RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 HOXB4P17483 251 aaPredicted RBP10.08□□□□□ -0.8
USP11-204ENST00000377107 LY6G5BQ8NDX9 201 aa10.08□□□□□ -0.8
USP11-204ENST00000377107 SIGLEC8Q9NYZ4 499 aa10.08□□□□□ -0.8
USP11-204ENST00000377107 M0R1W7 72 aa10.08□□□□□ -0.8
USP11-204ENST00000377107 DEFB1P60022 68 aa10.08□□□□□ -0.8
USP11-204ENST00000377107 PRSS57Q6UWY2 283 aa10.08□□□□□ -0.8
USP11-204ENST00000377107 MRPL51Q4U2R6 128 aaKnown RBP10.07□□□□□ -0.8
USP11-204ENST00000377107 SAPCD1Q5SSQ6 148 aa10.07□□□□□ -0.8
USP11-204ENST00000377107 LCNL1Q6ZST4 164 aa10.07□□□□□ -0.8
USP11-204ENST00000377107 IL17RELQ6ZVW7 336 aa10.07□□□□□ -0.8
USP11-204ENST00000377107 RAB37Q96AX2 223 aa10.07□□□□□ -0.8
USP11-204ENST00000377107 WI2-2373I1.2A0A1W2PRP0 233 aa10.07□□□□□ -0.8
USP11-204ENST00000377107 NPYP01303 97 aa10.07□□□□□ -0.8
USP11-204ENST00000377107 GLMPQ8WWB7 406 aa10.07□□□□□ -0.8
USP11-204ENST00000377107 CCL25O15444 150 aa10.07□□□□□ -0.8
USP11-204ENST00000377107 GAS8-AS1O95177 125 aa10.07□□□□□ -0.8
USP11-204ENST00000377107 WFDC12Q8WWY7 111 aa10.07□□□□□ -0.8
USP11-204ENST00000377107 PKD1L2Q7Z442 2459 aa10.07□□□□□ -0.8
USP11-204ENST00000377107 NDUFA3O95167 84 aa10.06□□□□□ -0.8
USP11-204ENST00000377107 NPBQ8NG41 125 aa10.06□□□□□ -0.8
USP11-204ENST00000377107 KLK15Q9H2R5 256 aa10.06□□□□□ -0.8
USP11-204ENST00000377107 MSRB2Q9Y3D2 182 aa10.06□□□□□ -0.8
USP11-204ENST00000377107 PTPN13Q12923 2485 aa10.06□□□□□ -0.8
USP11-204ENST00000377107 NPIPB6E9PJ23 425 aa10.06□□□□□ -0.8
USP11-204ENST00000377107 SRD5A1P18405 259 aa10.06□□□□□ -0.8
USP11-204ENST00000377107 BMI1P35226 326 aa10.06□□□□□ -0.8
USP11-204ENST00000377107 LYPD1Q8N2G4 141 aa10.06□□□□□ -0.8
USP11-204ENST00000377107 AP1S3Q96PC3 154 aa10.06□□□□□ -0.8
USP11-204ENST00000377107 FAM231BA6NCW3 169 aa10.06□□□□□ -0.8
USP11-204ENST00000377107 F8W735 103 aaPredicted RBP10.06□□□□□ -0.8
USP11-204ENST00000377107 FAM104BQ5XKR9 115 aa10.06□□□□□ -0.8
USP11-204ENST00000377107 Q8N9W7 124 aa10.06□□□□□ -0.8
USP11-204ENST00000377107 ST20Q9HBF5 79 aa10.06□□□□□ -0.8
USP11-204ENST00000377107 MRPS16Q9Y3D3 137 aaKnown RBP10.06□□□□□ -0.8
USP11-204ENST00000377107 MYO9AB2RTY4 2548 aa10.05□□□□□ -0.8
USP11-204ENST00000377107 PET117Q6UWS5 81 aa10.05□□□□□ -0.8
USP11-204ENST00000377107 Q6ZQT7 251 aa10.05□□□□□ -0.8
USP11-204ENST00000377107 C16orf92Q96LL3 132 aa10.05□□□□□ -0.8
USP11-204ENST00000377107 ZNF747Q9BV97 191 aa10.05□□□□□ -0.8
USP11-204ENST00000377107 TRAV26-2A0A0B4J265 109 aa10.05□□□□□ -0.8
USP11-204ENST00000377107 SMAD5-AS1Q9Y6J3 95 aa10.05□□□□□ -0.8
USP11-204ENST00000377107 COX11Q9Y6N1 276 aa10.05□□□□□ -0.8
USP11-204ENST00000377107 FABP5P3A8MUU1 101 aa10.04□□□□□ -0.8
USP11-204ENST00000377107 FOXE3Q13461 319 aa10.04□□□□□ -0.8
USP11-204ENST00000377107 TMEM78Q5T7P6 136 aa10.04□□□□□ -0.8
USP11-204ENST00000377107 TTC9CQ8N5M4 171 aa10.04□□□□□ -0.8
USP11-204ENST00000377107 SPANXN1Q5VSR9 72 aa10.04□□□□□ -0.8
USP11-204ENST00000377107 SRSF8Q9BRL6 282 aaKnown RBP10.04□□□□□ -0.8
USP11-204ENST00000377107 ODF3BA8MYP8 253 aa10.04□□□□□ -0.8
USP11-204ENST00000377107 TRAV40A0A0B4J280 105 aa10.03□□□□□ -0.8
USP11-204ENST00000377107 C7orf71A4D174 169 aa10.03□□□□□ -0.8
USP11-204ENST00000377107 MRPS12O15235 138 aaKnown RBP10.03□□□□□ -0.8
USP11-204ENST00000377107 TRGV3P03979 118 aa10.03□□□□□ -0.8
USP11-204ENST00000377107 ANKRD39Q53RE8 183 aa10.03□□□□□ -0.8
USP11-204ENST00000377107 AMMECR1LQ6DCA0 310 aa10.03□□□□□ -0.8
USP11-204ENST00000377107 METTL26Q96S19 204 aa10.03□□□□□ -0.8
USP11-204ENST00000377107 LRRK2Q5S007 2527 aa10.03□□□□□ -0.8
USP11-204ENST00000377107 S100A4P26447 101 aaKnown RBP10.03□□□□□ -0.8
USP11-204ENST00000377107 LEPP41159 167 aa10.03□□□□□ -0.8
USP11-204ENST00000377107 PDE6HQ13956 83 aa10.03□□□□□ -0.8
USP11-204ENST00000377107 TTTY13Q9BZ97 58 aa10.03□□□□□ -0.8
USP11-204ENST00000377107 Q6AWC8 147 aa10.03□□□□□ -0.8
USP11-204ENST00000377107 IFI27L1Q96BM0 104 aa10.03□□□□□ -0.8
USP11-204ENST00000377107 SONP18583 2426 aaKnown RBP10.02□□□□□ -0.8
USP11-204ENST00000377107 M0R381 172 aa10.02□□□□□ -0.8
USP11-204ENST00000377107 PF4V1P10720 104 aa10.02□□□□□ -0.8
USP11-204ENST00000377107 GNLYP22749 145 aa10.02□□□□□ -0.8
USP11-204ENST00000377107 SMIM15Q7Z3B0 74 aa10.02□□□□□ -0.8
USP11-204ENST00000377107 UCNP55089 124 aa10.02□□□□□ -0.81
USP11-204ENST00000377107 PIP4P2Q8N4L2 257 aa10.02□□□□□ -0.81
USP11-204ENST00000377107 COL25A1Q9BXS0 654 aaPredicted RBP10.02□□□□□ -0.81
USP11-204ENST00000377107 MAP1LC3AQ9H492 121 aa10.02□□□□□ -0.81
USP11-204ENST00000377107 DKK2Q9UBU2 259 aa10.02□□□□□ -0.81
USP11-204ENST00000377107 HBDP02042 147 aa10.02□□□□□ -0.81
USP11-204ENST00000377107 ATP5G2Q06055 141 aa10.02□□□□□ -0.81
USP11-204ENST00000377107 C12orf54Q6X4T0 127 aa10.02□□□□□ -0.81
USP11-204ENST00000377107 FCER1GP30273 86 aa10.01□□□□□ -0.81
USP11-204ENST00000377107 MRPL52Q86TS9 123 aaKnown RBP10.01□□□□□ -0.81
USP11-204ENST00000377107 H3BVH4 76 aa10.01□□□□□ -0.81
USP11-204ENST00000377107 NPFFO15130 113 aa10.01□□□□□ -0.81
USP11-204ENST00000377107 FBXL19-AS1Q494R0 122 aa10.01□□□□□ -0.81
USP11-204ENST00000377107 BVES-AS1Q5T3Y7 98 aa10.01□□□□□ -0.81
USP11-204ENST00000377107 MINOS1Q5TGZ0 78 aa10.01□□□□□ -0.81
USP11-204ENST00000377107 EEF1AKMT3Q96AZ1 226 aa10.01□□□□□ -0.81
USP11-204ENST00000377107 AGPAT4-IT1Q9H0P7 198 aa10.01□□□□□ -0.81
USP11-204ENST00000377107 MINOS1-NBL1R4GNA1 71 aa10.01□□□□□ -0.81
USP11-204ENST00000377107 IGHV2-70DA0A0C4DH43 119 aa10□□□□□ -0.81
USP11-204ENST00000377107 C19orf84I3L1E1 186 aa10□□□□□ -0.81
USP11-204ENST00000377107 C11orf71Q6IPW1 123 aa10□□□□□ -0.81
USP11-204ENST00000377107 ABCA12Q86UK0 2595 aa10□□□□□ -0.81
USP11-204ENST00000377107 EFNA4P52798 201 aa10□□□□□ -0.81
USP11-204ENST00000377107 UBE2V1Q13404 147 aa10□□□□□ -0.81
USP11-204ENST00000377107 FLNCQ14315 2725 aa10□□□□□ -0.81
USP11-204ENST00000377107 GAGE1Q13065 139 aa10□□□□□ -0.81
USP11-204ENST00000377107 FOXC2Q99958 501 aa10□□□□□ -0.81
USP11-204ENST00000377107 TMEM160Q9NX00 188 aa10□□□□□ -0.81
USP11-204ENST00000377107 CCDC168Q8NDH2 2452 aa10□□□□□ -0.81
USP11-204ENST00000377107 A0A1B0GW15 77 aa9.99□□□□□ -0.81
USP11-204ENST00000377107 K7EMI3 77 aa9.99□□□□□ -0.81
USP11-204ENST00000377107 BUB3O43684 328 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms