RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 ARFGEF3Q5TH69 2177 aa13.8□□□□□ -0.2
SIN3A-203ENST00000394949 LEPROTO15243 131 aa13.8□□□□□ -0.2
SIN3A-203ENST00000394949 IGFL4Q6B9Z1 124 aa13.8□□□□□ -0.2
SIN3A-203ENST00000394949 H3BUX3 64 aa13.79□□□□□ -0.2
SIN3A-203ENST00000394949 LTAP01374 205 aa13.79□□□□□ -0.2
SIN3A-203ENST00000394949 HLA-DRB4P13762 266 aa13.79□□□□□ -0.2
SIN3A-203ENST00000394949 RPL36AP83881 106 aaKnown RBP13.79□□□□□ -0.2
SIN3A-203ENST00000394949 ZNF415Q09FC8 603 aa13.79□□□□□ -0.2
SIN3A-203ENST00000394949 PRSS57Q6UWY2 283 aa13.79□□□□□ -0.2
SIN3A-203ENST00000394949 TRPT1Q86TN4 253 aaKnown RBP13.79□□□□□ -0.2
SIN3A-203ENST00000394949 RPL36ALQ969Q0 106 aaKnown RBP13.79□□□□□ -0.2
SIN3A-203ENST00000394949 DNAJC30Q96LL9 226 aa13.79□□□□□ -0.2
SIN3A-203ENST00000394949 HLA-DRB4X5D2U9 266 aa13.79□□□□□ -0.2
SIN3A-203ENST00000394949 K7EM74 188 aa13.79□□□□□ -0.2
SIN3A-203ENST00000394949 C3orf36Q3SXR2 165 aa13.79□□□□□ -0.2
SIN3A-203ENST00000394949 H3BRN7 92 aa13.79□□□□□ -0.2
SIN3A-203ENST00000394949 NPC2P61916 151 aa13.79□□□□□ -0.2
SIN3A-203ENST00000394949 ERCC8Q13216 396 aa13.79□□□□□ -0.2
SIN3A-203ENST00000394949 KLRD1Q13241 179 aa13.79□□□□□ -0.2
SIN3A-203ENST00000394949 C17orf58Q2M2W7 97 aa13.79□□□□□ -0.2
SIN3A-203ENST00000394949 Q6ZSR3 168 aa13.79□□□□□ -0.2
SIN3A-203ENST00000394949 PLXNA2O75051 1894 aa13.79□□□□□ -0.2
SIN3A-203ENST00000394949 NLRC5Q86WI3 1866 aa13.79□□□□□ -0.2
SIN3A-203ENST00000394949 EDA2RQ9HAV5 297 aa13.79□□□□□ -0.2
SIN3A-203ENST00000394949 TMEM219Q86XT9 240 aa13.78□□□□□ -0.2
SIN3A-203ENST00000394949 PROK2Q9HC23 129 aa13.78□□□□□ -0.2
SIN3A-203ENST00000394949 TP53TG1Q9Y2A0 90 aa13.78□□□□□ -0.2
SIN3A-203ENST00000394949 HIST1H4AP62805 103 aaKnown RBP13.78□□□□□ -0.2
SIN3A-203ENST00000394949 C9orf153Q5TBE3 101 aa13.78□□□□□ -0.2
SIN3A-203ENST00000394949 GATD1Q8NB37 220 aa13.78□□□□□ -0.2
SIN3A-203ENST00000394949 MRPL35Q9NZE8 188 aaKnown RBP13.78□□□□□ -0.2
SIN3A-203ENST00000394949 FAM208BQ5VWN6 2430 aa13.78□□□□□ -0.2
SIN3A-203ENST00000394949 TRGV4A0A0C4DH28 118 aa13.78□□□□□ -0.2
SIN3A-203ENST00000394949 ZNF48Q96MX3 618 aaPredicted RBP13.78□□□□□ -0.2
SIN3A-203ENST00000394949 NPYP01303 97 aa13.77□□□□□ -0.2
SIN3A-203ENST00000394949 WT1-ASQ06250 92 aa13.77□□□□□ -0.21
SIN3A-203ENST00000394949 C1orf122Q6ZSJ8 110 aa13.77□□□□□ -0.21
SIN3A-203ENST00000394949 LCNL1Q6ZST4 164 aa13.77□□□□□ -0.21
SIN3A-203ENST00000394949 PRO1854Q9UHT4 67 aa13.77□□□□□ -0.21
SIN3A-203ENST00000394949 PAX4O43316 350 aa13.76□□□□□ -0.21
SIN3A-203ENST00000394949 NDUFS7O75251 213 aa13.76□□□□□ -0.21
SIN3A-203ENST00000394949 PRADC1Q9BSG0 188 aa13.76□□□□□ -0.21
SIN3A-203ENST00000394949 SPXQ9BT56 116 aa13.76□□□□□ -0.21
SIN3A-203ENST00000394949 NDPQ00604 133 aa13.76□□□□□ -0.21
SIN3A-203ENST00000394949 Q6ZR03 302 aa13.76□□□□□ -0.21
SIN3A-203ENST00000394949 ZC2HC1AQ96GY0 325 aa13.76□□□□□ -0.21
SIN3A-203ENST00000394949 CHCHD5Q9BSY4 110 aa13.76□□□□□ -0.21
SIN3A-203ENST00000394949 H3BMG7 143 aa13.76□□□□□ -0.21
SIN3A-203ENST00000394949 ZNF688P0C7X2 276 aa13.76□□□□□ -0.21
SIN3A-203ENST00000394949 IFITM1P13164 125 aa13.76□□□□□ -0.21
SIN3A-203ENST00000394949 LYPD2Q6UXB3 125 aa13.76□□□□□ -0.21
SIN3A-203ENST00000394949 PTPRQQ9UMZ3 2332 aa13.76□□□□□ -0.21
SIN3A-203ENST00000394949 C11orf44Q8N8P7 122 aa13.76□□□□□ -0.21
SIN3A-203ENST00000394949 SRD5A1P18405 259 aa13.75□□□□□ -0.21
SIN3A-203ENST00000394949 SMIM2Q9BVW6 85 aa13.75□□□□□ -0.21
SIN3A-203ENST00000394949 K7ENP7 123 aa13.75□□□□□ -0.21
SIN3A-203ENST00000394949 C12orf74Q32Q52 190 aa13.75□□□□□ -0.21
SIN3A-203ENST00000394949 FAM110DQ8TAY7 271 aaPredicted RBP13.75□□□□□ -0.21
SIN3A-203ENST00000394949 NUPR1O60356 82 aa13.75□□□□□ -0.21
SIN3A-203ENST00000394949 PHLDA1Q8WV24 401 aaPredicted RBP13.75□□□□□ -0.21
SIN3A-203ENST00000394949 ACACBO00763 2458 aa13.75□□□□□ -0.21
SIN3A-203ENST00000394949 PRIMA1Q86XR5 153 aa13.74□□□□□ -0.21
SIN3A-203ENST00000394949 WFDC12Q8WWY7 111 aa13.74□□□□□ -0.21
SIN3A-203ENST00000394949 E7EQL1 145 aa13.74□□□□□ -0.21
SIN3A-203ENST00000394949 FCN3O75636 299 aa13.74□□□□□ -0.21
SIN3A-203ENST00000394949 COL8A2P25067 703 aa13.74□□□□□ -0.21
SIN3A-203ENST00000394949 CEACAM8P31997 349 aaPredicted RBP13.74□□□□□ -0.21
SIN3A-203ENST00000394949 GAGE2AQ6NT46 116 aa13.74□□□□□ -0.21
SIN3A-203ENST00000394949 BRD3OSQ6XYD6 125 aa13.74□□□□□ -0.21
SIN3A-203ENST00000394949 HLA-DMBP28068 263 aa13.74□□□□□ -0.21
SIN3A-203ENST00000394949 UTF1Q5T230 341 aa13.74□□□□□ -0.21
SIN3A-203ENST00000394949 DTX1Q86Y01 620 aa13.74□□□□□ -0.21
SIN3A-203ENST00000394949 A0A087WX48 190 aa13.73□□□□□ -0.21
SIN3A-203ENST00000394949 IGFL3Q6UXB1 125 aa13.73□□□□□ -0.21
SIN3A-203ENST00000394949 C20orf78Q9BR46 151 aa13.73□□□□□ -0.21
SIN3A-203ENST00000394949 A0A087WWL8 130 aa13.73□□□□□ -0.21
SIN3A-203ENST00000394949 TCF15Q12870 199 aa13.73□□□□□ -0.21
SIN3A-203ENST00000394949 RHPN1-AS1Q9BWJ2 59 aa13.73□□□□□ -0.21
SIN3A-203ENST00000394949 FNDC1Q4ZHG4 1894 aaPredicted RBP13.73□□□□□ -0.21
SIN3A-203ENST00000394949 THSD7BQ9C0I4 1608 aa13.73□□□□□ -0.21
SIN3A-203ENST00000394949 SHISA9B4DS77 424 aa13.73□□□□□ -0.21
SIN3A-203ENST00000394949 DTX2Q86UW9 622 aa13.73□□□□□ -0.21
SIN3A-203ENST00000394949 IGLC1P0CG04 106 aa13.73□□□□□ -0.21
SIN3A-203ENST00000394949 FGF6P10767 208 aa13.73□□□□□ -0.21
SIN3A-203ENST00000394949 C1QTNF4Q9BXJ3 329 aa13.73□□□□□ -0.21
SIN3A-203ENST00000394949 BPESC1Q9GZL8 116 aa13.73□□□□□ -0.21
SIN3A-203ENST00000394949 SPANXCQ9NY87 97 aa13.73□□□□□ -0.21
SIN3A-203ENST00000394949 ZNRD1Q9P1U0 126 aa13.73□□□□□ -0.21
SIN3A-203ENST00000394949 K7EMI3 77 aa13.72□□□□□ -0.21
SIN3A-203ENST00000394949 ZNF134P52741 427 aa13.72□□□□□ -0.21
SIN3A-203ENST00000394949 IL17RELQ6ZVW7 336 aa13.72□□□□□ -0.21
SIN3A-203ENST00000394949 JPT2Q9H910 190 aa13.72□□□□□ -0.21
SIN3A-203ENST00000394949 DOCK9Q9BZ29 2069 aa13.72□□□□□ -0.21
SIN3A-203ENST00000394949 LINC01545Q5VT33 79 aa13.72□□□□□ -0.21
SIN3A-203ENST00000394949 DAZ1Q9NQZ3 744 aaKnown RBP13.72□□□□□ -0.21
SIN3A-203ENST00000394949 TEX36Q5VZQ5 186 aa13.71□□□□□ -0.21
SIN3A-203ENST00000394949 Q6ZVH6 145 aa13.71□□□□□ -0.21
SIN3A-203ENST00000394949 PIP4P2Q8N4L2 257 aa13.71□□□□□ -0.21
SIN3A-203ENST00000394949 DKK2Q9UBU2 259 aa13.71□□□□□ -0.21
SIN3A-203ENST00000394949 K7ERJ3 54 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms