RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 IGHV1-3A0A0C4DH29 117 aa6.84□□□□□ -1.32
HSPG2-203ENST00000374695 SHISA9B4DS77 424 aa6.84□□□□□ -1.32
HSPG2-203ENST00000374695 Q6ZS49 121 aa6.84□□□□□ -1.32
HSPG2-203ENST00000374695 TMEM256Q8N2U0 113 aa6.84□□□□□ -1.32
HSPG2-203ENST00000374695 FAM27E3Q08E93 113 aa6.83□□□□□ -1.32
HSPG2-203ENST00000374695 C5orf47Q569G3 176 aa6.83□□□□□ -1.32
HSPG2-203ENST00000374695 HERVK_113P63121 156 aa6.83□□□□□ -1.32
HSPG2-203ENST00000374695 LHFPL1Q86WI0 220 aa6.83□□□□□ -1.32
HSPG2-203ENST00000374695 LYPD6BQ8NI32 183 aa6.83□□□□□ -1.32
HSPG2-203ENST00000374695 Q8N8P6 123 aa6.83□□□□□ -1.32
HSPG2-203ENST00000374695 TSSC4Q9Y5U2 329 aaPredicted RBP6.83□□□□□ -1.32
HSPG2-203ENST00000374695 TRAV13-1A0A0B4J241 112 aa6.83□□□□□ -1.32
HSPG2-203ENST00000374695 CTSBP07858 339 aa6.83□□□□□ -1.32
HSPG2-203ENST00000374695 SRRM5B3KS81 715 aa6.83□□□□□ -1.32
HSPG2-203ENST00000374695 H0YIZ8 118 aa6.83□□□□□ -1.32
HSPG2-203ENST00000374695 HAMPP81172 84 aa6.83□□□□□ -1.32
HSPG2-203ENST00000374695 SCRT2Q9NQ03 307 aa6.83□□□□□ -1.32
HSPG2-203ENST00000374695 AMN1Q8IY45 258 aa6.83□□□□□ -1.32
HSPG2-203ENST00000374695 GATA3P23771 443 aa6.83□□□□□ -1.32
HSPG2-203ENST00000374695 MP68P56378 58 aa6.83□□□□□ -1.32
HSPG2-203ENST00000374695 CEP350Q5VT06 3117 aa6.83□□□□□ -1.32
HSPG2-203ENST00000374695 PFN1P07737 140 aaKnown RBP6.83□□□□□ -1.32
HSPG2-203ENST00000374695 LYZL4Q96KX0 146 aa6.82□□□□□ -1.32
HSPG2-203ENST00000374695 FGF6P10767 208 aa6.82□□□□□ -1.32
HSPG2-203ENST00000374695 C9orf106Q8NAJ2 232 aa6.82□□□□□ -1.32
HSPG2-203ENST00000374695 TMEM243Q9BU79 118 aa6.82□□□□□ -1.32
HSPG2-203ENST00000374695 C1QCP02747 245 aa6.82□□□□□ -1.32
HSPG2-203ENST00000374695 F8VRH5 84 aa6.82□□□□□ -1.32
HSPG2-203ENST00000374695 SLC25A16P16260 332 aa6.82□□□□□ -1.32
HSPG2-203ENST00000374695 NSUN5P1Q3KNT7 163 aa6.82□□□□□ -1.32
HSPG2-203ENST00000374695 IGLV3-19P01714 112 aa6.82□□□□□ -1.32
HSPG2-203ENST00000374695 FUSP35637 526 aaKnown RBP eCLIP6.82□□□□□ -1.321e-7■■■■□ 23.1
HSPG2-203ENST00000374695 NBL1P41271 181 aa6.82□□□□□ -1.32
HSPG2-203ENST00000374695 ATP6V0E2Q8NHE4 81 aa6.82□□□□□ -1.32
HSPG2-203ENST00000374695 IGLV3-12A0A075B6K2 115 aa6.82□□□□□ -1.32
HSPG2-203ENST00000374695 RPP25LQ8N5L8 163 aaKnown RBP6.82□□□□□ -1.32
HSPG2-203ENST00000374695 CHKB-CPT1BH3BT56 60 aa6.82□□□□□ -1.32
HSPG2-203ENST00000374695 G3V4G9 280 aa6.82□□□□□ -1.32
HSPG2-203ENST00000374695 TP53TG1Q9Y2A0 90 aa6.82□□□□□ -1.32
HSPG2-203ENST00000374695 HLA-DRB4P13762 266 aa6.82□□□□□ -1.32
HSPG2-203ENST00000374695 SHANK2-AS3Q9BTD1 123 aa6.82□□□□□ -1.32
HSPG2-203ENST00000374695 HLA-DRB4X5D2U9 266 aa6.82□□□□□ -1.32
HSPG2-203ENST00000374695 ORMDL1Q9P0S3 153 aa6.81□□□□□ -1.32
HSPG2-203ENST00000374695 E9PLN8 166 aa6.81□□□□□ -1.32
HSPG2-203ENST00000374695 H0YJW9 148 aa6.81□□□□□ -1.32
HSPG2-203ENST00000374695 MST1P26927 711 aa6.81□□□□□ -1.32
HSPG2-203ENST00000374695 PRSS47A8MTI9 375 aa6.81□□□□□ -1.32
HSPG2-203ENST00000374695 VSIRQ9H7M9 311 aa6.81□□□□□ -1.32
HSPG2-203ENST00000374695 A0A087WWL8 130 aa6.81□□□□□ -1.32
HSPG2-203ENST00000374695 IGKV1-9A0A0C4DH69 117 aa6.81□□□□□ -1.32
HSPG2-203ENST00000374695 B4DSR2 109 aa6.81□□□□□ -1.32
HSPG2-203ENST00000374695 CELA3AP09093 270 aa6.81□□□□□ -1.32
HSPG2-203ENST00000374695 RPL35AP18077 110 aaKnown RBP6.81□□□□□ -1.32
HSPG2-203ENST00000374695 MORN5Q5VZ52 161 aa6.81□□□□□ -1.32
HSPG2-203ENST00000374695 ZNF462Q96JM2 2506 aa6.81□□□□□ -1.32
HSPG2-203ENST00000374695 A0A1W2PR77 199 aa6.81□□□□□ -1.32
HSPG2-203ENST00000374695 TMEM178BH3BS89 294 aa6.81□□□□□ -1.32
HSPG2-203ENST00000374695 ATOX1O00244 68 aa6.81□□□□□ -1.32
HSPG2-203ENST00000374695 FAM201AQ5SY85 155 aa6.81□□□□□ -1.32
HSPG2-203ENST00000374695 TRAV25A0A0B4J276 109 aa6.81□□□□□ -1.32
HSPG2-203ENST00000374695 ADCYAP1P18509 176 aa6.81□□□□□ -1.32
HSPG2-203ENST00000374695 CFHR1Q03591 330 aa6.81□□□□□ -1.32
HSPG2-203ENST00000374695 A0A0A6YYD4 124 aa6.81□□□□□ -1.32
HSPG2-203ENST00000374695 NDUFS5O43920 106 aa6.81□□□□□ -1.32
HSPG2-203ENST00000374695 C1orf43Q9BWL3 253 aa6.81□□□□□ -1.32
HSPG2-203ENST00000374695 BUB1B-PAK6H3BSN5 160 aa6.81□□□□□ -1.32
HSPG2-203ENST00000374695 IGHV1-46P01743 117 aa6.81□□□□□ -1.32
HSPG2-203ENST00000374695 APOC4P55056 127 aa6.81□□□□□ -1.32
HSPG2-203ENST00000374695 CSRP2Q16527 193 aa6.81□□□□□ -1.32
HSPG2-203ENST00000374695 FAM104BQ5XKR9 115 aa6.81□□□□□ -1.32
HSPG2-203ENST00000374695 PIP4P2Q8N4L2 257 aa6.8□□□□□ -1.32
HSPG2-203ENST00000374695 C3orf36Q3SXR2 165 aa6.8□□□□□ -1.32
HSPG2-203ENST00000374695 SIGLEC9Q9Y336 463 aa6.8□□□□□ -1.32
HSPG2-203ENST00000374695 SMIM27A0A1W2PRY6 76 aa6.8□□□□□ -1.32
HSPG2-203ENST00000374695 Q8TAT8 98 aa6.8□□□□□ -1.32
HSPG2-203ENST00000374695 C18orf32Q8TCD1 76 aa6.8□□□□□ -1.32
HSPG2-203ENST00000374695 C22orf46C9J442 243 aa6.8□□□□□ -1.32
HSPG2-203ENST00000374695 LTBRP36941 435 aa6.8□□□□□ -1.32
HSPG2-203ENST00000374695 SYNJ2BPP57105 145 aa6.8□□□□□ -1.32
HSPG2-203ENST00000374695 CARD19Q96LW7 228 aa6.8□□□□□ -1.32
HSPG2-203ENST00000374695 F6UB75 175 aa6.8□□□□□ -1.32
HSPG2-203ENST00000374695 IGHG2P01859 326 aa6.8□□□□□ -1.32
HSPG2-203ENST00000374695 LGALS9BQ3B8N2 356 aa6.8□□□□□ -1.32
HSPG2-203ENST00000374695 ATP1A1-AS1Q5TC04 95 aa6.8□□□□□ -1.32
HSPG2-203ENST00000374695 LGALS9CQ6DKI2 356 aa6.8□□□□□ -1.32
HSPG2-203ENST00000374695 IGKV1D-43A0A0B4J1Z2 117 aa6.8□□□□□ -1.32
HSPG2-203ENST00000374695 TMEM200BQ69YZ2 307 aa6.8□□□□□ -1.32
HSPG2-203ENST00000374695 SETD2Q9BYW2 2564 aaPredicted RBP6.8□□□□□ -1.32
HSPG2-203ENST00000374695 KLHL30-AS1Q8NEE0 82 aa6.8□□□□□ -1.32
HSPG2-203ENST00000374695 NTN3O00634 580 aaPredicted RBP6.79□□□□□ -1.32
HSPG2-203ENST00000374695 EFNA4P52798 201 aa6.79□□□□□ -1.32
HSPG2-203ENST00000374695 RHOHQ15669 191 aa6.79□□□□□ -1.32
HSPG2-203ENST00000374695 CDKN1AP38936 164 aa6.79□□□□□ -1.32
HSPG2-203ENST00000374695 FAM231DQ6ZW35 169 aa6.79□□□□□ -1.32
HSPG2-203ENST00000374695 IGHV1-18A0A0C4DH31 117 aa6.79□□□□□ -1.32
HSPG2-203ENST00000374695 CRYGSP22914 178 aa6.79□□□□□ -1.32
HSPG2-203ENST00000374695 ETDBQ3ZM63 59 aa6.79□□□□□ -1.32
HSPG2-203ENST00000374695 BMPERQ8N8U9 685 aa6.79□□□□□ -1.32
HSPG2-203ENST00000374695 ZCCHC24Q8N2G6 241 aaKnown RBP6.79□□□□□ -1.32
HSPG2-203ENST00000374695 C2orf66Q6UXQ4 117 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms