RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 RP1L1Q8IWN7 2480 aaPredicted RBP4.13□□□□□ -1.75
TRAV35-201ENST00000390462 APCP25054 2843 aa4.13□□□□□ -1.75
TRAV35-201ENST00000390462 DSCAMO60469 2012 aa4.12□□□□□ -1.75
TRAV35-201ENST00000390462 IGKV1-9A0A0C4DH69 117 aa4.12□□□□□ -1.75
TRAV35-201ENST00000390462 GRIFINA4D1Z8 144 aa4.12□□□□□ -1.75
TRAV35-201ENST00000390462 TMEM212A6NML5 194 aa4.12□□□□□ -1.75
TRAV35-201ENST00000390462 FAM25AB3EWG3 89 aa4.12□□□□□ -1.75
TRAV35-201ENST00000390462 FAM25CB3EWG5 89 aa4.12□□□□□ -1.75
TRAV35-201ENST00000390462 FAM25GB3EWG6 89 aa4.12□□□□□ -1.75
TRAV35-201ENST00000390462 TMEM256-PLSCR3K7ERE1 68 aa4.12□□□□□ -1.75
TRAV35-201ENST00000390462 K7ERU9 68 aa4.12□□□□□ -1.75
TRAV35-201ENST00000390462 IGF2P01344 180 aa4.12□□□□□ -1.75
TRAV35-201ENST00000390462 LGALS3P17931 250 aaKnown RBP4.12□□□□□ -1.75
TRAV35-201ENST00000390462 SRP14P37108 136 aaKnown RBP4.12□□□□□ -1.75
TRAV35-201ENST00000390462 NCS1P62166 190 aa4.12□□□□□ -1.75
TRAV35-201ENST00000390462 AKR1C1Q04828 323 aa4.12□□□□□ -1.75
TRAV35-201ENST00000390462 NEDD8Q15843 81 aa4.12□□□□□ -1.75
TRAV35-201ENST00000390462 ZFP2Q6ZN57 461 aa4.12□□□□□ -1.75
TRAV35-201ENST00000390462 Q6ZR54 194 aa4.12□□□□□ -1.75
TRAV35-201ENST00000390462 IFT20Q8IY31 132 aa4.12□□□□□ -1.75
TRAV35-201ENST00000390462 RNF175Q8N4F7 328 aa4.12□□□□□ -1.75
TRAV35-201ENST00000390462 OR8D4Q8NGM9 314 aa4.12□□□□□ -1.75
TRAV35-201ENST00000390462 PRADC1Q9BSG0 188 aa4.12□□□□□ -1.75
TRAV35-201ENST00000390462 ESPL1Q14674 2120 aa4.12□□□□□ -1.75
TRAV35-201ENST00000390462 SHANK1Q9Y566 2161 aa4.12□□□□□ -1.75
TRAV35-201ENST00000390462 A0A087X0T9 212 aa4.11□□□□□ -1.75
TRAV35-201ENST00000390462 ODAMA1E959 279 aa4.11□□□□□ -1.75
TRAV35-201ENST00000390462 C19orf71A6NCJ1 209 aa4.11□□□□□ -1.75
TRAV35-201ENST00000390462 PANO1I0J062 215 aa4.11□□□□□ -1.75
TRAV35-201ENST00000390462 UBE2BP63146 152 aa4.11□□□□□ -1.75
TRAV35-201ENST00000390462 EIF5AP63241 154 aaKnown RBP4.11□□□□□ -1.75
TRAV35-201ENST00000390462 SELENOWP63302 87 aa4.11□□□□□ -1.75
TRAV35-201ENST00000390462 EMX2Q04743 252 aa4.11□□□□□ -1.75
TRAV35-201ENST00000390462 FUT5Q11128 374 aa4.11□□□□□ -1.75
TRAV35-201ENST00000390462 HNRNPA0Q13151 305 aaKnown RBP4.11□□□□□ -1.75
TRAV35-201ENST00000390462 RPRMLQ8N4K4 120 aa4.11□□□□□ -1.75
TRAV35-201ENST00000390462 BPIFB6Q8NFQ5 453 aa4.11□□□□□ -1.75
TRAV35-201ENST00000390462 OR51A4Q8NGJ6 313 aa4.11□□□□□ -1.75
TRAV35-201ENST00000390462 TERB2Q8NHR7 220 aa4.11□□□□□ -1.75
TRAV35-201ENST00000390462 CLDND2Q8NHS1 167 aa4.11□□□□□ -1.75
TRAV35-201ENST00000390462 UBALD1Q8TB05 177 aa4.11□□□□□ -1.75
TRAV35-201ENST00000390462 WFDC5Q8TCV5 224 aa4.11□□□□□ -1.75
TRAV35-201ENST00000390462 ARL11Q969Q4 196 aa4.11□□□□□ -1.75
TRAV35-201ENST00000390462 ZC2HC1AQ96GY0 325 aa4.11□□□□□ -1.75
TRAV35-201ENST00000390462 TP53RKQ96S44 253 aa4.11□□□□□ -1.75
TRAV35-201ENST00000390462 OR5AC2Q9NZP5 309 aa4.11□□□□□ -1.75
TRAV35-201ENST00000390462 ABCA2Q9BZC7 2435 aa4.1□□□□□ -1.75
TRAV35-201ENST00000390462 IGLV4-69A0A075B6H9 119 aa4.1□□□□□ -1.75
TRAV35-201ENST00000390462 LOC107984640A0A0U1RRK4 108 aa4.1□□□□□ -1.75
TRAV35-201ENST00000390462 A0A1W2PNU3 283 aaPredicted RBP4.1□□□□□ -1.75
TRAV35-201ENST00000390462 CST7O76096 145 aa4.1□□□□□ -1.75
TRAV35-201ENST00000390462 NPYP01303 97 aa4.1□□□□□ -1.75
TRAV35-201ENST00000390462 SDC2P34741 201 aa4.1□□□□□ -1.75
TRAV35-201ENST00000390462 ZNF79Q15937 498 aa4.1□□□□□ -1.75
TRAV35-201ENST00000390462 GLYATL3Q5SZD4 288 aa4.1□□□□□ -1.75
TRAV35-201ENST00000390462 LDLRAD2Q5SZI1 272 aa4.1□□□□□ -1.75
TRAV35-201ENST00000390462 Q6ZQT7 251 aa4.1□□□□□ -1.75
TRAV35-201ENST00000390462 AP1S3Q96PC3 154 aa4.1□□□□□ -1.75
TRAV35-201ENST00000390462 TCEAL7Q9BRU2 100 aa4.1□□□□□ -1.75
TRAV35-201ENST00000390462 LINC00470Q9BZP3 86 aa4.1□□□□□ -1.75
TRAV35-201ENST00000390462 TCEAL2Q9H3H9 227 aaPredicted RBP4.1□□□□□ -1.75
TRAV35-201ENST00000390462 NAT8Q9UHE5 227 aa4.1□□□□□ -1.75
TRAV35-201ENST00000390462 RNF11Q9Y3C5 154 aa4.1□□□□□ -1.75
TRAV35-201ENST00000390462 CCDC168Q8NDH2 2452 aa4.09□□□□□ -1.75
TRAV35-201ENST00000390462 ANKHD1Q8IWZ3 2542 aaKnown RBP4.09□□□□□ -1.75
TRAV35-201ENST00000390462 IGKV1D-37A0A075B6S9 117 aa4.09□□□□□ -1.75
TRAV35-201ENST00000390462 H3BQ85 93 aa4.09□□□□□ -1.75
TRAV35-201ENST00000390462 LY6LH3BQJ8 138 aa4.09□□□□□ -1.75
TRAV35-201ENST00000390462 C19orf84I3L1E1 186 aa4.09□□□□□ -1.75
TRAV35-201ENST00000390462 GNG7O60262 68 aa4.09□□□□□ -1.75
TRAV35-201ENST00000390462 IGLV3-19P01714 112 aa4.09□□□□□ -1.75
TRAV35-201ENST00000390462 IGHV3-7P01780 117 aa4.09□□□□□ -1.75
TRAV35-201ENST00000390462 IGLV7-43P04211 117 aa4.09□□□□□ -1.75
TRAV35-201ENST00000390462 CISD3P0C7P0 127 aa4.09□□□□□ -1.75
TRAV35-201ENST00000390462 CXCL8P10145 99 aa4.09□□□□□ -1.75
TRAV35-201ENST00000390462 ZNF25P17030 456 aaPredicted RBP4.09□□□□□ -1.75
TRAV35-201ENST00000390462 NDUFA6P56556 154 aa4.09□□□□□ -1.75
TRAV35-201ENST00000390462 RHOGP84095 191 aa4.09□□□□□ -1.75
TRAV35-201ENST00000390462 ZNF816Q0VGE8 651 aaPredicted RBP4.09□□□□□ -1.75
TRAV35-201ENST00000390462 ZNF705AQ6ZN79 300 aaPredicted RBP4.09□□□□□ -1.75
TRAV35-201ENST00000390462 BPIFA4PQ86YQ2 179 aa4.09□□□□□ -1.75
TRAV35-201ENST00000390462 MSRB3Q8IXL7 192 aa4.09□□□□□ -1.75
TRAV35-201ENST00000390462 TMEM106AQ96A25 262 aa4.09□□□□□ -1.75
TRAV35-201ENST00000390462 ZNF471Q9BX82 626 aaPredicted RBP4.09□□□□□ -1.75
TRAV35-201ENST00000390462 MRPL32Q9BYC8 188 aaKnown RBP4.09□□□□□ -1.75
TRAV35-201ENST00000390462 SMDT1Q9H4I9 107 aa4.09□□□□□ -1.75
TRAV35-201ENST00000390462 C16orf95Q9H693 158 aa4.09□□□□□ -1.75
TRAV35-201ENST00000390462 TRBV7-6A0A0J9YX20 115 aa4.08□□□□□ -1.76
TRAV35-201ENST00000390462 FAM92AA1XBS5 289 aa4.08□□□□□ -1.76
TRAV35-201ENST00000390462 MT-ND4LP03901 98 aa4.08□□□□□ -1.76
TRAV35-201ENST00000390462 CXCL1P09341 107 aa4.08□□□□□ -1.76
TRAV35-201ENST00000390462 RNASE4P34096 147 aaKnown RBP4.08□□□□□ -1.76
TRAV35-201ENST00000390462 RPS25P62851 125 aaKnown RBP4.08□□□□□ -1.76
TRAV35-201ENST00000390462 BIKQ13323 160 aa4.08□□□□□ -1.76
TRAV35-201ENST00000390462 MSMO1Q15800 293 aa4.08□□□□□ -1.76
TRAV35-201ENST00000390462 MIR17HGQ75NE6 70 aa4.08□□□□□ -1.76
TRAV35-201ENST00000390462 ZNF695Q8IW36 515 aa4.08□□□□□ -1.76
TRAV35-201ENST00000390462 HIST3H2BBQ8N257 126 aa4.08□□□□□ -1.76
TRAV35-201ENST00000390462 TNRC6AQ8NDV7 1962 aaKnown RBP4.08□□□□□ -1.76
TRAV35-201ENST00000390462 MUC7Q8TAX7 377 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms