RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 GGTLC3B5MD39 225 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 ZNF73O43830 326 aaPredicted RBP2.61□□□□□ -1.99
XRN1-202ENST00000392981 IMMP2LQ96T52 175 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 DUOX1Q9NRD9 1551 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 SPAARA0A1B0GVQ0 90 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 LEPROTO15243 131 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 RBP4P02753 201 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 CFC1BP0CG36 223 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 CRYGSP22914 178 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 RBM3P98179 157 aaKnown RBP2.61□□□□□ -1.99
XRN1-202ENST00000392981 C11orf87Q6NUJ2 197 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 PCP2Q8IVA1 136 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 ATOH7Q8N100 152 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 C7orf33Q8WU49 177 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 PYGO2Q9BRQ0 406 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 TRAV4A0A0B4J268 109 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 ARRDC5A6NEK1 342 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 IGHV3-23P01764 117 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 CRYBB3P26998 211 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 LINC00313P59037 77 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 ATXN8Q156A1 80 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 SPANXN1Q5VSR9 72 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 GLIPR1L1Q6UWM5 242 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 LINC00337Q8N6G1 96 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 ZNF414Q96IQ9 312 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 NXT2Q9NPJ8 142 aaKnown RBP2.61□□□□□ -1.99
XRN1-202ENST00000392981 C8orf17Q9NRJ1 99 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 PLXND1Q9Y4D7 1925 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 LOXHD1Q8IVV2 1947 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 IGHV5-10-1A0A0J9YXX1 117 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 H3BQ15 152 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 H3BUT2 72 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 CDC42EP2O14613 210 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 NPFFO15130 113 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 HLA-DQA1P01909 254 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 NNATQ16517 81 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 ZNF678Q5SXM1 525 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 C1orf140Q5VVS0 124 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 UNQ5815/PRO19632Q6UWF5 114 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 LCA10Q71F78 164 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 ZNF689Q96CS4 500 aaPredicted RBP2.6□□□□□ -1.99
XRN1-202ENST00000392981 OTORQ9NRC9 128 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 MEGF6O75095 1541 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 COL4A5P29400 1685 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 TRAV12-3A0A0B4J271 114 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 LTAP01374 205 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 STATHP02808 62 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 SPINK8P0C7L1 97 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 SNRPGP62308 76 aaKnown RBP2.6□□□□□ -1.99
XRN1-202ENST00000392981 EGFEM1PQ0D2K5 195 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 RSPO1Q2MKA7 263 aaPredicted RBP2.6□□□□□ -1.99
XRN1-202ENST00000392981 GTSCR1Q86UQ5 136 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 ZNRD1Q9P1U0 126 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 ATRXP46100 2492 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 TMSB15BA0A087X1C1 80 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 NCR2O95944 276 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 GPX1P07203 203 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 FOXA1P55317 472 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 CEND1Q8N111 149 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 LSM10Q969L4 123 aaKnown RBP2.6□□□□□ -1.99
XRN1-202ENST00000392981 RALGAPA1Q6GYQ0 2036 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 MGAMO43451 1857 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 ARID2Q68CP9 1835 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 TRGV10A0A0A0MS01 117 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 CLPSL1A2RUU4 121 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 H0YJW9 148 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 TMEM250H0YL14 139 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 MRPL33O75394 65 aaKnown RBP2.6□□□□□ -1.99
XRN1-202ENST00000392981 GYPBP06028 91 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 PRB4P10163 310 aaPredicted RBP2.6□□□□□ -1.99
XRN1-202ENST00000392981 CKS2P33552 79 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 ZNF137PP52743 207 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 MPV17LQ2QL34 196 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 C2orf83Q53S99 150 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 SOSTDC1Q6X4U4 206 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 KTN1-AS1Q86SY8 53 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 TYMSOSQ8TAI1 123 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 ARFGEF1Q9Y6D6 1849 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 A0A1B0GX51 115 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 IGKV1-39P01597 117 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 IGLV2-8P01709 118 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 IGKV1D-39P04432 117 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 IGLC1P0CG04 106 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 RPL18Q07020 188 aaKnown RBP2.6□□□□□ -1.99
XRN1-202ENST00000392981 C10orf128Q5T292 105 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 MSRB3Q8IXL7 192 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 ZNF581Q9P0T4 197 aa2.6□□□□□ -1.99
XRN1-202ENST00000392981 DYNLT3P51808 116 aa2.59□□□□□ -1.99
XRN1-202ENST00000392981 SSBP1Q04837 148 aaKnown RBP2.59□□□□□ -1.99
XRN1-202ENST00000392981 RRN3P1Q2M238 152 aa2.59□□□□□ -1.99
XRN1-202ENST00000392981 DEFB134Q4QY38 66 aa2.59□□□□□ -1.99
XRN1-202ENST00000392981 TMEM155Q4W5P6 130 aa2.59□□□□□ -1.99
XRN1-202ENST00000392981 C1orf158Q8N1D5 194 aa2.59□□□□□ -1.99
XRN1-202ENST00000392981 OR10AC1Q8NH08 325 aa2.59□□□□□ -1.99
XRN1-202ENST00000392981 PP6455Q8WZ26 134 aa2.59□□□□□ -1.99
XRN1-202ENST00000392981 VOPP1Q96AW1 172 aa2.59□□□□□ -1.99
XRN1-202ENST00000392981 ZNF106Q9H2Y7 1883 aaKnown RBP2.59□□□□□ -1.99
XRN1-202ENST00000392981 SH2D1AO60880 128 aa2.59□□□□□ -1.99
XRN1-202ENST00000392981 TCRAP04437 139 aa2.59□□□□□ -1.99
XRN1-202ENST00000392981 LINC00694P0DN24 101 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms