -0.9
SCAF11-203ENST00000395453 GAGE12FP0CL80 117 aa9.4□□□□□ -0.9
SCAF11-203ENST00000395453 GAGE12GP0CL81 117 aa9.4□□□□□ -0.9
SCAF11-203ENST00000395453 GAGE12IP0CL82 117 aa9.4□□□□□ -0.9
SCAF11-203ENST00000395453 CRISP2P16562 243 aa9.4□□□□□ -0.9
SCAF11-203ENST00000395453 M6PRP20645 277 aa9.4□□□□□ -0.9
SCAF11-203ENST00000395453 HOXA5P20719 270 aa9.4□□□□□ -0.9
SCAF11-203ENST00000395453 CD300CQ08708 224 aa9.4□□□□□ -0.9
SCAF11-203ENST00000395453 ICAM4Q14773 271 aa9.4□□□□□ -0.9
SCAF11-203ENST00000395453 MIR17HGQ75NE6 70 aa9.4□□□□□ -0.9
SCAF11-203ENST00000395453 C11orf72Q8NBR9 251 aa9.4□□□□□ -0.9
SCAF11-203ENST00000395453 RXFP4Q8TDU9 374 aa9.4□□□□□ -0.9
SCAF11-203ENST00000395453 WDR61Q9GZS3 305 aaKnown RBP9.4□□□□□ -0.9
SCAF11-203ENST00000395453 OR51M1Q9H341 326 aa9.4□□□□□ -0.9
SCAF11-203ENST00000395453 PTTG2Q9NZH5 202 aa9.4□□□□□ -0.9
SCAF11-203ENST00000395453 APOBP04114 4563 aaKnown RBP9.4□□□□□ -0.9
SCAF11-203ENST00000395453 TRAV26-1A0A087WT03 109 aa9.39□□□□□ -0.91
SCAF11-203ENST00000395453 OR5I1Q13606 314 aa9.39□□□□□ -0.91
SCAF11-203ENST00000395453 CLINT1Q14677 625 aa9.39□□□□□ -0.91
SCAF11-203ENST00000395453 ANXA2RQ3ZCQ2 193 aa9.39□□□□□ -0.91
SCAF11-203ENST00000395453 LRRC37A5PQ49AS3 106 aa9.39□□□□□ -0.91
SCAF11-203ENST00000395453 PPP1R1CQ8WVI7 109 aa9.39□□□□□ -0.91
SCAF11-203ENST00000395453 FXYD5Q96DB9 178 aa9.39□□□□□ -0.91
SCAF11-203ENST00000395453 GNPNAT1Q96EK6 184 aaPredicted RBP9.39□□□□□ -0.91
SCAF11-203ENST00000395453 C18orf15Q96N68 181 aa9.39□□□□□ -0.91
SCAF11-203ENST00000395453 MRPL32Q9BYC8 188 aaKnown RBP9.39□□□□□ -0.91
SCAF11-203ENST00000395453 AAMDCQ9H7C9 122 aa9.39□□□□□ -0.91
SCAF11-203ENST00000395453 RNASE4P34096 147 aaKnown RBP9.38□□□□□ -0.91
SCAF11-203ENST00000395453 BTN1A1Q13410 526 aa9.38□□□□□ -0.91
SCAF11-203ENST00000395453 Q6ZTI0 123 aa9.38□□□□□ -0.91
SCAF11-203ENST00000395453 SSX7Q7RTT5 188 aa9.38□□□□□ -0.91
SCAF11-203ENST00000395453 EIF4E3Q8N5X7 224 aaKnown RBP9.38□□□□□ -0.91
SCAF11-203ENST00000395453 ZFAND2AQ8N6M9 145 aa9.38□□□□□ -0.91
SCAF11-203ENST00000395453 ZNF680Q8NEM1 530 aa9.38□□□□□ -0.91
SCAF11-203ENST00000395453 VGLL1Q99990 258 aa9.38□□□□□ -0.91
SCAF11-203ENST00000395453 PAXXQ9BUH6 204 aa9.38□□□□□ -0.91
SCAF11-203ENST00000395453 GSN-AS1Q9NRJ2 163 aa9.38□□□□□ -0.91
SCAF11-203ENST00000395453 KCNIP2Q9NS61 270 aa9.38□□□□□ -0.91
SCAF11-203ENST00000395453 IGKV2-40A0A087WW87 121 aaPredicted RBP9.37□□□□□ -0.91
SCAF11-203ENST00000395453 IGKV2D-40P01614 121 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms