RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 SSX7Q7RTT5 188 aa12.67□□□□□ -0.38
PDLIM7-205ENST00000393551 CCDC28AQ8IWP9 274 aa12.67□□□□□ -0.38
PDLIM7-205ENST00000393551 EXOC3-AS1Q8N2X6 119 aa12.67□□□□□ -0.38
PDLIM7-205ENST00000393551 FAM167A-AS1Q96KT0 104 aa12.67□□□□□ -0.38
PDLIM7-205ENST00000393551 SLC25A2Q9BXI2 301 aa12.67□□□□□ -0.38
PDLIM7-205ENST00000393551 AGPAT4-IT1Q9H0P7 198 aa12.67□□□□□ -0.38
PDLIM7-205ENST00000393551 DNAH5Q8TE73 4624 aa12.66□□□□□ -0.38
PDLIM7-205ENST00000393551 A0A0J9YY99 117 aa12.66□□□□□ -0.38
PDLIM7-205ENST00000393551 KLLNB2CW77 178 aa12.66□□□□□ -0.38
PDLIM7-205ENST00000393551 H0YIZ8 118 aa12.66□□□□□ -0.38
PDLIM7-205ENST00000393551 Q6ZTI0 123 aa12.66□□□□□ -0.38
PDLIM7-205ENST00000393551 C11orf72Q8NBR9 251 aa12.66□□□□□ -0.38
PDLIM7-205ENST00000393551 THAP6Q8TBB0 222 aa12.66□□□□□ -0.38
PDLIM7-205ENST00000393551 PYGO2Q9BRQ0 406 aa12.66□□□□□ -0.38
PDLIM7-205ENST00000393551 KRTAP1-5Q9BYS1 174 aa12.66□□□□□ -0.38
PDLIM7-205ENST00000393551 OR5AC2Q9NZP5 309 aa12.66□□□□□ -0.38
PDLIM7-205ENST00000393551 SNURFLB1AK76 121 aa12.65□□□□□ -0.38
PDLIM7-205ENST00000393551 INMT-MINDY4F8WBC2 141 aa12.65□□□□□ -0.38
PDLIM7-205ENST00000393551 PRAF2O60831 178 aa12.65□□□□□ -0.38
PDLIM7-205ENST00000393551 RLN2P04090 185 aa12.65□□□□□ -0.38
PDLIM7-205ENST00000393551 SLC25A5P05141 298 aaKnown RBP12.65□□□□□ -0.38
PDLIM7-205ENST00000393551 M6PRP20645 277 aa12.65□□□□□ -0.38
PDLIM7-205ENST00000393551 DAZ2Q13117 558 aaKnown RBP12.65□□□□□ -0.38
PDLIM7-205ENST00000393551 BTN1A1Q13410 526 aa12.65□□□□□ -0.38
PDLIM7-205ENST00000393551 PDE6HQ13956 83 aa12.65□□□□□ -0.38
PDLIM7-205ENST00000393551 MIR17HGQ75NE6 70 aa12.65□□□□□ -0.38
PDLIM7-205ENST00000393551 C6orf223Q8N319 242 aa12.65□□□□□ -0.38
PDLIM7-205ENST00000393551 OR5C1Q8NGR4 320 aa12.65□□□□□ -0.38
PDLIM7-205ENST00000393551 RXFP4Q8TDU9 374 aa12.65□□□□□ -0.38
PDLIM7-205ENST00000393551 BLNKQ8WV28 456 aa12.65□□□□□ -0.38
PDLIM7-205ENST00000393551 GNPNAT1Q96EK6 184 aaPredicted RBP12.65□□□□□ -0.38
PDLIM7-205ENST00000393551 TMPRSS5Q9H3S3 457 aa12.65□□□□□ -0.38
PDLIM7-205ENST00000393551 C7orf71A4D174 169 aa12.64□□□□□ -0.39
PDLIM7-205ENST00000393551 MPDU1O75352 247 aa12.64□□□□□ -0.39
PDLIM7-205ENST00000393551 ESRGQ1W209 222 aa12.64□□□□□ -0.39
PDLIM7-205ENST00000393551 PRR9Q5T870 116 aa12.64□□□□□ -0.39
PDLIM7-205ENST00000393551 Q6ZQT7 251 aa12.64□□□□□ -0.39
PDLIM7-205ENST00000393551 ZNF503Q96F45 646 aa12.64□□□□□ -0.39
PDLIM7-205ENST00000393551 KRTAP4-5Q9BYR2 181 aa12.64□□□□□ -0.39
PDLIM7-205ENST00000393551 Q9H8V8 135 aa12.64□□□□□ -0.39
PDLIM7-205ENST00000393551 GSN-AS1Q9NRJ2 163 aa12.64□□□□□ -0.39
PDLIM7-205ENST00000393551 TIMM9Q9Y5J7 89 aa12.64□□□□□ -0.39
PDLIM7-205ENST00000393551 CLINT1Q14677 625 aa12.63□□□□□ -0.39
PDLIM7-205ENST00000393551 C9orf47Q6ZRZ4 202 aa12.63□□□□□ -0.39
PDLIM7-205ENST00000393551 LINC00477Q96M19 166 aa12.63□□□□□ -0.39
PDLIM7-205ENST00000393551 VGLL1Q99990 258 aa12.63□□□□□ -0.39
PDLIM7-205ENST00000393551 LINC00467Q9BRT7 94 aa12.63□□□□□ -0.39
PDLIM7-205ENST00000393551 PRELID1Q9Y255 219 aa12.63□□□□□ -0.39
PDLIM7-205ENST00000393551 IGKV2-40A0A087WW87 121 aaPredicted RBP12.62□□□□□ -0.39
PDLIM7-205ENST00000393551 IGKV2D-40P01614 121 aaPredicted RBP12.62□□□□□ -0.39
PDLIM7-205ENST00000393551 CRISP2P16562 243 aa12.62□□□□□ -0.39
PDLIM7-205ENST00000393551 ICAM4Q14773 271 aa12.62□□□□□ -0.39
PDLIM7-205ENST00000393551 LRRC37A5PQ49AS3 106 aa12.62□□□□□ -0.39
PDLIM7-205ENST00000393551 ZFAND2AQ8N6M9 145 aa12.62□□□□□ -0.39
PDLIM7-205ENST00000393551 VSIG2Q96IQ7 327 aa12.62□□□□□ -0.39
PDLIM7-205ENST00000393551 NMES1Q9C002 83 aa12.62□□□□□ -0.39
PDLIM7-205ENST00000393551 E5RGE8 158 aa12.61□□□□□ -0.39
PDLIM7-205ENST00000393551 H3BNG1 76 aa12.61□□□□□ -0.39
PDLIM7-205ENST00000393551 RNASE4P34096 147 aaKnown RBP12.61□□□□□ -0.39
PDLIM7-205ENST00000393551 FAM122CQ6P4D5 195 aa12.61□□□□□ -0.39
PDLIM7-205ENST00000393551 FXYD5Q96DB9 178 aa12.61□□□□□ -0.39
PDLIM7-205ENST00000393551 C18orf15Q96N68 181 aa12.61□□□□□ -0.39
PDLIM7-205ENST00000393551 WDR61Q9GZS3 305 aaKnown RBP12.61□□□□□ -0.39
PDLIM7-205ENST00000393551 TP53TG3Q9ULZ0 132 aa12.61□□□□□ -0.39
PDLIM7-205ENST00000393551 KLF12Q9Y4X4 402 aa12.61□□□□□ -0.39
PDLIM7-205ENST00000393551 NBEAP1P0C6P0 100 aa12.6□□□□□ -0.39
PDLIM7-205ENST00000393551 H2BFSP57053 126 aa12.6□□□□□ -0.39
PDLIM7-205ENST00000393551 ANXA2RQ3ZCQ2 193 aa12.6□□□□□ -0.39
PDLIM7-205ENST00000393551 UPK3BQ9BT76 320 aa12.6□□□□□ -0.39
PDLIM7-205ENST00000393551 OR10J4P0C629 311 aa12.59□□□□□ -0.39
PDLIM7-205ENST00000393551 EIF4E3Q8N5X7 224 aaKnown RBP12.59□□□□□ -0.39
PDLIM7-205ENST00000393551 ZNF680Q8NEM1 530 aa12.59□□□□□ -0.39
PDLIM7-205ENST00000393551 PHYHIPLQ96FC7 376 aa12.59□□□□□ -0.39
PDLIM7-205ENST00000393551 SLC25A31Q9H0C2 315 aa12.59□□□□□ -0.39
PDLIM7-205ENST00000393551 OR51M1Q9H341 326 aa12.59□□□□□ -0.39
PDLIM7-205ENST00000393551 AAMDCQ9H7C9 122 aa12.59□□□□□ -0.39
PDLIM7-205ENST00000393551 ZNF492Q9P255 531 aa12.59□□□□□ -0.39
PDLIM7-205ENST00000393551 A0A096LPF7 62 aa12.58□□□□□ -0.4
PDLIM7-205ENST00000393551 SPINK4O60575 86 aa12.58□□□□□ -0.4
PDLIM7-205ENST00000393551 GPX1P07203 203 aa12.58□□□□□ -0.4
PDLIM7-205ENST00000393551 NMBP08949 121 aa12.58□□□□□ -0.4
PDLIM7-205ENST00000393551 TCL1AP56279 114 aa12.58□□□□□ -0.4
PDLIM7-205ENST00000393551 Q9H3A6 140 aa12.58□□□□□ -0.4
PDLIM7-205ENST00000393551 TRGV1A0A0A0MS02 117 aa12.57□□□□□ -0.4
PDLIM7-205ENST00000393551 Q8TAT8 98 aa12.57□□□□□ -0.4
PDLIM7-205ENST00000393551 PPP1R1CQ8WVI7 109 aa12.57□□□□□ -0.4
PDLIM7-205ENST00000393551 PAXXQ9BUH6 204 aa12.57□□□□□ -0.4
PDLIM7-205ENST00000393551 FUT9Q9Y231 359 aa12.57□□□□□ -0.4
PDLIM7-205ENST00000393551 MRPS16Q9Y3D3 137 aaKnown RBP12.57□□□□□ -0.4
PDLIM7-205ENST00000393551 TRGV2A0A075B6R0 118 aa12.56□□□□□ -0.4
PDLIM7-205ENST00000393551 A0A1B0GVG6 124 aa12.56□□□□□ -0.4
PDLIM7-205ENST00000393551 C16orf90A8MZG2 172 aa12.56□□□□□ -0.4
PDLIM7-205ENST00000393551 TMEM78Q5T7P6 136 aa12.56□□□□□ -0.4
PDLIM7-205ENST00000393551 MRPL32Q9BYC8 188 aaKnown RBP12.56□□□□□ -0.4
PDLIM7-205ENST00000393551 IBA57Q5T440 356 aaKnown RBP12.55□□□□□ -0.4
PDLIM7-205ENST00000393551 ALG5Q9Y673 324 aa12.55□□□□□ -0.4
PDLIM7-205ENST00000393551 IGHV1OR15-1A0A075B7D0 117 aa12.54□□□□□ -0.4
PDLIM7-205ENST00000393551 EIF3GO75821 320 aaKnown RBP eCLIP12.54□□□□□ -0.4
PDLIM7-205ENST00000393551 ZNF138P52744 262 aa12.54□□□□□ -0.4
PDLIM7-205ENST00000393551 RANP62826 216 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms