RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 C10orf111Q8N326 155 aa0.85□□□□□ -2.27
TRAJ39-201ENST00000390498 OTOSQ8NHW6 89 aa0.85□□□□□ -2.27
TRAJ39-201ENST00000390498 SPACA4Q8TDM5 124 aa0.85□□□□□ -2.27
TRAJ39-201ENST00000390498 ZNF431Q8TF32 576 aaPredicted RBP0.85□□□□□ -2.27
TRAJ39-201ENST00000390498 C4orf3Q8WVX3 66 aa0.85□□□□□ -2.27
TRAJ39-201ENST00000390498 ERBINQ96RT1 1412 aa0.85□□□□□ -2.27
TRAJ39-201ENST00000390498 CDK5RAP2Q96SN8 1893 aa0.85□□□□□ -2.27
TRAJ39-201ENST00000390498 SDF2Q99470 211 aa0.85□□□□□ -2.27
TRAJ39-201ENST00000390498 NABP2Q9BQ15 211 aa0.85□□□□□ -2.27
TRAJ39-201ENST00000390498 CST11Q9H112 138 aa0.85□□□□□ -2.27
TRAJ39-201ENST00000390498 FKBP11Q9NYL4 201 aa0.85□□□□□ -2.27
TRAJ39-201ENST00000390498 GNG8Q9UK08 70 aa0.85□□□□□ -2.27
TRAJ39-201ENST00000390498 MPC1Q9Y5U8 109 aa0.85□□□□□ -2.27
TRAJ39-201ENST00000390498 MBD5Q9P267 1494 aa0.85□□□□□ -2.27
TRAJ39-201ENST00000390498 MRC2Q9UBG0 1479 aa0.85□□□□□ -2.27
TRAJ39-201ENST00000390498 PTPRBP23467 1997 aa0.85□□□□□ -2.27
TRAJ39-201ENST00000390498 SCN8AQ9UQD0 1980 aa0.85□□□□□ -2.27
TRAJ39-201ENST00000390498 COL4A5P29400 1685 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 PRRC2AP48634 2157 aaKnown RBP0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 PLXNA3P51805 1871 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 ADGRB1O14514 1584 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 TRAV14DV4A0A0A6YYC5 116 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 A0A0G2JMM0 328 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 A0A1W2PPB8 328 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 C9orf170A2RU37 121 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 A6NN06 94 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 BBIP1A8MTZ0 92 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 KIR3DP1A8MWS1 328 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 ATP6V1G2-DDX39BF2Z307 99 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 F6UZH7 168 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 M0R2P5 195 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 PYYP10082 97 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 CXCL8P10145 99 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 KRTAP10-5P60370 271 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 BTG2P78543 158 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 OCIAD2Q56VL3 154 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 C1orf137Q5JT78 98 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 CLLU1Q5K131 121 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 LINC01545Q5VT33 79 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 KRTAP26-1Q6PEX3 210 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 CASC2Q6XLA1 102 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 ZNF833PQ6ZTB9 187 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 Q8N2B8 174 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 TCTEX1D1Q8N7M0 179 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 COPS9Q8WXC6 57 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 CIB3Q96Q77 187 aaPredicted RBP0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 C12orf57Q99622 126 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 TXNDC17Q9BRA2 123 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 PDCD10Q9BUL8 212 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 SNRNP25Q9BV90 132 aaKnown RBP0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 TTTY12Q9BZ98 90 aa0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 LSM2Q9Y333 95 aaKnown RBP0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 CHCHD2Q9Y6H1 151 aaPredicted RBP0.84□□□□□ -2.27
TRAJ39-201ENST00000390498 SHROOM3Q8TF72 1996 aa0.84□□□□□ -2.28
TRAJ39-201ENST00000390498 PXDNLA1KZ92 1463 aa0.84□□□□□ -2.28
TRAJ39-201ENST00000390498 LTBP2Q14767 1821 aa0.84□□□□□ -2.28
TRAJ39-201ENST00000390498 FOCADQ5VW36 1801 aa0.84□□□□□ -2.28
TRAJ39-201ENST00000390498 CACNA1DQ01668 2161 aa0.84□□□□□ -2.28
TRAJ39-201ENST00000390498 ADGRB3O60242 1522 aa0.84□□□□□ -2.28
TRAJ39-201ENST00000390498 COL24A1Q17RW2 1714 aa0.84□□□□□ -2.28
TRAJ39-201ENST00000390498 ANAPC1Q9H1A4 1944 aa0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 LAMB2P55268 1798 aa0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 TRAV12-2A0A075B6T6 113 aa0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 IGHV1-24A0A0C4DH33 117 aa0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 C3orf85A0A1B0GTC6 90 aa0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 ZNF736B4DX44 427 aaPredicted RBP0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 CORTO00230 105 aa0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 EDF1O60869 148 aaKnown RBP0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 HYPMO75409 117 aa0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 SMIM6P0DI80 62 aa0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 KRTAP12-2P59991 146 aa0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 KRTAP10-6P60371 365 aaPredicted RBP0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 CNBPP62633 177 aaKnown RBP0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 KRTAP13-3Q3SY46 172 aa0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 LCE3EQ5T5B0 92 aa0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 ATP11AUNQ6ZP68 121 aa0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 IDO2Q6ZQW0 420 aa0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 Q6ZUT4 128 aa0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 CLECL1Q8IZS7 167 aa0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 FAM19A2Q8N3H0 131 aa0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 KCNRGQ8N5I3 272 aa0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 OR10AG1Q8NH19 301 aa0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 ATP6V0E2Q8NHE4 81 aa0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 Q8TAT8 98 aa0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 DPH3Q96FX2 82 aa0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 SMIM7Q9BQ49 75 aa0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 NAA38Q9BRA0 125 aaKnown RBP0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 PSMG3Q9BT73 122 aaPredicted RBP0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 RERGLQ9H628 205 aa0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 PRO0461Q9UI25 63 aa0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 CCNB3Q8WWL7 1395 aa0.83□□□□□ -2.28
TRAJ39-201ENST00000390498 COL11A1P12107 1806 aaPredicted RBP0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 TRAV2A0A0B4J234 112 aa0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 LOC107984156A0A0G2JMH3 177 aa0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 J3QLW9 94 aa0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 CD2P06729 351 aa0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 AKAIN1P0CW23 69 aa0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 COX7CP15954 63 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms