RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 SDHCQ99643 169 aaPredicted RBP9.4□□□□□ -0.9
CXCL12-202ENST00000374426 AGPAT4-IT1Q9H0P7 198 aa9.4□□□□□ -0.9
CXCL12-202ENST00000374426 C11orf1Q9H5F2 150 aa9.4□□□□□ -0.9
CXCL12-202ENST00000374426 SLC39A9Q9NUM3 307 aa9.4□□□□□ -0.9
CXCL12-202ENST00000374426 PTTG2Q9NZH5 202 aa9.4□□□□□ -0.9
CXCL12-202ENST00000374426 ICOSQ9Y6W8 199 aa9.4□□□□□ -0.9
CXCL12-202ENST00000374426 CCDC160A6NGH7 325 aa9.39□□□□□ -0.91
CXCL12-202ENST00000374426 L7N2F9 121 aa9.39□□□□□ -0.91
CXCL12-202ENST00000374426 EREGO14944 169 aa9.39□□□□□ -0.91
CXCL12-202ENST00000374426 IGHV3-53P01767 116 aa9.39□□□□□ -0.91
CXCL12-202ENST00000374426 DNAH10OSP0CZ25 163 aa9.39□□□□□ -0.91
CXCL12-202ENST00000374426 INAFM2P0DMQ5 153 aa9.39□□□□□ -0.91
CXCL12-202ENST00000374426 RNASE4P34096 147 aaKnown RBP9.39□□□□□ -0.91
CXCL12-202ENST00000374426 RPL29P47914 159 aaKnown RBP9.39□□□□□ -0.91
CXCL12-202ENST00000374426 BCAP31P51572 246 aa9.39□□□□□ -0.91
CXCL12-202ENST00000374426 CAV2P51636 162 aa9.39□□□□□ -0.91
CXCL12-202ENST00000374426 VAMP2P63027 116 aa9.39□□□□□ -0.91
CXCL12-202ENST00000374426 VWC2Q2TAL6 325 aa9.39□□□□□ -0.91
CXCL12-202ENST00000374426 IBA57Q5T440 356 aaKnown RBP9.39□□□□□ -0.91
CXCL12-202ENST00000374426 LINC00477Q96M19 166 aa9.39□□□□□ -0.91
CXCL12-202ENST00000374426 UQCC1Q9NVA1 299 aa9.39□□□□□ -0.91
CXCL12-202ENST00000374426 TMEM14CQ9P0S9 112 aa9.39□□□□□ -0.91
CXCL12-202ENST00000374426 TP53TG3Q9ULZ0 132 aa9.39□□□□□ -0.91
CXCL12-202ENST00000374426 LSM5Q9Y4Y9 91 aaKnown RBP9.39□□□□□ -0.91
CXCL12-202ENST00000374426 FAM24AA6NFZ4 105 aa9.38□□□□□ -0.91
CXCL12-202ENST00000374426 MPDU1O75352 247 aa9.38□□□□□ -0.91
CXCL12-202ENST00000374426 CRISP2P16562 243 aa9.38□□□□□ -0.91
CXCL12-202ENST00000374426 KRTAP10-1P60331 282 aa9.38□□□□□ -0.91
CXCL12-202ENST00000374426 PRR9Q5T870 116 aa9.38□□□□□ -0.91
CXCL12-202ENST00000374426 LYPD5Q6UWN5 251 aa9.38□□□□□ -0.91
CXCL12-202ENST00000374426 Q6ZQT7 251 aa9.38□□□□□ -0.91
CXCL12-202ENST00000374426 EXOC3-AS1Q8N2X6 119 aa9.38□□□□□ -0.91
CXCL12-202ENST00000374426 ZFAND2AQ8N6M9 145 aa9.38□□□□□ -0.91
CXCL12-202ENST00000374426 RBM38Q9H0Z9 239 aaKnown RBP9.38□□□□□ -0.91
CXCL12-202ENST00000374426 MRPL16Q9NX20 251 aaKnown RBP9.38□□□□□ -0.91
CXCL12-202ENST00000374426 PRO0255Q9UI72 69 aa9.38□□□□□ -0.91
CXCL12-202ENST00000374426 PRELID1Q9Y255 219 aa9.38□□□□□ -0.91
CXCL12-202ENST00000374426 A0A087WTM6 91 aa9.37□□□□□ -0.91
CXCL12-202ENST00000374426 UBE2L5PA0A1B0GUS4 154 aa9.37□□□□□ -0.91
CXCL12-202ENST00000374426 CENPXA8MT69 81 aa9.37□□□□□ -0.91
CXCL12-202ENST00000374426 GPX1P07203 203 aa9.37□□□□□ -0.91
CXCL12-202ENST00000374426 PYYP10082 97 aa9.37□□□□□ -0.91
CXCL12-202ENST00000374426 HIST1H1EP10412 219 aaKnown RBP9.37□□□□□ -0.91
CXCL12-202ENST00000374426 CRYBA4P53673 196 aa9.37□□□□□ -0.91
CXCL12-202ENST00000374426 PDE6HQ13956 83 aa9.37□□□□□ -0.91
CXCL12-202ENST00000374426 FHL2Q14192 279 aa9.37□□□□□ -0.91
CXCL12-202ENST00000374426 ZNF846Q147U1 533 aa9.37□□□□□ -0.91
CXCL12-202ENST00000374426 Q5VSD8 79 aa9.37□□□□□ -0.91
CXCL12-202ENST00000374426 C9orf47Q6ZRZ4 202 aa9.37□□□□□ -0.91
CXCL12-202ENST00000374426 NFE4Q86UQ8 179 aa9.37□□□□□ -0.91
CXCL12-202ENST00000374426 C12orf45Q8N5I9 185 aaPredicted RBP9.37□□□□□ -0.91
CXCL12-202ENST00000374426 VGLL1Q99990 258 aa9.37□□□□□ -0.91
CXCL12-202ENST00000374426 IGKV2-40A0A087WW87 121 aaPredicted RBP9.36□□□□□ -0.91
CXCL12-202ENST00000374426 FAM25EA8MYX2 175 aa9.36□□□□□ -0.91
CXCL12-202ENST00000374426 RGS13O14921 159 aa9.36□□□□□ -0.91
CXCL12-202ENST00000374426 PRAF2O60831 178 aa9.36□□□□□ -0.91
CXCL12-202ENST00000374426 IGKV2D-40P01614 121 aaPredicted RBP9.36□□□□□ -0.91
CXCL12-202ENST00000374426 NMBP08949 121 aa9.36□□□□□ -0.91
CXCL12-202ENST00000374426 BAXQ07812 192 aa9.36□□□□□ -0.91
CXCL12-202ENST00000374426 CHAC2Q8WUX2 184 aa9.36□□□□□ -0.91
CXCL12-202ENST00000374426 BLNKQ8WV28 456 aa9.36□□□□□ -0.91
CXCL12-202ENST00000374426 C8orf49Q96NF6 230 aa9.36□□□□□ -0.91
CXCL12-202ENST00000374426 C20orf85Q9H1P6 137 aa9.36□□□□□ -0.91
CXCL12-202ENST00000374426 HHLA3Q9XRX5 114 aa9.36□□□□□ -0.91
CXCL12-202ENST00000374426 TIMM9Q9Y5J7 89 aa9.36□□□□□ -0.91
CXCL12-202ENST00000374426 IGHV1OR15-1A0A075B7D0 117 aa9.35□□□□□ -0.91
CXCL12-202ENST00000374426 IGSF23A1L1A6 192 aa9.35□□□□□ -0.91
CXCL12-202ENST00000374426 IL7P13232 177 aa9.35□□□□□ -0.91
CXCL12-202ENST00000374426 S100A11P31949 105 aa9.35□□□□□ -0.91
CXCL12-202ENST00000374426 SULT1A1P50225 295 aa9.35□□□□□ -0.91
CXCL12-202ENST00000374426 SLAQ13239 276 aa9.35□□□□□ -0.91
CXCL12-202ENST00000374426 ICAM4Q14773 271 aa9.35□□□□□ -0.91
CXCL12-202ENST00000374426 MRPL23Q16540 153 aaKnown RBP9.35□□□□□ -0.91
CXCL12-202ENST00000374426 GCSAMLQ5JQS6 135 aa9.35□□□□□ -0.91
CXCL12-202ENST00000374426 NEGR1Q7Z3B1 354 aa9.35□□□□□ -0.91
CXCL12-202ENST00000374426 FRZBQ92765 325 aa9.35□□□□□ -0.91
CXCL12-202ENST00000374426 LYRM2Q9NU23 88 aaPredicted RBP9.35□□□□□ -0.91
CXCL12-202ENST00000374426 LY96Q9Y6Y9 160 aa9.35□□□□□ -0.91
CXCL12-202ENST00000374426 C5orf51A6NDU8 294 aa9.34□□□□□ -0.91
CXCL12-202ENST00000374426 IFNA5P01569 189 aa9.34□□□□□ -0.91
CXCL12-202ENST00000374426 FGF7P21781 194 aa9.34□□□□□ -0.91
CXCL12-202ENST00000374426 CNPY1Q3B7I2 92 aa9.34□□□□□ -0.91
CXCL12-202ENST00000374426 TMEM78Q5T7P6 136 aa9.34□□□□□ -0.91
CXCL12-202ENST00000374426 FAM122CQ6P4D5 195 aa9.34□□□□□ -0.91
CXCL12-202ENST00000374426 TMEM252Q8N6L7 170 aa9.34□□□□□ -0.91
CXCL12-202ENST00000374426 ARPC5LQ9BPX5 153 aa9.34□□□□□ -0.91
CXCL12-202ENST00000374426 SLC25A2Q9BXI2 301 aa9.34□□□□□ -0.91
CXCL12-202ENST00000374426 AAMDCQ9H7C9 122 aa9.34□□□□□ -0.91
CXCL12-202ENST00000374426 TRAV9-2A0A087WT02 112 aa9.33□□□□□ -0.92
CXCL12-202ENST00000374426 E5RGE8 158 aa9.33□□□□□ -0.92
CXCL12-202ENST00000374426 PLA2G10O15496 165 aa9.33□□□□□ -0.92
CXCL12-202ENST00000374426 PVALBP20472 110 aaPredicted RBP9.33□□□□□ -0.92
CXCL12-202ENST00000374426 IL15RAQ13261 267 aa9.33□□□□□ -0.92
CXCL12-202ENST00000374426 WFDC10BQ8IUB3 73 aa9.33□□□□□ -0.92
CXCL12-202ENST00000374426 FAM167A-AS1Q96KT0 104 aa9.33□□□□□ -0.92
CXCL12-202ENST00000374426 C2orf50Q96LR7 162 aa9.33□□□□□ -0.92
CXCL12-202ENST00000374426 SEC22CQ9BRL7 303 aa9.33□□□□□ -0.92
CXCL12-202ENST00000374426 MRPL32Q9BYC8 188 aaKnown RBP9.33□□□□□ -0.92
CXCL12-202ENST00000374426 MSRB1Q9NZV6 116 aa9.33□□□□□ -0.92
CXCL12-202ENST00000374426 ZNF492Q9P255 531 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms