RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 IBA57Q5T440 356 aaKnown RBP14.99□□□□□ -0.01
CCDC50-202ENST00000392456 ITPR2Q14571 2701 aa14.99□□□□□ -0.01
CCDC50-202ENST00000392456 CCDC168Q8NDH2 2452 aa14.98□□□□□ -0.01
CCDC50-202ENST00000392456 ENSAO43768 121 aaKnown RBP14.98□□□□□ -0.01
CCDC50-202ENST00000392456 SAA1P0DJI8 122 aaPredicted RBP14.98□□□□□ -0.01
CCDC50-202ENST00000392456 TMEM116Q8NCL8 245 aa14.98□□□□□ -0.01
CCDC50-202ENST00000392456 OR11H6Q8NGC7 330 aa14.98□□□□□ -0.01
CCDC50-202ENST00000392456 GLMPQ8WWB7 406 aa14.98□□□□□ -0.01
CCDC50-202ENST00000392456 SIRPDQ9H106 197 aa14.98□□□□□ -0.01
CCDC50-202ENST00000392456 FOXH1O75593 365 aa14.97□□□□□ -0.01
CCDC50-202ENST00000392456 FXYD2P54710 66 aa14.97□□□□□ -0.01
CCDC50-202ENST00000392456 FLYWCH2Q96CP2 140 aaKnown RBP14.97□□□□□ -0.01
CCDC50-202ENST00000392456 PRELID3AQ96N28 172 aa14.97□□□□□ -0.01
CCDC50-202ENST00000392456 IGHV1-3A0A0C4DH29 117 aa14.97□□□□□ -0.01
CCDC50-202ENST00000392456 A0A1B0GWB2 263 aa14.97□□□□□ -0.01
CCDC50-202ENST00000392456 OPRK1P41145 380 aa14.97□□□□□ -0.01
CCDC50-202ENST00000392456 ABCA1O95477 2261 aa14.96□□□□□ -0.01
CCDC50-202ENST00000392456 K7ERJ3 54 aa14.96□□□□□ -0.01
CCDC50-202ENST00000392456 SCGB2A1O75556 95 aa14.96□□□□□ -0.01
CCDC50-202ENST00000392456 POU2AF1Q16633 256 aa14.96□□□□□ -0.01
CCDC50-202ENST00000392456 MOB3BQ86TA1 216 aa14.96□□□□□ -0.01
CCDC50-202ENST00000392456 ODF3BA8MYP8 253 aa14.95□□□□□ -0.02
CCDC50-202ENST00000392456 AREGP15514 252 aa14.95□□□□□ -0.02
CCDC50-202ENST00000392456 HOXB4P17483 251 aaPredicted RBP14.95□□□□□ -0.02
CCDC50-202ENST00000392456 CNTFRP26992 372 aa14.95□□□□□ -0.02
CCDC50-202ENST00000392456 PSG5Q15238 335 aa14.95□□□□□ -0.02
CCDC50-202ENST00000392456 RPEQ96AT9 228 aa14.95□□□□□ -0.02
CCDC50-202ENST00000392456 HECTD1Q9ULT8 2610 aa14.95□□□□□ -0.02
CCDC50-202ENST00000392456 IGLV2-23P01705 113 aa14.95□□□□□ -0.02
CCDC50-202ENST00000392456 IGLV2-8P01709 118 aa14.95□□□□□ -0.02
CCDC50-202ENST00000392456 CD24P25063 80 aa14.95□□□□□ -0.02
CCDC50-202ENST00000392456 GCHFRP30047 84 aa14.95□□□□□ -0.02
CCDC50-202ENST00000392456 TM4SF20Q53R12 229 aa14.95□□□□□ -0.02
CCDC50-202ENST00000392456 DYNAPQ8N1N2 210 aa14.95□□□□□ -0.02
CCDC50-202ENST00000392456 OR4C13Q8NGP0 309 aa14.95□□□□□ -0.02
CCDC50-202ENST00000392456 PSMG3-AS1Q96PY0 264 aa14.95□□□□□ -0.02
CCDC50-202ENST00000392456 TPSG1Q9NRR2 321 aa14.95□□□□□ -0.02
CCDC50-202ENST00000392456 FAM90A9PA6NNJ1 464 aa14.94□□□□□ -0.02
CCDC50-202ENST00000392456 C15orf61A6NNL5 157 aa14.94□□□□□ -0.02
CCDC50-202ENST00000392456 SRD5A1P18405 259 aa14.94□□□□□ -0.02
CCDC50-202ENST00000392456 NDUFV3P56181 108 aaKnown RBP14.94□□□□□ -0.02
CCDC50-202ENST00000392456 NHLRC2Q8NBF2 726 aa14.94□□□□□ -0.02
CCDC50-202ENST00000392456 TMEM14BQ9NUH8 114 aa14.94□□□□□ -0.02
CCDC50-202ENST00000392456 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.94□□□□□ -0.023e-6■■■■□ 19.5
CCDC50-202ENST00000392456 CSPG4Q6UVK1 2322 aa14.94□□□□□ -0.02
CCDC50-202ENST00000392456 A0A1W2PPI3 338 aa14.94□□□□□ -0.02
CCDC50-202ENST00000392456 IGLL5B9A064 214 aa14.94□□□□□ -0.02
CCDC50-202ENST00000392456 NCR2O95944 276 aa14.94□□□□□ -0.02
CCDC50-202ENST00000392456 PDPNQ86YL7 162 aa14.94□□□□□ -0.02
CCDC50-202ENST00000392456 RHODO00212 210 aa14.93□□□□□ -0.02
CCDC50-202ENST00000392456 UPK2O00526 184 aa14.93□□□□□ -0.02
CCDC50-202ENST00000392456 NUP35Q8NFH5 326 aa14.93□□□□□ -0.02
CCDC50-202ENST00000392456 DPM3Q9P2X0 92 aa14.93□□□□□ -0.02
CCDC50-202ENST00000392456 TCF19Q9Y242 345 aa14.93□□□□□ -0.02
CCDC50-202ENST00000392456 WDR83OSQ9Y284 106 aa14.93□□□□□ -0.02
CCDC50-202ENST00000392456 UNC79Q9P2D8 2635 aa14.93□□□□□ -0.02
CCDC50-202ENST00000392456 NAV3Q8IVL0 2385 aa14.93□□□□□ -0.02
CCDC50-202ENST00000392456 E7EUB6 86 aa14.93□□□□□ -0.02
CCDC50-202ENST00000392456 TIMM23O14925 209 aa14.93□□□□□ -0.02
CCDC50-202ENST00000392456 DAZAP1Q96EP5 407 aaKnown RBP14.93□□□□□ -0.02
CCDC50-202ENST00000392456 SPANXA1Q9NS26 97 aa14.93□□□□□ -0.02
CCDC50-202ENST00000392456 GCSHP23434 173 aa14.92□□□□□ -0.02
CCDC50-202ENST00000392456 AMTNQ6UX39 209 aa14.92□□□□□ -0.02
CCDC50-202ENST00000392456 TEX50A0A1B0GTY4 177 aa14.92□□□□□ -0.02
CCDC50-202ENST00000392456 MRGPRG-AS1Q2M3A8 158 aa14.92□□□□□ -0.02
CCDC50-202ENST00000392456 NFE4Q86UQ8 179 aa14.92□□□□□ -0.02
CCDC50-202ENST00000392456 BCL6BQ8N143 479 aaPredicted RBP14.92□□□□□ -0.02
CCDC50-202ENST00000392456 FOXA2Q9Y261 457 aaPredicted RBP14.92□□□□□ -0.02
CCDC50-202ENST00000392456 PPIFP30405 207 aaKnown RBP14.91□□□□□ -0.02
CCDC50-202ENST00000392456 FOXA3P55318 350 aaPredicted RBP14.91□□□□□ -0.02
CCDC50-202ENST00000392456 MAPK1IP1LQ8NDC0 245 aa14.91□□□□□ -0.02
CCDC50-202ENST00000392456 AMMECR1Q9Y4X0 333 aaPredicted RBP14.91□□□□□ -0.02
CCDC50-202ENST00000392456 CREBBPQ92793 2442 aa14.91□□□□□ -0.02
CCDC50-202ENST00000392456 C10orf55Q5SWW7 151 aa14.91□□□□□ -0.02
CCDC50-202ENST00000392456 A0A1B0GXF2 115 aa14.9□□□□□ -0.02
CCDC50-202ENST00000392456 CAMPP49913 170 aa14.9□□□□□ -0.02
CCDC50-202ENST00000392456 HSPE1P61604 102 aaKnown RBP14.9□□□□□ -0.02
CCDC50-202ENST00000392456 PIP4P2Q8N4L2 257 aa14.9□□□□□ -0.02
CCDC50-202ENST00000392456 C15orf62A8K5M9 175 aa14.9□□□□□ -0.02
CCDC50-202ENST00000392456 FNDC10F2Z333 226 aa14.9□□□□□ -0.02
CCDC50-202ENST00000392456 AJUBAQ96IF1 538 aa14.9□□□□□ -0.02
CCDC50-202ENST00000392456 ZNF747Q9BV97 191 aa14.9□□□□□ -0.02
CCDC50-202ENST00000392456 TGFAP01135 160 aa14.89□□□□□ -0.03
CCDC50-202ENST00000392456 SLC25A5P05141 298 aaKnown RBP14.89□□□□□ -0.03
CCDC50-202ENST00000392456 CFHR4Q92496 578 aa14.89□□□□□ -0.03
CCDC50-202ENST00000392456 HEYLQ9NQ87 328 aaPredicted RBP14.89□□□□□ -0.03
CCDC50-202ENST00000392456 PRRC2AP48634 2157 aaKnown RBP14.89□□□□□ -0.03
CCDC50-202ENST00000392456 IGHV3OR16-10A0A075B7F0 116 aa14.89□□□□□ -0.03
CCDC50-202ENST00000392456 ATP5L2Q7Z4Y8 100 aa14.89□□□□□ -0.03
CCDC50-202ENST00000392456 F11RQ9Y624 299 aaKnown RBP14.89□□□□□ -0.03
CCDC50-202ENST00000392456 TEX15Q9BXT5 2789 aa14.89□□□□□ -0.03
CCDC50-202ENST00000392456 SMIM9A6NGZ8 99 aa14.88□□□□□ -0.03
CCDC50-202ENST00000392456 PAX8Q06710 450 aa14.88□□□□□ -0.03
CCDC50-202ENST00000392456 PCP2Q8IVA1 136 aa14.88□□□□□ -0.03
CCDC50-202ENST00000392456 IGF2BP2-AS1Q96M15 143 aa14.88□□□□□ -0.03
CCDC50-202ENST00000392456 PRNDQ9UKY0 176 aa14.88□□□□□ -0.03
CCDC50-202ENST00000392456 TRBV20-1A0A075B6N2 111 aa14.88□□□□□ -0.03
CCDC50-202ENST00000392456 A0A096LNT2 108 aa14.88□□□□□ -0.03
CCDC50-202ENST00000392456 TRAV5A0A0B4J249 113 aa14.88□□□□□ -0.03
CCDC50-202ENST00000392456 CGB1A6NKQ9 187 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms