RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 SHANK2-AS3Q9BTD1 123 aa13.01□□□□□ -0.33
PCDHA1-201ENST00000378133 NDUFS7O75251 213 aa13.01□□□□□ -0.33
PCDHA1-201ENST00000378133 SIGLEC15Q6ZMC9 328 aa13.01□□□□□ -0.33
PCDHA1-201ENST00000378133 ZNF491Q8N8L2 437 aa13.01□□□□□ -0.33
PCDHA1-201ENST00000378133 ANKHD1Q8IWZ3 2542 aaKnown RBP13□□□□□ -0.33
PCDHA1-201ENST00000378133 SPTA1P02549 2419 aa13□□□□□ -0.33
PCDHA1-201ENST00000378133 TMEM189A5PLL7 270 aa13□□□□□ -0.33
PCDHA1-201ENST00000378133 LY6HO94772 140 aa13□□□□□ -0.33
PCDHA1-201ENST00000378133 IL4P05112 153 aa13□□□□□ -0.33
PCDHA1-201ENST00000378133 FCGR2BP31994 310 aaPredicted RBP13□□□□□ -0.33
PCDHA1-201ENST00000378133 PAX8Q06710 450 aa13□□□□□ -0.33
PCDHA1-201ENST00000378133 BCL6BQ8N143 479 aaPredicted RBP13□□□□□ -0.33
PCDHA1-201ENST00000378133 TEX48A0A1B0GUV7 120 aa13□□□□□ -0.33
PCDHA1-201ENST00000378133 CKS2P33552 79 aa13□□□□□ -0.33
PCDHA1-201ENST00000378133 RNF5Q99942 180 aa13□□□□□ -0.33
PCDHA1-201ENST00000378133 NBASA2RRP1 2371 aa13□□□□□ -0.33
PCDHA1-201ENST00000378133 SMKR1H3BMG3 65 aa12.99□□□□□ -0.33
PCDHA1-201ENST00000378133 H3BRN7 92 aa12.99□□□□□ -0.33
PCDHA1-201ENST00000378133 M0R3E3 92 aa12.99□□□□□ -0.33
PCDHA1-201ENST00000378133 ZNF672Q499Z4 452 aaPredicted RBP12.99□□□□□ -0.33
PCDHA1-201ENST00000378133 SHISA2Q6UWI4 295 aa12.99□□□□□ -0.33
PCDHA1-201ENST00000378133 GRNP28799 593 aaKnown RBP12.99□□□□□ -0.33
PCDHA1-201ENST00000378133 RNF125Q96EQ8 232 aa12.99□□□□□ -0.33
PCDHA1-201ENST00000378133 FXYD2P54710 66 aa12.98□□□□□ -0.33
PCDHA1-201ENST00000378133 LYPD1Q8N2G4 141 aa12.98□□□□□ -0.33
PCDHA1-201ENST00000378133 C18orf15Q96N68 181 aa12.98□□□□□ -0.33
PCDHA1-201ENST00000378133 ZNF207O43670 478 aaKnown RBP12.98□□□□□ -0.33
PCDHA1-201ENST00000378133 NPYP01303 97 aa12.98□□□□□ -0.33
PCDHA1-201ENST00000378133 A0A1W2PRD5 423 aa12.97□□□□□ -0.33
PCDHA1-201ENST00000378133 A0A1W2PRF3 423 aa12.97□□□□□ -0.33
PCDHA1-201ENST00000378133 A0A1W2PRM7 423 aa12.97□□□□□ -0.33
PCDHA1-201ENST00000378133 FAM90A27PA6NNH2 459 aa12.97□□□□□ -0.33
PCDHA1-201ENST00000378133 NBR2O15453 112 aa12.97□□□□□ -0.33
PCDHA1-201ENST00000378133 VKORC1Q9BQB6 163 aa12.97□□□□□ -0.33
PCDHA1-201ENST00000378133 SRSF8Q9BRL6 282 aaKnown RBP12.97□□□□□ -0.33
PCDHA1-201ENST00000378133 CCDC144NLQ6NUI1 221 aa12.97□□□□□ -0.33
PCDHA1-201ENST00000378133 DPM3Q9P2X0 92 aa12.97□□□□□ -0.33
PCDHA1-201ENST00000378133 IGF2RP11717 2491 aa12.97□□□□□ -0.33
PCDHA1-201ENST00000378133 TWIST1Q15672 202 aa12.97□□□□□ -0.33
PCDHA1-201ENST00000378133 TMEM190Q8WZ59 177 aa12.97□□□□□ -0.33
PCDHA1-201ENST00000378133 TTTY13Q9BZ97 58 aa12.97□□□□□ -0.33
PCDHA1-201ENST00000378133 IGKV2D-26A0A0A0MRZ7 120 aa12.96□□□□□ -0.33
PCDHA1-201ENST00000378133 MRPS12O15235 138 aaKnown RBP12.96□□□□□ -0.33
PCDHA1-201ENST00000378133 KLRD1Q13241 179 aa12.96□□□□□ -0.33
PCDHA1-201ENST00000378133 HES1Q14469 280 aa12.96□□□□□ -0.33
PCDHA1-201ENST00000378133 VGLL1Q99990 258 aa12.96□□□□□ -0.33
PCDHA1-201ENST00000378133 PTPRQQ9UMZ3 2332 aa12.96□□□□□ -0.34
PCDHA1-201ENST00000378133 WI2-2373I1.2A0A1W2PRP0 233 aa12.96□□□□□ -0.34
PCDHA1-201ENST00000378133 FBLL1A6NHQ2 334 aaKnown RBP12.96□□□□□ -0.34
PCDHA1-201ENST00000378133 K7ERJ3 54 aa12.96□□□□□ -0.34
PCDHA1-201ENST00000378133 SH2D1AO60880 128 aa12.96□□□□□ -0.34
PCDHA1-201ENST00000378133 MED13LQ71F56 2210 aa12.96□□□□□ -0.34
PCDHA1-201ENST00000378133 WNK2Q9Y3S1 2297 aa12.95□□□□□ -0.34
PCDHA1-201ENST00000378133 LY6G5BQ8NDX9 201 aa12.95□□□□□ -0.34
PCDHA1-201ENST00000378133 CFHR4Q92496 578 aa12.95□□□□□ -0.34
PCDHA1-201ENST00000378133 HIGD1BQ9P298 99 aa12.95□□□□□ -0.34
PCDHA1-201ENST00000378133 TSSC4Q9Y5U2 329 aaPredicted RBP12.95□□□□□ -0.34
PCDHA1-201ENST00000378133 SVEP1Q4LDE5 3571 aa12.95□□□□□ -0.34
PCDHA1-201ENST00000378133 PIFOQ8TCI5 191 aa12.95□□□□□ -0.34
PCDHA1-201ENST00000378133 CHAC1Q9BUX1 264 aa12.95□□□□□ -0.34
PCDHA1-201ENST00000378133 GAGE12HA6NDE8 117 aa12.94□□□□□ -0.34
PCDHA1-201ENST00000378133 AAMDCQ9H7C9 122 aa12.94□□□□□ -0.34
PCDHA1-201ENST00000378133 HHLA3Q9XRX5 114 aa12.94□□□□□ -0.34
PCDHA1-201ENST00000378133 PRSS1P07477 247 aa12.93□□□□□ -0.34
PCDHA1-201ENST00000378133 ZNF479Q96JC4 524 aa12.93□□□□□ -0.34
PCDHA1-201ENST00000378133 FANCD2OSQ96PS1 177 aa12.93□□□□□ -0.34
PCDHA1-201ENST00000378133 NHP2Q9NX24 153 aaKnown RBP12.93□□□□□ -0.34
PCDHA1-201ENST00000378133 LEPP41159 167 aa12.93□□□□□ -0.34
PCDHA1-201ENST00000378133 PSMG4Q5JS54 123 aa12.93□□□□□ -0.34
PCDHA1-201ENST00000378133 ZNF562Q6V9R5 426 aa12.93□□□□□ -0.34
PCDHA1-201ENST00000378133 OR11H6Q8NGC7 330 aa12.93□□□□□ -0.34
PCDHA1-201ENST00000378133 GEMIN7Q9H840 131 aaKnown RBP12.93□□□□□ -0.34
PCDHA1-201ENST00000378133 NDUFA3O95167 84 aa12.92□□□□□ -0.34
PCDHA1-201ENST00000378133 IGHV3-23P01764 117 aa12.92□□□□□ -0.34
PCDHA1-201ENST00000378133 ODF1Q14990 250 aa12.92□□□□□ -0.34
PCDHA1-201ENST00000378133 C5orf64Q2M2E5 130 aa12.92□□□□□ -0.34
PCDHA1-201ENST00000378133 NPBQ8NG41 125 aa12.92□□□□□ -0.34
PCDHA1-201ENST00000378133 UCNP55089 124 aa12.92□□□□□ -0.34
PCDHA1-201ENST00000378133 CD300EQ496F6 205 aaPredicted RBP12.92□□□□□ -0.34
PCDHA1-201ENST00000378133 PHLDA1Q8WV24 401 aaPredicted RBP12.92□□□□□ -0.34
PCDHA1-201ENST00000378133 MAP1LC3AQ9H492 121 aa12.92□□□□□ -0.34
PCDHA1-201ENST00000378133 ZMAT4Q9H898 229 aa12.92□□□□□ -0.34
PCDHA1-201ENST00000378133 TRBV25-1A0A075B6N4 114 aa12.91□□□□□ -0.34
PCDHA1-201ENST00000378133 EGR2P11161 476 aaPredicted RBP12.91□□□□□ -0.34
PCDHA1-201ENST00000378133 MFAP4P55083 255 aa12.91□□□□□ -0.34
PCDHA1-201ENST00000378133 C1orf122Q6ZSJ8 110 aa12.91□□□□□ -0.34
PCDHA1-201ENST00000378133 NCBP2LA6PVI3 153 aaKnown RBP12.91□□□□□ -0.34
PCDHA1-201ENST00000378133 IGKCP01834 107 aa12.91□□□□□ -0.34
PCDHA1-201ENST00000378133 GTSCR1Q86UQ5 136 aa12.91□□□□□ -0.34
PCDHA1-201ENST00000378133 RAB1BQ9H0U4 201 aa12.91□□□□□ -0.34
PCDHA1-201ENST00000378133 PGPEP1Q9NXJ5 209 aa12.91□□□□□ -0.34
PCDHA1-201ENST00000378133 IGLV11-55A0A075B6I3 123 aa12.9□□□□□ -0.34
PCDHA1-201ENST00000378133 F8W735 103 aaPredicted RBP12.9□□□□□ -0.34
PCDHA1-201ENST00000378133 WFDC2Q14508 124 aa12.9□□□□□ -0.34
PCDHA1-201ENST00000378133 CEND1Q8N111 149 aa12.9□□□□□ -0.34
PCDHA1-201ENST00000378133 IGKV2-40A0A087WW87 121 aaPredicted RBP12.9□□□□□ -0.34
PCDHA1-201ENST00000378133 K7EMI3 77 aa12.9□□□□□ -0.34
PCDHA1-201ENST00000378133 IGKV2D-40P01614 121 aaPredicted RBP12.9□□□□□ -0.34
PCDHA1-201ENST00000378133 FCER1GP30273 86 aa12.9□□□□□ -0.34
PCDHA1-201ENST00000378133 NDPQ00604 133 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms