RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 EP300Q09472 2414 aaPredicted RBP16.88■□□□□ 0.29
TGFBR1-202ENST00000374994 C11orf53Q8IXP5 236 aa16.88■□□□□ 0.29
TGFBR1-202ENST00000374994 C20orf78Q9BR46 151 aa16.88■□□□□ 0.29
TGFBR1-202ENST00000374994 KLF12Q9Y4X4 402 aa16.88■□□□□ 0.29
TGFBR1-202ENST00000374994 ETDBQ3ZM63 59 aa16.87■□□□□ 0.29
TGFBR1-202ENST00000374994 LEPROTO15243 131 aa16.87■□□□□ 0.29
TGFBR1-202ENST00000374994 DUX4L9Q6RFH8 374 aaPredicted RBP16.87■□□□□ 0.29
TGFBR1-202ENST00000374994 CEND1Q8N111 149 aa16.87■□□□□ 0.29
TGFBR1-202ENST00000374994 A0A087WWL8 130 aa16.87■□□□□ 0.29
TGFBR1-202ENST00000374994 ATP6V0E1O15342 81 aa16.87■□□□□ 0.29
TGFBR1-202ENST00000374994 MRPL35Q9NZE8 188 aaKnown RBP16.87■□□□□ 0.29
TGFBR1-202ENST00000374994 K7EMI3 77 aa16.87■□□□□ 0.29
TGFBR1-202ENST00000374994 INSP01308 110 aa16.87■□□□□ 0.29
TGFBR1-202ENST00000374994 FGF23Q9GZV9 251 aaPredicted RBP16.87■□□□□ 0.29
TGFBR1-202ENST00000374994 TSSC4Q9Y5U2 329 aaPredicted RBP16.87■□□□□ 0.29
TGFBR1-202ENST00000374994 CDKN1BP46527 198 aa16.86■□□□□ 0.29
TGFBR1-202ENST00000374994 DTX2Q86UW9 622 aa16.86■□□□□ 0.29
TGFBR1-202ENST00000374994 NDUFS7O75251 213 aa16.86■□□□□ 0.29
TGFBR1-202ENST00000374994 OVOL3O00110 214 aa16.85■□□□□ 0.29
TGFBR1-202ENST00000374994 SPXQ9BT56 116 aa16.85■□□□□ 0.29
TGFBR1-202ENST00000374994 ZNF491Q8N8L2 437 aa16.85■□□□□ 0.29
TGFBR1-202ENST00000374994 C8orf86Q6ZUL3 223 aa16.85■□□□□ 0.29
TGFBR1-202ENST00000374994 TPSG1Q9NRR2 321 aa16.85■□□□□ 0.29
TGFBR1-202ENST00000374994 AKAP6Q13023 2319 aa16.84■□□□□ 0.29
TGFBR1-202ENST00000374994 ANAPC1Q9H1A4 1944 aa16.84■□□□□ 0.29
TGFBR1-202ENST00000374994 C11orf1Q9H5F2 150 aa16.84■□□□□ 0.29
TGFBR1-202ENST00000374994 IGHV2-70DA0A0C4DH43 119 aa16.84■□□□□ 0.29
TGFBR1-202ENST00000374994 SHISA9B4DS77 424 aa16.84■□□□□ 0.29
TGFBR1-202ENST00000374994 SRSF2Q01130 221 aaKnown RBP16.84■□□□□ 0.29
TGFBR1-202ENST00000374994 ROS1P08922 2347 aa16.84■□□□□ 0.29
TGFBR1-202ENST00000374994 PAX4O43316 350 aa16.83■□□□□ 0.29
TGFBR1-202ENST00000374994 TRAV8-3A0A0A6YYJ7 113 aa16.83■□□□□ 0.28
TGFBR1-202ENST00000374994 I3L3M4 83 aa16.83■□□□□ 0.28
TGFBR1-202ENST00000374994 NCOR1O75376 2440 aa16.83■□□□□ 0.28
TGFBR1-202ENST00000374994 NDUFA4O00483 81 aa16.83■□□□□ 0.28
TGFBR1-202ENST00000374994 INAFM2P0DMQ5 153 aa16.83■□□□□ 0.28
TGFBR1-202ENST00000374994 PRIMA1Q86XR5 153 aa16.83■□□□□ 0.28
TGFBR1-202ENST00000374994 PIP4P2Q8N4L2 257 aa16.83■□□□□ 0.28
TGFBR1-202ENST00000374994 A0A087WX48 190 aa16.83■□□□□ 0.28
TGFBR1-202ENST00000374994 SDHAF1A6NFY7 115 aa16.82■□□□□ 0.28
TGFBR1-202ENST00000374994 H3BMM0 161 aa16.82■□□□□ 0.28
TGFBR1-202ENST00000374994 UBE2WQ96B02 151 aa16.82■□□□□ 0.28
TGFBR1-202ENST00000374994 VGLL1Q99990 258 aa16.82■□□□□ 0.28
TGFBR1-202ENST00000374994 MAJINQ3KP22 176 aa16.82■□□□□ 0.28
TGFBR1-202ENST00000374994 TRGV1A0A0A0MS02 117 aa16.82■□□□□ 0.28
TGFBR1-202ENST00000374994 IGHV3-73A0A0B4J1V6 119 aa16.82■□□□□ 0.28
TGFBR1-202ENST00000374994 NPC2P61916 151 aa16.82■□□□□ 0.28
TGFBR1-202ENST00000374994 DNAJC30Q96LL9 226 aa16.82■□□□□ 0.28
TGFBR1-202ENST00000374994 C11orf68Q9H3H3 251 aaKnown RBP16.82■□□□□ 0.28
TGFBR1-202ENST00000374994 BRD3OSQ6XYD6 125 aa16.82■□□□□ 0.28
TGFBR1-202ENST00000374994 SPTBN1Q01082 2364 aaKnown RBP16.81■□□□□ 0.28
TGFBR1-202ENST00000374994 MRPL53Q96EL3 112 aaKnown RBP16.81■□□□□ 0.28
TGFBR1-202ENST00000374994 GAGE12HA6NDE8 117 aa16.81■□□□□ 0.28
TGFBR1-202ENST00000374994 NUPR1O60356 82 aa16.81■□□□□ 0.28
TGFBR1-202ENST00000374994 RBAKDNA6NC62 111 aa16.81■□□□□ 0.28
TGFBR1-202ENST00000374994 C1orf159Q96HA4 380 aa16.81■□□□□ 0.28
TGFBR1-202ENST00000374994 PRO1854Q9UHT4 67 aa16.81■□□□□ 0.28
TGFBR1-202ENST00000374994 LENEPQ9Y5L5 61 aa16.81■□□□□ 0.28
TGFBR1-202ENST00000374994 A0A1W2PRX2 142 aa16.8■□□□□ 0.28
TGFBR1-202ENST00000374994 IGF2BP2-AS1Q96M15 143 aa16.8■□□□□ 0.28
TGFBR1-202ENST00000374994 C1QTNF4Q9BXJ3 329 aa16.8■□□□□ 0.28
TGFBR1-202ENST00000374994 GATD1Q8NB37 220 aa16.8■□□□□ 0.28
TGFBR1-202ENST00000374994 LINC01545Q5VT33 79 aa16.8■□□□□ 0.28
TGFBR1-202ENST00000374994 FAM120AOSQ5T036 256 aa16.79■□□□□ 0.28
TGFBR1-202ENST00000374994 WNK2Q9Y3S1 2297 aa16.79■□□□□ 0.28
TGFBR1-202ENST00000374994 JPT2Q9H910 190 aa16.78■□□□□ 0.28
TGFBR1-202ENST00000374994 ZNF493Q6ZR52 646 aa16.78■□□□□ 0.28
TGFBR1-202ENST00000374994 DKK2Q9UBU2 259 aa16.78■□□□□ 0.28
TGFBR1-202ENST00000374994 HELZP42694 1942 aaKnown RBP16.78■□□□□ 0.28
TGFBR1-202ENST00000374994 GP9P14770 177 aa16.77■□□□□ 0.28
TGFBR1-202ENST00000374994 BPESC1Q9GZL8 116 aa16.77■□□□□ 0.28
TGFBR1-202ENST00000374994 IGHV1OR15-1A0A075B7D0 117 aa16.77■□□□□ 0.28
TGFBR1-202ENST00000374994 INS-IGF2F8WCM5 200 aa16.77■□□□□ 0.28
TGFBR1-202ENST00000374994 ANXA2RQ3ZCQ2 193 aa16.77■□□□□ 0.28
TGFBR1-202ENST00000374994 LHBP01229 141 aa16.77■□□□□ 0.28
TGFBR1-202ENST00000374994 GATA3P23771 443 aa16.77■□□□□ 0.28
TGFBR1-202ENST00000374994 C12orf74Q32Q52 190 aa16.77■□□□□ 0.28
TGFBR1-202ENST00000374994 CCL25O15444 150 aa16.77■□□□□ 0.27
TGFBR1-202ENST00000374994 DIAPH2-AS1Q14236 149 aa16.77■□□□□ 0.27
TGFBR1-202ENST00000374994 C1orf122Q6ZSJ8 110 aa16.76■□□□□ 0.27
TGFBR1-202ENST00000374994 FAM215AQ9Y5M1 114 aa16.76■□□□□ 0.27
TGFBR1-202ENST00000374994 HLA-DMBP28068 263 aa16.76■□□□□ 0.27
TGFBR1-202ENST00000374994 PLXND1Q9Y4D7 1925 aa16.76■□□□□ 0.27
TGFBR1-202ENST00000374994 PHLDA1Q8WV24 401 aaPredicted RBP16.76■□□□□ 0.27
TGFBR1-202ENST00000374994 FRMPD3Q5JV73 1810 aa16.76■□□□□ 0.27
TGFBR1-202ENST00000374994 C6orf226Q5I0X4 101 aa16.75■□□□□ 0.27
TGFBR1-202ENST00000374994 LY6HO94772 140 aa16.75■□□□□ 0.27
TGFBR1-202ENST00000374994 UNQ6494/PRO21346Q6UXR6 183 aa16.75■□□□□ 0.27
TGFBR1-202ENST00000374994 LCNL1Q6ZST4 164 aa16.75■□□□□ 0.27
TGFBR1-202ENST00000374994 GPR179Q6PRD1 2367 aa16.75■□□□□ 0.27
TGFBR1-202ENST00000374994 DEFB104AQ8WTQ1 72 aa16.75■□□□□ 0.27
TGFBR1-202ENST00000374994 DOCK11Q5JSL3 2073 aa16.75■□□□□ 0.27
TGFBR1-202ENST00000374994 TRAV26-2A0A0B4J265 109 aa16.75■□□□□ 0.27
TGFBR1-202ENST00000374994 ATP6V0BQ99437 205 aa16.75■□□□□ 0.27
TGFBR1-202ENST00000374994 TRAV13-1A0A0B4J241 112 aa16.74■□□□□ 0.27
TGFBR1-202ENST00000374994 IGHV1-69DA0A0B4J2H0 117 aa16.74■□□□□ 0.27
TGFBR1-202ENST00000374994 J3QQQ9 107 aa16.74■□□□□ 0.27
TGFBR1-202ENST00000374994 IGHV1-69P01742 117 aa16.74■□□□□ 0.27
TGFBR1-202ENST00000374994 G3V318 75 aa16.73■□□□□ 0.27
TGFBR1-202ENST00000374994 TANC1Q9C0D5 1861 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms