RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 HOXB4P17483 251 aaPredicted RBP10.08□□□□□ -0.8
USP11-204ENST00000377107 LY6G5BQ8NDX9 201 aa10.08□□□□□ -0.8
USP11-204ENST00000377107 SIGLEC8Q9NYZ4 499 aa10.08□□□□□ -0.8
USP11-204ENST00000377107 M0R1W7 72 aa10.08□□□□□ -0.8
USP11-204ENST00000377107 DEFB1P60022 68 aa10.08□□□□□ -0.8
USP11-204ENST00000377107 PRSS57Q6UWY2 283 aa10.08□□□□□ -0.8
USP11-204ENST00000377107 MRPL51Q4U2R6 128 aaKnown RBP10.07□□□□□ -0.8
USP11-204ENST00000377107 SAPCD1Q5SSQ6 148 aa10.07□□□□□ -0.8
USP11-204ENST00000377107 LCNL1Q6ZST4 164 aa10.07□□□□□ -0.8
USP11-204ENST00000377107 IL17RELQ6ZVW7 336 aa10.07□□□□□ -0.8
USP11-204ENST00000377107 RAB37Q96AX2 223 aa10.07□□□□□ -0.8
USP11-204ENST00000377107 WI2-2373I1.2A0A1W2PRP0 233 aa10.07□□□□□ -0.8
USP11-204ENST00000377107 NPYP01303 97 aa10.07□□□□□ -0.8
USP11-204ENST00000377107 GLMPQ8WWB7 406 aa10.07□□□□□ -0.8
USP11-204ENST00000377107 CCL25O15444 150 aa10.07□□□□□ -0.8
USP11-204ENST00000377107 GAS8-AS1O95177 125 aa10.07□□□□□ -0.8
USP11-204ENST00000377107 WFDC12Q8WWY7 111 aa10.07□□□□□ -0.8
USP11-204ENST00000377107 PKD1L2Q7Z442 2459 aa10.07□□□□□ -0.8
USP11-204ENST00000377107 NDUFA3O95167 84 aa10.06□□□□□ -0.8
USP11-204ENST00000377107 NPBQ8NG41 125 aa10.06□□□□□ -0.8
USP11-204ENST00000377107 KLK15Q9H2R5 256 aa10.06□□□□□ -0.8
USP11-204ENST00000377107 MSRB2Q9Y3D2 182 aa10.06□□□□□ -0.8
USP11-204ENST00000377107 PTPN13Q12923 2485 aa10.06□□□□□ -0.8
USP11-204ENST00000377107 NPIPB6E9PJ23 425 aa10.06□□□□□ -0.8
USP11-204ENST00000377107 SRD5A1P18405 259 aa10.06□□□□□ -0.8
USP11-204ENST00000377107 BMI1P35226 326 aa10.06□□□□□ -0.8
USP11-204ENST00000377107 LYPD1Q8N2G4 141 aa10.06□□□□□ -0.8
USP11-204ENST00000377107 AP1S3Q96PC3 154 aa10.06□□□□□ -0.8
USP11-204ENST00000377107 FAM231BA6NCW3 169 aa10.06□□□□□ -0.8
USP11-204ENST00000377107 F8W735 103 aaPredicted RBP10.06□□□□□ -0.8
USP11-204ENST00000377107 FAM104BQ5XKR9 115 aa10.06□□□□□ -0.8
USP11-204ENST00000377107 Q8N9W7 124 aa10.06□□□□□ -0.8
USP11-204ENST00000377107 ST20Q9HBF5 79 aa10.06□□□□□ -0.8
USP11-204ENST00000377107 MRPS16Q9Y3D3 137 aaKnown RBP10.06□□□□□ -0.8
USP11-204ENST00000377107 MYO9AB2RTY4 2548 aa10.05□□□□□ -0.8
USP11-204ENST00000377107 PET117Q6UWS5 81 aa10.05□□□□□ -0.8
USP11-204ENST00000377107 Q6ZQT7 251 aa10.05□□□□□ -0.8
USP11-204ENST00000377107 C16orf92Q96LL3 132 aa10.05□□□□□ -0.8
USP11-204ENST00000377107 ZNF747Q9BV97 191 aa10.05□□□□□ -0.8
USP11-204ENST00000377107 TRAV26-2A0A0B4J265 109 aa10.05□□□□□ -0.8
USP11-204ENST00000377107 SMAD5-AS1Q9Y6J3 95 aa10.05□□□□□ -0.8
USP11-204ENST00000377107 COX11Q9Y6N1 276 aa10.05□□□□□ -0.8
USP11-204ENST00000377107 FABP5P3A8MUU1 101 aa10.04□□□□□ -0.8
USP11-204ENST00000377107 FOXE3Q13461 319 aa10.04□□□□□ -0.8
USP11-204ENST00000377107 TMEM78Q5T7P6 136 aa10.04□□□□□ -0.8
USP11-204ENST00000377107 TTC9CQ8N5M4 171 aa10.04□□□□□ -0.8
USP11-204ENST00000377107 SPANXN1Q5VSR9 72 aa10.04□□□□□ -0.8
USP11-204ENST00000377107 SRSF8Q9BRL6 282 aaKnown RBP10.04□□□□□ -0.8
USP11-204ENST00000377107 ODF3BA8MYP8 253 aa10.04□□□□□ -0.8
USP11-204ENST00000377107 TRAV40A0A0B4J280 105 aa10.03□□□□□ -0.8
USP11-204ENST00000377107 C7orf71A4D174 169 aa10.03□□□□□ -0.8
USP11-204ENST00000377107 MRPS12O15235 138 aaKnown RBP10.03□□□□□ -0.8
USP11-204ENST00000377107 TRGV3P03979 118 aa10.03□□□□□ -0.8
USP11-204ENST00000377107 ANKRD39Q53RE8 183 aa10.03□□□□□ -0.8
USP11-204ENST00000377107 AMMECR1LQ6DCA0 310 aa10.03□□□□□ -0.8
USP11-204ENST00000377107 METTL26Q96S19 204 aa10.03□□□□□ -0.8
USP11-204ENST00000377107 LRRK2Q5S007 2527 aa10.03□□□□□ -0.8
USP11-204ENST00000377107 S100A4P26447 101 aaKnown RBP10.03□□□□□ -0.8
USP11-204ENST00000377107 LEPP41159 167 aa10.03□□□□□ -0.8
USP11-204ENST00000377107 PDE6HQ13956 83 aa10.03□□□□□ -0.8
USP11-204ENST00000377107 TTTY13Q9BZ97 58 aa10.03□□□□□ -0.8
USP11-204ENST00000377107 Q6AWC8 147 aa10.03□□□□□ -0.8
USP11-204ENST00000377107 IFI27L1Q96BM0 104 aa10.03□□□□□ -0.8
USP11-204ENST00000377107 SONP18583 2426 aaKnown RBP10.02□□□□□ -0.8
USP11-204ENST00000377107 M0R381 172 aa10.02□□□□□ -0.8
USP11-204ENST00000377107 PF4V1P10720 104 aa10.02□□□□□ -0.8
USP11-204ENST00000377107 GNLYP22749 145 aa10.02□□□□□ -0.8
USP11-204ENST00000377107 SMIM15Q7Z3B0 74 aa10.02□□□□□ -0.8
USP11-204ENST00000377107 UCNP55089 124 aa10.02□□□□□ -0.81
USP11-204ENST00000377107 PIP4P2Q8N4L2 257 aa10.02□□□□□ -0.81
USP11-204ENST00000377107 COL25A1Q9BXS0 654 aaPredicted RBP10.02□□□□□ -0.81
USP11-204ENST00000377107 MAP1LC3AQ9H492 121 aa10.02□□□□□ -0.81
USP11-204ENST00000377107 DKK2Q9UBU2 259 aa10.02□□□□□ -0.81
USP11-204ENST00000377107 HBDP02042 147 aa10.02□□□□□ -0.81
USP11-204ENST00000377107 ATP5G2Q06055 141 aa10.02□□□□□ -0.81
USP11-204ENST00000377107 C12orf54Q6X4T0 127 aa10.02□□□□□ -0.81
USP11-204ENST00000377107 FCER1GP30273 86 aa10.01□□□□□ -0.81
USP11-204ENST00000377107 MRPL52Q86TS9 123 aaKnown RBP10.01□□□□□ -0.81
USP11-204ENST00000377107 H3BVH4 76 aa10.01□□□□□ -0.81
USP11-204ENST00000377107 NPFFO15130 113 aa10.01□□□□□ -0.81
USP11-204ENST00000377107 FBXL19-AS1Q494R0 122 aa10.01□□□□□ -0.81
USP11-204ENST00000377107 BVES-AS1Q5T3Y7 98 aa10.01□□□□□ -0.81
USP11-204ENST00000377107 MINOS1Q5TGZ0 78 aa10.01□□□□□ -0.81
USP11-204ENST00000377107 EEF1AKMT3Q96AZ1 226 aa10.01□□□□□ -0.81
USP11-204ENST00000377107 AGPAT4-IT1Q9H0P7 198 aa10.01□□□□□ -0.81
USP11-204ENST00000377107 MINOS1-NBL1R4GNA1 71 aa10.01□□□□□ -0.81
USP11-204ENST00000377107 IGHV2-70DA0A0C4DH43 119 aa10□□□□□ -0.81
USP11-204ENST00000377107 C19orf84I3L1E1 186 aa10□□□□□ -0.81
USP11-204ENST00000377107 C11orf71Q6IPW1 123 aa10□□□□□ -0.81
USP11-204ENST00000377107 ABCA12Q86UK0 2595 aa10□□□□□ -0.81
USP11-204ENST00000377107 EFNA4P52798 201 aa10□□□□□ -0.81
USP11-204ENST00000377107 UBE2V1Q13404 147 aa10□□□□□ -0.81
USP11-204ENST00000377107 FLNCQ14315 2725 aa10□□□□□ -0.81
USP11-204ENST00000377107 GAGE1Q13065 139 aa10□□□□□ -0.81
USP11-204ENST00000377107 FOXC2Q99958 501 aa10□□□□□ -0.81
USP11-204ENST00000377107 TMEM160Q9NX00 188 aa10□□□□□ -0.81
USP11-204ENST00000377107 CCDC168Q8NDH2 2452 aa10□□□□□ -0.81
USP11-204ENST00000377107 A0A1B0GW15 77 aa9.99□□□□□ -0.81
USP11-204ENST00000377107 K7EMI3 77 aa9.99□□□□□ -0.81
USP11-204ENST00000377107 BUB3O43684 328 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms