RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 PRSS47A8MTI9 375 aa7.81□□□□□ -1.16
UBE2D3-208ENST00000394803 H3BUT2 72 aa7.81□□□□□ -1.16
UBE2D3-208ENST00000394803 DPM2O94777 84 aa7.81□□□□□ -1.16
UBE2D3-208ENST00000394803 SMIM17P0DL12 118 aa7.81□□□□□ -1.16
UBE2D3-208ENST00000394803 SRSF1Q07955 248 aaKnown RBP eCLIP7.81□□□□□ -1.162e-8■□□□□ 10.6
UBE2D3-208ENST00000394803 VMO1Q7Z5L0 202 aa7.81□□□□□ -1.16
UBE2D3-208ENST00000394803 ATP6V0BQ99437 205 aa7.81□□□□□ -1.16
UBE2D3-208ENST00000394803 PRRC2CQ9Y520 2896 aaKnown RBP7.81□□□□□ -1.16
UBE2D3-208ENST00000394803 LOC400499M0QZD8 3231 aa7.81□□□□□ -1.16
UBE2D3-208ENST00000394803 A0A1W2PPM0 123 aa7.8□□□□□ -1.16
UBE2D3-208ENST00000394803 TAL2Q16559 108 aa7.8□□□□□ -1.16
UBE2D3-208ENST00000394803 TMEM78Q5T7P6 136 aa7.8□□□□□ -1.16
UBE2D3-208ENST00000394803 PIP4P2Q8N4L2 257 aa7.8□□□□□ -1.16
UBE2D3-208ENST00000394803 MYOZ3Q8TDC0 251 aa7.8□□□□□ -1.16
UBE2D3-208ENST00000394803 RNF185Q96GF1 192 aa7.8□□□□□ -1.16
UBE2D3-208ENST00000394803 VGLL1Q99990 258 aa7.8□□□□□ -1.16
UBE2D3-208ENST00000394803 S4R3C0 116 aa7.8□□□□□ -1.16
UBE2D3-208ENST00000394803 PRSS57Q6UWY2 283 aa7.8□□□□□ -1.16
UBE2D3-208ENST00000394803 Q8TAT8 98 aa7.8□□□□□ -1.16
UBE2D3-208ENST00000394803 LINC01560Q8TB33 94 aa7.8□□□□□ -1.16
UBE2D3-208ENST00000394803 SMAD5-AS1Q9Y6J3 95 aa7.8□□□□□ -1.16
UBE2D3-208ENST00000394803 ZNF80P51504 273 aaPredicted RBP7.79□□□□□ -1.16
UBE2D3-208ENST00000394803 ODF1Q14990 250 aa7.79□□□□□ -1.16
UBE2D3-208ENST00000394803 ZNF502Q8TBZ5 544 aa7.79□□□□□ -1.16
UBE2D3-208ENST00000394803 SPCS1Q9Y6A9 102 aa7.79□□□□□ -1.16
UBE2D3-208ENST00000394803 SMKR1H3BMG3 65 aa7.79□□□□□ -1.16
UBE2D3-208ENST00000394803 K7EMI3 77 aa7.79□□□□□ -1.16
UBE2D3-208ENST00000394803 PLNP26678 52 aa7.79□□□□□ -1.16
UBE2D3-208ENST00000394803 KLRD1Q13241 179 aa7.79□□□□□ -1.16
UBE2D3-208ENST00000394803 EEF1AKMT3Q96AZ1 226 aa7.79□□□□□ -1.16
UBE2D3-208ENST00000394803 METTL26Q96S19 204 aa7.79□□□□□ -1.16
UBE2D3-208ENST00000394803 CSTL1Q9H114 145 aa7.79□□□□□ -1.16
UBE2D3-208ENST00000394803 LENEPQ9Y5L5 61 aa7.79□□□□□ -1.16
UBE2D3-208ENST00000394803 TRBV7-1A0A0A6YYK4 115 aa7.78□□□□□ -1.16
UBE2D3-208ENST00000394803 IGHV7-81A0A0B4J1V7 117 aa7.78□□□□□ -1.16
UBE2D3-208ENST00000394803 FAM90A27PA6NNH2 459 aa7.78□□□□□ -1.16
UBE2D3-208ENST00000394803 BUB3O43684 328 aa7.78□□□□□ -1.16
UBE2D3-208ENST00000394803 NDPQ00604 133 aa7.78□□□□□ -1.16
UBE2D3-208ENST00000394803 LAGE3Q14657 143 aa7.78□□□□□ -1.16
UBE2D3-208ENST00000394803 SAMD5Q5TGI4 173 aa7.78□□□□□ -1.16
UBE2D3-208ENST00000394803 IL17RELQ6ZVW7 336 aa7.78□□□□□ -1.16
UBE2D3-208ENST00000394803 DTX2Q86UW9 622 aa7.78□□□□□ -1.16
UBE2D3-208ENST00000394803 MRAP2Q96G30 205 aa7.78□□□□□ -1.16
UBE2D3-208ENST00000394803 CHAC1Q9BUX1 264 aa7.78□□□□□ -1.16
UBE2D3-208ENST00000394803 MEGF9Q9H1U4 602 aa7.78□□□□□ -1.16
UBE2D3-208ENST00000394803 DKK2Q9UBU2 259 aa7.78□□□□□ -1.16
UBE2D3-208ENST00000394803 DSPP15924 2871 aaKnown RBP7.78□□□□□ -1.16
UBE2D3-208ENST00000394803 IGHG4P01861 327 aa7.78□□□□□ -1.16
UBE2D3-208ENST00000394803 C15orf32Q32M92 178 aa7.78□□□□□ -1.16
UBE2D3-208ENST00000394803 PCP2Q8IVA1 136 aa7.78□□□□□ -1.16
UBE2D3-208ENST00000394803 BCL6BQ8N143 479 aaPredicted RBP7.78□□□□□ -1.16
UBE2D3-208ENST00000394803 DYNAPQ8N1N2 210 aa7.78□□□□□ -1.16
UBE2D3-208ENST00000394803 C18orf15Q96N68 181 aa7.78□□□□□ -1.16
UBE2D3-208ENST00000394803 NBEAQ8NFP9 2946 aa7.77□□□□□ -1.17
UBE2D3-208ENST00000394803 IGHV4-4A0A075B6R2 117 aa7.77□□□□□ -1.17
UBE2D3-208ENST00000394803 G3V4G9 280 aa7.77□□□□□ -1.17
UBE2D3-208ENST00000394803 K7ENP7 123 aa7.77□□□□□ -1.17
UBE2D3-208ENST00000394803 IGHV3-23P01764 117 aa7.77□□□□□ -1.17
UBE2D3-208ENST00000394803 GCSHP23434 173 aa7.77□□□□□ -1.17
UBE2D3-208ENST00000394803 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.77□□□□□ -1.17
UBE2D3-208ENST00000394803 Q8N9W7 124 aa7.77□□□□□ -1.17
UBE2D3-208ENST00000394803 TMEM158Q8WZ71 300 aa7.77□□□□□ -1.17
UBE2D3-208ENST00000394803 FOXC2Q99958 501 aa7.77□□□□□ -1.17
UBE2D3-208ENST00000394803 ZFAND3Q9H8U3 227 aa7.77□□□□□ -1.17
UBE2D3-208ENST00000394803 ZNF207O43670 478 aaKnown RBP7.76□□□□□ -1.17
UBE2D3-208ENST00000394803 SLC25A16P16260 332 aa7.76□□□□□ -1.17
UBE2D3-208ENST00000394803 C9orf47Q6ZRZ4 202 aa7.76□□□□□ -1.17
UBE2D3-208ENST00000394803 NEGR1Q7Z3B1 354 aa7.76□□□□□ -1.17
UBE2D3-208ENST00000394803 TM2D2Q9BX73 214 aa7.76□□□□□ -1.17
UBE2D3-208ENST00000394803 HHLA3Q9XRX5 114 aa7.76□□□□□ -1.17
UBE2D3-208ENST00000394803 DMXL2Q8TDJ6 3036 aa7.76□□□□□ -1.17
UBE2D3-208ENST00000394803 CEP295Q9C0D2 2601 aa7.76□□□□□ -1.17
UBE2D3-208ENST00000394803 LINC01549A6NIU2 74 aa7.76□□□□□ -1.17
UBE2D3-208ENST00000394803 J3QR89 54 aa7.76□□□□□ -1.17
UBE2D3-208ENST00000394803 FXYD7P58549 80 aa7.76□□□□□ -1.17
UBE2D3-208ENST00000394803 FOXC1Q12948 553 aa7.76□□□□□ -1.17
UBE2D3-208ENST00000394803 PRR30Q53SZ7 412 aaPredicted RBP7.76□□□□□ -1.17
UBE2D3-208ENST00000394803 C11orf71Q6IPW1 123 aa7.76□□□□□ -1.17
UBE2D3-208ENST00000394803 RAB37Q96AX2 223 aa7.76□□□□□ -1.17
UBE2D3-208ENST00000394803 PSMG3-AS1Q96PY0 264 aa7.76□□□□□ -1.17
UBE2D3-208ENST00000394803 JMJD8Q96S16 334 aa7.76□□□□□ -1.17
UBE2D3-208ENST00000394803 TRAV12-1A0A0B4J245 112 aa7.75□□□□□ -1.17
UBE2D3-208ENST00000394803 A0A1W2PRD5 423 aa7.75□□□□□ -1.17
UBE2D3-208ENST00000394803 A0A1W2PRF3 423 aa7.75□□□□□ -1.17
UBE2D3-208ENST00000394803 A0A1W2PRM7 423 aa7.75□□□□□ -1.17
UBE2D3-208ENST00000394803 LINC01619G3V211 115 aa7.75□□□□□ -1.17
UBE2D3-208ENST00000394803 PPP1R17O96001 155 aa7.75□□□□□ -1.17
UBE2D3-208ENST00000394803 UBE2E1P51965 193 aa7.75□□□□□ -1.17
UBE2D3-208ENST00000394803 ORMDL2Q53FV1 153 aa7.75□□□□□ -1.17
UBE2D3-208ENST00000394803 ZC2HC1BQ5TFG8 222 aa7.75□□□□□ -1.17
UBE2D3-208ENST00000394803 SPANXN1Q5VSR9 72 aa7.75□□□□□ -1.17
UBE2D3-208ENST00000394803 C9orf139Q6ZV77 190 aa7.75□□□□□ -1.17
UBE2D3-208ENST00000394803 CEND1Q8N111 149 aa7.75□□□□□ -1.17
UBE2D3-208ENST00000394803 MSRB1Q9NZV6 116 aa7.75□□□□□ -1.17
UBE2D3-208ENST00000394803 MSRB2Q9Y3D2 182 aa7.75□□□□□ -1.17
UBE2D3-208ENST00000394803 PIEZO1Q92508 2521 aa7.75□□□□□ -1.17
UBE2D3-208ENST00000394803 IGLV2-18A0A075B6J9 118 aa7.75□□□□□ -1.17
UBE2D3-208ENST00000394803 A0A087WX48 190 aa7.75□□□□□ -1.17
UBE2D3-208ENST00000394803 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.75□□□□□ -1.17
UBE2D3-208ENST00000394803 CCL21O00585 134 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms