RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 MZT2BQ6NZ67 158 aa11.97□□□□□ -0.49
HMGN1-204ENST00000380749 Q6ZTI0 123 aa11.97□□□□□ -0.49
HMGN1-204ENST00000380749 LINC00477Q96M19 166 aa11.97□□□□□ -0.49
HMGN1-204ENST00000380749 UPK3BQ9BT76 320 aa11.97□□□□□ -0.49
HMGN1-204ENST00000380749 NPCDR1Q9BY65 106 aa11.97□□□□□ -0.49
HMGN1-204ENST00000380749 TRGV2A0A075B6R0 118 aa11.96□□□□□ -0.49
HMGN1-204ENST00000380749 KLLNB2CW77 178 aa11.96□□□□□ -0.49
HMGN1-204ENST00000380749 PYYP10082 97 aa11.96□□□□□ -0.49
HMGN1-204ENST00000380749 ERCC8Q13216 396 aa11.96□□□□□ -0.49
HMGN1-204ENST00000380749 IL15RAQ13261 267 aa11.96□□□□□ -0.49
HMGN1-204ENST00000380749 BLNKQ8WV28 456 aa11.96□□□□□ -0.49
HMGN1-204ENST00000380749 Q9H3A6 140 aa11.96□□□□□ -0.49
HMGN1-204ENST00000380749 NDUFB4O95168 129 aa11.95□□□□□ -0.5
HMGN1-204ENST00000380749 BTN1A1Q13410 526 aa11.95□□□□□ -0.5
HMGN1-204ENST00000380749 EIF4E3Q8N5X7 224 aaKnown RBP11.95□□□□□ -0.5
HMGN1-204ENST00000380749 LINC00467Q9BRT7 94 aa11.95□□□□□ -0.5
HMGN1-204ENST00000380749 GSN-AS1Q9NRJ2 163 aa11.95□□□□□ -0.5
HMGN1-204ENST00000380749 KCNIP2Q9NS61 270 aa11.95□□□□□ -0.5
HMGN1-204ENST00000380749 MRPS16Q9Y3D3 137 aaKnown RBP11.95□□□□□ -0.5
HMGN1-204ENST00000380749 TRGV1A0A0A0MS02 117 aa11.94□□□□□ -0.5
HMGN1-204ENST00000380749 A0A1W2PPQ1 181 aa11.94□□□□□ -0.5
HMGN1-204ENST00000380749 TMEM78Q5T7P6 136 aa11.94□□□□□ -0.5
HMGN1-204ENST00000380749 FAM19A4Q96LR4 140 aa11.94□□□□□ -0.5
HMGN1-204ENST00000380749 C18orf15Q96N68 181 aa11.94□□□□□ -0.5
HMGN1-204ENST00000380749 CDK2AP2O75956 126 aa11.93□□□□□ -0.5
HMGN1-204ENST00000380749 GPX1P07203 203 aa11.93□□□□□ -0.5
HMGN1-204ENST00000380749 CRISP2P16562 243 aa11.93□□□□□ -0.5
HMGN1-204ENST00000380749 RNASE4P34096 147 aaKnown RBP11.93□□□□□ -0.5
HMGN1-204ENST00000380749 ICAM4Q14773 271 aa11.93□□□□□ -0.5
HMGN1-204ENST00000380749 ESRGQ1W209 222 aa11.93□□□□□ -0.5
HMGN1-204ENST00000380749 ANXA2RQ3ZCQ2 193 aa11.93□□□□□ -0.5
HMGN1-204ENST00000380749 GCSAMLQ5JQS6 135 aa11.93□□□□□ -0.5
HMGN1-204ENST00000380749 C9orf47Q6ZRZ4 202 aa11.93□□□□□ -0.5
HMGN1-204ENST00000380749 EXOC3-AS1Q8N2X6 119 aa11.93□□□□□ -0.5
HMGN1-204ENST00000380749 C11orf72Q8NBR9 251 aa11.93□□□□□ -0.5
HMGN1-204ENST00000380749 OR5C1Q8NGR4 320 aa11.93□□□□□ -0.5
HMGN1-204ENST00000380749 THAP6Q8TBB0 222 aa11.93□□□□□ -0.5
HMGN1-204ENST00000380749 SLC25A2Q9BXI2 301 aa11.93□□□□□ -0.5
HMGN1-204ENST00000380749 KRTAP1-5Q9BYS1 174 aa11.93□□□□□ -0.5
HMGN1-204ENST00000380749 SLC25A31Q9H0C2 315 aa11.93□□□□□ -0.5
HMGN1-204ENST00000380749 FUT9Q9Y231 359 aa11.93□□□□□ -0.5
HMGN1-204ENST00000380749 ZNF324O75467 553 aaPredicted RBP11.92□□□□□ -0.5
HMGN1-204ENST00000380749 NMBP08949 121 aa11.92□□□□□ -0.5
HMGN1-204ENST00000380749 CD300CQ08708 224 aa11.92□□□□□ -0.5
HMGN1-204ENST00000380749 ASAH1Q13510 395 aa11.92□□□□□ -0.5
HMGN1-204ENST00000380749 ENKURQ8TC29 256 aa11.92□□□□□ -0.5
HMGN1-204ENST00000380749 AGPAT4-IT1Q9H0P7 198 aa11.92□□□□□ -0.5
HMGN1-204ENST00000380749 IGKV2-40A0A087WW87 121 aaPredicted RBP11.92□□□□□ -0.5
HMGN1-204ENST00000380749 E5RGE8 158 aa11.92□□□□□ -0.5
HMGN1-204ENST00000380749 RGS13O14921 159 aa11.92□□□□□ -0.5
HMGN1-204ENST00000380749 IGKV2D-40P01614 121 aaPredicted RBP11.92□□□□□ -0.5
HMGN1-204ENST00000380749 BTF3P20290 206 aaKnown RBP11.92□□□□□ -0.5
HMGN1-204ENST00000380749 TCL1AP56279 114 aa11.92□□□□□ -0.5
HMGN1-204ENST00000380749 NHLH2Q02577 135 aa11.92□□□□□ -0.5
HMGN1-204ENST00000380749 IBA57Q5T440 356 aaKnown RBP11.92□□□□□ -0.5
HMGN1-204ENST00000380749 FAM122CQ6P4D5 195 aa11.92□□□□□ -0.5
HMGN1-204ENST00000380749 LINC00299Q6ZSB3 139 aa11.92□□□□□ -0.5
HMGN1-204ENST00000380749 MIR17HGQ75NE6 70 aa11.92□□□□□ -0.5
HMGN1-204ENST00000380749 S100ZQ8WXG8 99 aa11.92□□□□□ -0.5
HMGN1-204ENST00000380749 ARPC5LQ9BPX5 153 aa11.92□□□□□ -0.5
HMGN1-204ENST00000380749 MRPL32Q9BYC8 188 aaKnown RBP11.92□□□□□ -0.5
HMGN1-204ENST00000380749 A0A096LPF7 62 aa11.91□□□□□ -0.5
HMGN1-204ENST00000380749 SPATA12Q7Z6I5 190 aa11.91□□□□□ -0.5
HMGN1-204ENST00000380749 VSIG2Q96IQ7 327 aa11.91□□□□□ -0.5
HMGN1-204ENST00000380749 FAM167A-AS1Q96KT0 104 aa11.91□□□□□ -0.5
HMGN1-204ENST00000380749 OR51M1Q9H341 326 aa11.91□□□□□ -0.5
HMGN1-204ENST00000380749 SPINK4O60575 86 aa11.9□□□□□ -0.5
HMGN1-204ENST00000380749 NBEAP1P0C6P0 100 aa11.9□□□□□ -0.5
HMGN1-204ENST00000380749 LRRC37A5PQ49AS3 106 aa11.9□□□□□ -0.5
HMGN1-204ENST00000380749 ZFAND2AQ8N6M9 145 aa11.9□□□□□ -0.5
HMGN1-204ENST00000380749 ST6GAL2Q96JF0 529 aa11.9□□□□□ -0.5
HMGN1-204ENST00000380749 PAXXQ9BUH6 204 aa11.9□□□□□ -0.5
HMGN1-204ENST00000380749 NMES1Q9C002 83 aa11.9□□□□□ -0.5
HMGN1-204ENST00000380749 IGHV1OR15-1A0A075B7D0 117 aa11.89□□□□□ -0.51
HMGN1-204ENST00000380749 C17orf112F2Z3M2 114 aa11.89□□□□□ -0.51
HMGN1-204ENST00000380749 VGLL1Q99990 258 aa11.89□□□□□ -0.51
HMGN1-204ENST00000380749 OR5AC2Q9NZP5 309 aa11.89□□□□□ -0.51
HMGN1-204ENST00000380749 ZNF492Q9P255 531 aa11.89□□□□□ -0.51
HMGN1-204ENST00000380749 KLF12Q9Y4X4 402 aa11.89□□□□□ -0.51
HMGN1-204ENST00000380749 ICOSQ9Y6W8 199 aa11.89□□□□□ -0.51
HMGN1-204ENST00000380749 TRBV7-9A0A0J9YWB2 115 aa11.88□□□□□ -0.51
HMGN1-204ENST00000380749 OR7C2O60412 319 aa11.88□□□□□ -0.51
HMGN1-204ENST00000380749 SIX6O95475 246 aa11.88□□□□□ -0.51
HMGN1-204ENST00000380749 OR10J4P0C629 311 aa11.88□□□□□ -0.51
HMGN1-204ENST00000380749 CSN1S1P47710 185 aa11.88□□□□□ -0.51
HMGN1-204ENST00000380749 ZNF138P52744 262 aa11.88□□□□□ -0.51
HMGN1-204ENST00000380749 CYCSP99999 105 aaKnown RBP11.88□□□□□ -0.51
HMGN1-204ENST00000380749 ZNF415Q09FC8 603 aa11.88□□□□□ -0.51
HMGN1-204ENST00000380749 PRR9Q5T870 116 aa11.88□□□□□ -0.51
HMGN1-204ENST00000380749 MAPKAPK5-AS1Q8N8E1 139 aa11.88□□□□□ -0.51
HMGN1-204ENST00000380749 FXYD5Q96DB9 178 aa11.88□□□□□ -0.51
HMGN1-204ENST00000380749 PHYHIPLQ96FC7 376 aa11.88□□□□□ -0.51
HMGN1-204ENST00000380749 WDR61Q9GZS3 305 aaKnown RBP11.88□□□□□ -0.51
HMGN1-204ENST00000380749 PAX4O43316 350 aa11.87□□□□□ -0.51
HMGN1-204ENST00000380749 PRAF2O60831 178 aa11.87□□□□□ -0.51
HMGN1-204ENST00000380749 Q8TAT8 98 aa11.87□□□□□ -0.51
HMGN1-204ENST00000380749 KRTAP4-5Q9BYR2 181 aa11.87□□□□□ -0.51
HMGN1-204ENST00000380749 MRPL16Q9NX20 251 aaKnown RBP11.87□□□□□ -0.51
HMGN1-204ENST00000380749 TP53TG3Q9ULZ0 132 aa11.87□□□□□ -0.51
HMGN1-204ENST00000380749 SIVA1O15304 175 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms