RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 PRO0255Q9UI72 69 aa14.36□□□□□ -0.11
TRAF4-203ENST00000394925 ZNF253O75346 499 aa14.35□□□□□ -0.11
TRAF4-203ENST00000394925 ICAM4Q14773 271 aa14.35□□□□□ -0.11
TRAF4-203ENST00000394925 MRPL53Q96EL3 112 aaKnown RBP14.35□□□□□ -0.11
TRAF4-203ENST00000394925 FAM19A4Q96LR4 140 aa14.35□□□□□ -0.11
TRAF4-203ENST00000394925 LINC00477Q96M19 166 aa14.35□□□□□ -0.11
TRAF4-203ENST00000394925 C8orf49Q96NF6 230 aa14.35□□□□□ -0.11
TRAF4-203ENST00000394925 AGPAT4-IT1Q9H0P7 198 aa14.35□□□□□ -0.11
TRAF4-203ENST00000394925 MDFICQ9P1T7 246 aa14.35□□□□□ -0.11
TRAF4-203ENST00000394925 TP53TG3Q9ULZ0 132 aa14.35□□□□□ -0.11
TRAF4-203ENST00000394925 TRBV19A0A075B6N1 114 aa14.34□□□□□ -0.11
TRAF4-203ENST00000394925 TRAV9-2A0A087WT02 112 aa14.34□□□□□ -0.11
TRAF4-203ENST00000394925 NAP1L6A6NFF2 107 aa14.34□□□□□ -0.11
TRAF4-203ENST00000394925 L7N2F9 121 aa14.34□□□□□ -0.11
TRAF4-203ENST00000394925 PRAF2O60831 178 aa14.34□□□□□ -0.11
TRAF4-203ENST00000394925 MPDU1O75352 247 aa14.34□□□□□ -0.11
TRAF4-203ENST00000394925 INPP1P49441 399 aa14.34□□□□□ -0.11
TRAF4-203ENST00000394925 CRYBA4P53673 196 aa14.34□□□□□ -0.11
TRAF4-203ENST00000394925 VAMP2P63027 116 aa14.34□□□□□ -0.11
TRAF4-203ENST00000394925 MRPL23Q16540 153 aaKnown RBP14.34□□□□□ -0.11
TRAF4-203ENST00000394925 PFDN5Q99471 154 aa14.34□□□□□ -0.11
TRAF4-203ENST00000394925 HHLA3Q9XRX5 114 aa14.34□□□□□ -0.11
TRAF4-203ENST00000394925 LY96Q9Y6Y9 160 aa14.34□□□□□ -0.11
TRAF4-203ENST00000394925 RGS13O14921 159 aa14.33□□□□□ -0.12
TRAF4-203ENST00000394925 GPX1P07203 203 aa14.33□□□□□ -0.12
TRAF4-203ENST00000394925 BCAP31P51572 246 aa14.33□□□□□ -0.12
TRAF4-203ENST00000394925 SLAQ13239 276 aa14.33□□□□□ -0.12
TRAF4-203ENST00000394925 IBA57Q5T440 356 aaKnown RBP14.33□□□□□ -0.12
TRAF4-203ENST00000394925 CST7O76096 145 aa14.32□□□□□ -0.12
TRAF4-203ENST00000394925 NDUFB4O95168 129 aa14.32□□□□□ -0.12
TRAF4-203ENST00000394925 FHL2Q14192 279 aa14.32□□□□□ -0.12
TRAF4-203ENST00000394925 NEGR1Q7Z3B1 354 aa14.32□□□□□ -0.12
TRAF4-203ENST00000394925 C12orf45Q8N5I9 185 aaPredicted RBP14.32□□□□□ -0.12
TRAF4-203ENST00000394925 SRRQ9GZT4 340 aa14.32□□□□□ -0.12
TRAF4-203ENST00000394925 MSRB1Q9NZV6 116 aa14.32□□□□□ -0.12
TRAF4-203ENST00000394925 PRELID1Q9Y255 219 aa14.32□□□□□ -0.12
TRAF4-203ENST00000394925 TIMM9Q9Y5J7 89 aa14.32□□□□□ -0.12
TRAF4-203ENST00000394925 CRISP2P16562 243 aa14.31□□□□□ -0.12
TRAF4-203ENST00000394925 GCSHP23434 173 aa14.31□□□□□ -0.12
TRAF4-203ENST00000394925 BAK1Q16611 211 aa14.31□□□□□ -0.12
TRAF4-203ENST00000394925 Q6ZQT7 251 aa14.31□□□□□ -0.12
TRAF4-203ENST00000394925 EXOC3-AS1Q8N2X6 119 aa14.31□□□□□ -0.12
TRAF4-203ENST00000394925 MITD1Q8WV92 249 aa14.31□□□□□ -0.12
TRAF4-203ENST00000394925 VGLL1Q99990 258 aa14.31□□□□□ -0.12
TRAF4-203ENST00000394925 SLC39A9Q9NUM3 307 aa14.31□□□□□ -0.12
TRAF4-203ENST00000394925 UQCC1Q9NVA1 299 aa14.31□□□□□ -0.12
TRAF4-203ENST00000394925 WDR83OSQ9Y284 106 aa14.31□□□□□ -0.12
TRAF4-203ENST00000394925 LSM5Q9Y4Y9 91 aaKnown RBP14.31□□□□□ -0.12
TRAF4-203ENST00000394925 E5RGE8 158 aa14.3□□□□□ -0.12
TRAF4-203ENST00000394925 CCSO14618 274 aa14.3□□□□□ -0.12
TRAF4-203ENST00000394925 CAV2P51636 162 aa14.3□□□□□ -0.12
TRAF4-203ENST00000394925 HAMPP81172 84 aa14.3□□□□□ -0.12
TRAF4-203ENST00000394925 SPANXN2Q5MJ10 180 aa14.3□□□□□ -0.12
TRAF4-203ENST00000394925 PRR9Q5T870 116 aa14.3□□□□□ -0.12
TRAF4-203ENST00000394925 TRIQKQ629K1 86 aa14.3□□□□□ -0.12
TRAF4-203ENST00000394925 WFDC10BQ8IUB3 73 aa14.3□□□□□ -0.12
TRAF4-203ENST00000394925 BLNKQ8WV28 456 aa14.3□□□□□ -0.12
TRAF4-203ENST00000394925 ARPC5LQ9BPX5 153 aa14.3□□□□□ -0.12
TRAF4-203ENST00000394925 IGHV1OR15-1A0A075B7D0 117 aa14.29□□□□□ -0.12
TRAF4-203ENST00000394925 IGKV2-40A0A087WW87 121 aaPredicted RBP14.29□□□□□ -0.12
TRAF4-203ENST00000394925 FAM229AH3BQW9 127 aa14.29□□□□□ -0.12
TRAF4-203ENST00000394925 IGKV2D-40P01614 121 aaPredicted RBP14.29□□□□□ -0.12
TRAF4-203ENST00000394925 PYYP10082 97 aa14.29□□□□□ -0.12
TRAF4-203ENST00000394925 HIST1H1EP10412 219 aaKnown RBP14.29□□□□□ -0.12
TRAF4-203ENST00000394925 RPL29P47914 159 aaKnown RBP14.29□□□□□ -0.12
TRAF4-203ENST00000394925 C9orf47Q6ZRZ4 202 aa14.29□□□□□ -0.12
TRAF4-203ENST00000394925 ZFAND2AQ8N6M9 145 aa14.29□□□□□ -0.12
TRAF4-203ENST00000394925 C20orf85Q9H1P6 137 aa14.29□□□□□ -0.12
TRAF4-203ENST00000394925 TMEM14CQ9P0S9 112 aa14.29□□□□□ -0.12
TRAF4-203ENST00000394925 TRGV4A0A0C4DH28 118 aa14.28□□□□□ -0.12
TRAF4-203ENST00000394925 UBE2L5PA0A1B0GUS4 154 aa14.28□□□□□ -0.12
TRAF4-203ENST00000394925 FAM24AA6NFZ4 105 aa14.28□□□□□ -0.12
TRAF4-203ENST00000394925 EVI2AP22794 236 aa14.28□□□□□ -0.12
TRAF4-203ENST00000394925 BAXQ07812 192 aa14.28□□□□□ -0.12
TRAF4-203ENST00000394925 ZNF846Q147U1 533 aa14.28□□□□□ -0.12
TRAF4-203ENST00000394925 TMEM78Q5T7P6 136 aa14.28□□□□□ -0.12
TRAF4-203ENST00000394925 MRPL32Q9BYC8 188 aaKnown RBP14.28□□□□□ -0.12
TRAF4-203ENST00000394925 NMBP08949 121 aa14.27□□□□□ -0.13
TRAF4-203ENST00000394925 SRIP30626 198 aa14.27□□□□□ -0.13
TRAF4-203ENST00000394925 BTCP35070 178 aa14.27□□□□□ -0.13
TRAF4-203ENST00000394925 PDE6HQ13956 83 aa14.27□□□□□ -0.13
TRAF4-203ENST00000394925 FAM122CQ6P4D5 195 aa14.27□□□□□ -0.13
TRAF4-203ENST00000394925 AAMDCQ9H7C9 122 aa14.27□□□□□ -0.13
TRAF4-203ENST00000394925 CCDC160A6NGH7 325 aa14.26□□□□□ -0.13
TRAF4-203ENST00000394925 FAM25EA8MYX2 175 aa14.26□□□□□ -0.13
TRAF4-203ENST00000394925 K7EP13 123 aa14.26□□□□□ -0.13
TRAF4-203ENST00000394925 K7EQD1 137 aa14.26□□□□□ -0.13
TRAF4-203ENST00000394925 SFTA3P0C7M3 94 aa14.26□□□□□ -0.13
TRAF4-203ENST00000394925 ZNF415Q09FC8 603 aa14.26□□□□□ -0.13
TRAF4-203ENST00000394925 VWC2Q2TAL6 325 aa14.26□□□□□ -0.13
TRAF4-203ENST00000394925 CENPXA8MT69 81 aa14.25□□□□□ -0.13
TRAF4-203ENST00000394925 GYPEP15421 78 aa14.25□□□□□ -0.13
TRAF4-203ENST00000394925 PCNPQ8WW12 178 aaKnown RBP14.25□□□□□ -0.13
TRAF4-203ENST00000394925 C11orf1Q9H5F2 150 aa14.25□□□□□ -0.13
TRAF4-203ENST00000394925 ZNF492Q9P255 531 aa14.25□□□□□ -0.13
TRAF4-203ENST00000394925 FGF7P21781 194 aa14.24□□□□□ -0.13
TRAF4-203ENST00000394925 Q6ZSN1 163 aa14.24□□□□□ -0.13
TRAF4-203ENST00000394925 ZNF479Q96JC4 524 aa14.24□□□□□ -0.13
TRAF4-203ENST00000394925 IGLV5-52A0A0A0MRZ9 124 aa14.23□□□□□ -0.13
TRAF4-203ENST00000394925 C5orf51A6NDU8 294 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms