RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 GNPNAT1Q96EK6 184 aaPredicted RBP14.69□□□□□ -0.06
VSX1-201ENST00000376707 FAM167A-AS1Q96KT0 104 aa14.69□□□□□ -0.06
VSX1-201ENST00000376707 SLC25A2Q9BXI2 301 aa14.69□□□□□ -0.06
VSX1-201ENST00000376707 KCNIP2Q9NS61 270 aa14.69□□□□□ -0.06
VSX1-201ENST00000376707 PKD1P98161 4303 aa14.68□□□□□ -0.06
VSX1-201ENST00000376707 TRAV26-1A0A087WT03 109 aa14.68□□□□□ -0.06
VSX1-201ENST00000376707 M0R3E3 92 aa14.68□□□□□ -0.06
VSX1-201ENST00000376707 M6PRP20645 277 aa14.68□□□□□ -0.06
VSX1-201ENST00000376707 SSX7Q7RTT5 188 aa14.68□□□□□ -0.06
VSX1-201ENST00000376707 C6orf223Q8N319 242 aa14.68□□□□□ -0.06
VSX1-201ENST00000376707 PYGO2Q9BRQ0 406 aa14.68□□□□□ -0.06
VSX1-201ENST00000376707 TIMM9Q9Y5J7 89 aa14.68□□□□□ -0.06
VSX1-201ENST00000376707 DNAH11Q96DT5 4516 aa14.68□□□□□ -0.06
VSX1-201ENST00000376707 SSNA1O43805 119 aa14.66□□□□□ -0.06
VSX1-201ENST00000376707 MPC2O95563 127 aa14.66□□□□□ -0.06
VSX1-201ENST00000376707 TNP2Q05952 138 aa14.66□□□□□ -0.06
VSX1-201ENST00000376707 MIR17HGQ75NE6 70 aa14.66□□□□□ -0.06
VSX1-201ENST00000376707 RXFP4Q8TDU9 374 aa14.66□□□□□ -0.06
VSX1-201ENST00000376707 BLNKQ8WV28 456 aa14.66□□□□□ -0.06
VSX1-201ENST00000376707 FAM19A4Q96LR4 140 aa14.66□□□□□ -0.06
VSX1-201ENST00000376707 MRPL32Q9BYC8 188 aaKnown RBP14.66□□□□□ -0.06
VSX1-201ENST00000376707 BATF3Q9NR55 127 aa14.66□□□□□ -0.06
VSX1-201ENST00000376707 DYNC1H1Q14204 4646 aaKnown RBP14.65□□□□□ -0.06
VSX1-201ENST00000376707 A0A0J9YY99 117 aa14.65□□□□□ -0.06
VSX1-201ENST00000376707 SLC25A5P05141 298 aaKnown RBP14.65□□□□□ -0.06
VSX1-201ENST00000376707 PET100P0DJ07 73 aa14.65□□□□□ -0.06
VSX1-201ENST00000376707 ERCC8Q13216 396 aa14.65□□□□□ -0.06
VSX1-201ENST00000376707 EXOC3-AS1Q8N2X6 119 aa14.65□□□□□ -0.06
VSX1-201ENST00000376707 ZNF503Q96F45 646 aa14.65□□□□□ -0.06
VSX1-201ENST00000376707 LINC00477Q96M19 166 aa14.65□□□□□ -0.06
VSX1-201ENST00000376707 ATP5SQ99766 215 aa14.65□□□□□ -0.06
VSX1-201ENST00000376707 AAMDCQ9H7C9 122 aa14.65□□□□□ -0.06
VSX1-201ENST00000376707 C7orf71A4D174 169 aa14.64□□□□□ -0.07
VSX1-201ENST00000376707 KLLNB2CW77 178 aa14.64□□□□□ -0.07
VSX1-201ENST00000376707 C17orf112F2Z3M2 114 aa14.64□□□□□ -0.07
VSX1-201ENST00000376707 NBEAP1P0C6P0 100 aa14.64□□□□□ -0.07
VSX1-201ENST00000376707 HOXA5P20719 270 aa14.64□□□□□ -0.07
VSX1-201ENST00000376707 DAZ2Q13117 558 aaKnown RBP14.64□□□□□ -0.07
VSX1-201ENST00000376707 C9orf47Q6ZRZ4 202 aa14.64□□□□□ -0.07
VSX1-201ENST00000376707 AGPAT4-IT1Q9H0P7 198 aa14.64□□□□□ -0.07
VSX1-201ENST00000376707 OR51M1Q9H341 326 aa14.64□□□□□ -0.07
VSX1-201ENST00000376707 HSPB11Q9Y547 144 aa14.64□□□□□ -0.07
VSX1-201ENST00000376707 ICAM4Q14773 271 aa14.63□□□□□ -0.07
VSX1-201ENST00000376707 Q6ZTI0 123 aa14.63□□□□□ -0.07
VSX1-201ENST00000376707 ZNF680Q8NEM1 530 aa14.63□□□□□ -0.07
VSX1-201ENST00000376707 FXYD5Q96DB9 178 aa14.63□□□□□ -0.07
VSX1-201ENST00000376707 Q9H8V8 135 aa14.63□□□□□ -0.07
VSX1-201ENST00000376707 FUT9Q9Y231 359 aa14.63□□□□□ -0.07
VSX1-201ENST00000376707 NMBP08949 121 aa14.62□□□□□ -0.07
VSX1-201ENST00000376707 CRISP2P16562 243 aa14.62□□□□□ -0.07
VSX1-201ENST00000376707 LINC00467Q9BRT7 94 aa14.62□□□□□ -0.07
VSX1-201ENST00000376707 PAXXQ9BUH6 204 aa14.62□□□□□ -0.07
VSX1-201ENST00000376707 TMPRSS5Q9H3S3 457 aa14.62□□□□□ -0.07
VSX1-201ENST00000376707 GSN-AS1Q9NRJ2 163 aa14.62□□□□□ -0.07
VSX1-201ENST00000376707 TRGV2A0A075B6R0 118 aa14.61□□□□□ -0.07
VSX1-201ENST00000376707 H3BNG1 76 aa14.61□□□□□ -0.07
VSX1-201ENST00000376707 ZNF324O75467 553 aaPredicted RBP14.61□□□□□ -0.07
VSX1-201ENST00000376707 RPL12P30050 165 aaKnown RBP14.61□□□□□ -0.07
VSX1-201ENST00000376707 BTN1A1Q13410 526 aa14.61□□□□□ -0.07
VSX1-201ENST00000376707 C16orf90A8MZG2 172 aa14.6□□□□□ -0.07
VSX1-201ENST00000376707 RNASE4P34096 147 aaKnown RBP14.6□□□□□ -0.07
VSX1-201ENST00000376707 CD300CQ08708 224 aa14.6□□□□□ -0.07
VSX1-201ENST00000376707 TTC32Q5I0X7 151 aa14.6□□□□□ -0.07
VSX1-201ENST00000376707 EIF4E3Q8N5X7 224 aaKnown RBP14.6□□□□□ -0.07
VSX1-201ENST00000376707 MBD2Q9UBB5 411 aa14.6□□□□□ -0.07
VSX1-201ENST00000376707 GPX1P07203 203 aa14.59□□□□□ -0.07
VSX1-201ENST00000376707 OR10J4P0C629 311 aa14.59□□□□□ -0.07
VSX1-201ENST00000376707 TMEM78Q5T7P6 136 aa14.59□□□□□ -0.07
VSX1-201ENST00000376707 FAM122CQ6P4D5 195 aa14.59□□□□□ -0.07
VSX1-201ENST00000376707 VGLL1Q99990 258 aa14.59□□□□□ -0.07
VSX1-201ENST00000376707 IGKV2-40A0A087WW87 121 aaPredicted RBP14.58□□□□□ -0.08
VSX1-201ENST00000376707 TRGV1A0A0A0MS02 117 aa14.58□□□□□ -0.08
VSX1-201ENST00000376707 IFNA5P01569 189 aa14.58□□□□□ -0.08
VSX1-201ENST00000376707 IGKV2D-40P01614 121 aaPredicted RBP14.58□□□□□ -0.08
VSX1-201ENST00000376707 ESRGQ1W209 222 aa14.58□□□□□ -0.08
VSX1-201ENST00000376707 ANXA2RQ3ZCQ2 193 aa14.58□□□□□ -0.08
VSX1-201ENST00000376707 FFAR4Q5NUL3 377 aa14.58□□□□□ -0.08
VSX1-201ENST00000376707 LYPD1Q8N2G4 141 aa14.58□□□□□ -0.08
VSX1-201ENST00000376707 ZFAND2AQ8N6M9 145 aa14.58□□□□□ -0.08
VSX1-201ENST00000376707 C11orf72Q8NBR9 251 aa14.58□□□□□ -0.08
VSX1-201ENST00000376707 SCGB1C1Q8TD33 95 aa14.58□□□□□ -0.08
VSX1-201ENST00000376707 PHYHIPLQ96FC7 376 aa14.58□□□□□ -0.08
VSX1-201ENST00000376707 UPK3BQ9BT76 320 aa14.58□□□□□ -0.08
VSX1-201ENST00000376707 ZNF492Q9P255 531 aa14.58□□□□□ -0.08
VSX1-201ENST00000376707 TRBV7-9A0A0J9YWB2 115 aa14.57□□□□□ -0.08
VSX1-201ENST00000376707 OR7C2O60412 319 aa14.57□□□□□ -0.08
VSX1-201ENST00000376707 SMIM3Q9BZL3 60 aa14.57□□□□□ -0.08
VSX1-201ENST00000376707 MRPS16Q9Y3D3 137 aaKnown RBP14.57□□□□□ -0.08
VSX1-201ENST00000376707 RGS13O14921 159 aa14.56□□□□□ -0.08
VSX1-201ENST00000376707 C18orf15Q96N68 181 aa14.56□□□□□ -0.08
VSX1-201ENST00000376707 Q9H3A6 140 aa14.56□□□□□ -0.08
VSX1-201ENST00000376707 WFDC1Q9HC57 220 aa14.56□□□□□ -0.08
VSX1-201ENST00000376707 KLF12Q9Y4X4 402 aa14.56□□□□□ -0.08
VSX1-201ENST00000376707 RBAKDNA6NC62 111 aa14.55□□□□□ -0.08
VSX1-201ENST00000376707 ZNF138P52744 262 aa14.55□□□□□ -0.08
VSX1-201ENST00000376707 TCL1AP56279 114 aa14.55□□□□□ -0.08
VSX1-201ENST00000376707 RANP62826 216 aaKnown RBP14.55□□□□□ -0.08
VSX1-201ENST00000376707 KHDC3LQ587J8 217 aa14.55□□□□□ -0.08
VSX1-201ENST00000376707 PRR9Q5T870 116 aa14.55□□□□□ -0.08
VSX1-201ENST00000376707 KRTAP1-5Q9BYS1 174 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms