RNA–Protein interactions for RNA: ENST00000373034.8

PCDH19-202, Transcript of protocadherin 19, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH19, Length 9,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-202ENST00000373034 K7EMI3 77 aa12.54□□□□□ -0.4
PCDH19-202ENST00000373034 NPSP0C0P6 89 aa12.54□□□□□ -0.4
PCDH19-202ENST00000373034 HGFACQ04756 655 aa12.54□□□□□ -0.4
PCDH19-202ENST00000373034 IGKV1-9A0A0C4DH69 117 aa12.54□□□□□ -0.4
PCDH19-202ENST00000373034 TINCRA0A1B0GVN0 87 aa12.54□□□□□ -0.4
PCDH19-202ENST00000373034 BUB1B-PAK6H3BSN5 160 aa12.54□□□□□ -0.4
PCDH19-202ENST00000373034 TIAF1O95411 115 aa12.54□□□□□ -0.4
PCDH19-202ENST00000373034 NUP210Q8TEM1 1887 aaPredicted RBP12.54□□□□□ -0.4
PCDH19-202ENST00000373034 PRR14LQ5THK1 2151 aa12.54□□□□□ -0.4
PCDH19-202ENST00000373034 ATP1A1-AS1Q5TC04 95 aa12.54□□□□□ -0.4
PCDH19-202ENST00000373034 DEFB130BP0DP73 79 aa12.54□□□□□ -0.4
PCDH19-202ENST00000373034 DEFB130AP0DP74 79 aa12.54□□□□□ -0.4
PCDH19-202ENST00000373034 TMEM219Q86XT9 240 aa12.54□□□□□ -0.4
PCDH19-202ENST00000373034 KIF26AQ9ULI4 1882 aaPredicted RBP12.54□□□□□ -0.4
PCDH19-202ENST00000373034 SRRM5B3KS81 715 aa12.54□□□□□ -0.4
PCDH19-202ENST00000373034 PRSS57Q6UWY2 283 aa12.54□□□□□ -0.4
PCDH19-202ENST00000373034 RNASE2P10153 161 aaKnown RBP12.54□□□□□ -0.4
PCDH19-202ENST00000373034 IGHV2-70P01814 119 aa12.53□□□□□ -0.4
PCDH19-202ENST00000373034 CGB3P0DN86 165 aa12.53□□□□□ -0.4
PCDH19-202ENST00000373034 DEFB121Q5J5C9 76 aa12.53□□□□□ -0.4
PCDH19-202ENST00000373034 MCRIP2Q9BUT9 160 aaKnown RBP12.53□□□□□ -0.4
PCDH19-202ENST00000373034 SIP14410 1827 aa12.53□□□□□ -0.4
PCDH19-202ENST00000373034 COL11A2P13942 1736 aaPredicted RBP12.53□□□□□ -0.4
PCDH19-202ENST00000373034 PAQR4Q8N4S7 273 aaPredicted RBP12.53□□□□□ -0.4
PCDH19-202ENST00000373034 C8orf31Q8N9H6 132 aa12.53□□□□□ -0.4
PCDH19-202ENST00000373034 NTF4P34130 210 aa12.53□□□□□ -0.4
PCDH19-202ENST00000373034 SIGLEC9Q9Y336 463 aa12.52□□□□□ -0.4
PCDH19-202ENST00000373034 ZNF883P0CG24 379 aa12.52□□□□□ -0.4
PCDH19-202ENST00000373034 UBE2E2Q96LR5 201 aa12.52□□□□□ -0.4
PCDH19-202ENST00000373034 C9orf106Q8NAJ2 232 aa12.52□□□□□ -0.41
PCDH19-202ENST00000373034 DAD1P61803 113 aa12.52□□□□□ -0.41
PCDH19-202ENST00000373034 C11orf44Q8N8P7 122 aa12.52□□□□□ -0.41
PCDH19-202ENST00000373034 ZNF837Q96EG3 531 aaPredicted RBP12.52□□□□□ -0.41
PCDH19-202ENST00000373034 MSRB2Q9Y3D2 182 aa12.52□□□□□ -0.41
PCDH19-202ENST00000373034 IGHV1-18A0A0C4DH31 117 aa12.52□□□□□ -0.41
PCDH19-202ENST00000373034 SMIM27A0A1W2PRY6 76 aa12.52□□□□□ -0.41
PCDH19-202ENST00000373034 SHANK2-AS3Q9BTD1 123 aa12.52□□□□□ -0.41
PCDH19-202ENST00000373034 CGB7P0DN87 165 aa12.51□□□□□ -0.41
PCDH19-202ENST00000373034 TRBV6-6A0A0A6YYG2 114 aa12.51□□□□□ -0.41
PCDH19-202ENST00000373034 NLRC5Q86WI3 1866 aa12.51□□□□□ -0.41
PCDH19-202ENST00000373034 IGLV3-32A0A0A0MS00 114 aa12.51□□□□□ -0.41
PCDH19-202ENST00000373034 F5H768 121 aa12.51□□□□□ -0.41
PCDH19-202ENST00000373034 RHPN1-AS1Q9BWJ2 59 aa12.5□□□□□ -0.41
PCDH19-202ENST00000373034 NPYP01303 97 aa12.5□□□□□ -0.41
PCDH19-202ENST00000373034 IGHV1-46P01743 117 aa12.5□□□□□ -0.41
PCDH19-202ENST00000373034 SORL1Q92673 2214 aa12.5□□□□□ -0.41
PCDH19-202ENST00000373034 BAALC-AS2P0C853 105 aa12.5□□□□□ -0.41
PCDH19-202ENST00000373034 APOC4P55056 127 aa12.5□□□□□ -0.41
PCDH19-202ENST00000373034 NDUFB1O75438 58 aa12.5□□□□□ -0.41
PCDH19-202ENST00000373034 C20orf204Q6ZNR8 217 aa12.5□□□□□ -0.41
PCDH19-202ENST00000373034 DKK1O94907 266 aa12.5□□□□□ -0.41
PCDH19-202ENST00000373034 TMEM178BH3BS89 294 aa12.5□□□□□ -0.41
PCDH19-202ENST00000373034 SDHAF1A6NFY7 115 aa12.49□□□□□ -0.41
PCDH19-202ENST00000373034 NTN3O00634 580 aaPredicted RBP12.49□□□□□ -0.41
PCDH19-202ENST00000373034 J3QQQ9 107 aa12.49□□□□□ -0.41
PCDH19-202ENST00000373034 PRSS29PA6NIE9 313 aa12.49□□□□□ -0.41
PCDH19-202ENST00000373034 SP7Q8TDD2 431 aaPredicted RBP12.49□□□□□ -0.41
PCDH19-202ENST00000373034 A0A1B0GX51 115 aa12.49□□□□□ -0.41
PCDH19-202ENST00000373034 C14orf132Q9NPU4 83 aa12.49□□□□□ -0.41
PCDH19-202ENST00000373034 VWC2Q2TAL6 325 aa12.49□□□□□ -0.41
PCDH19-202ENST00000373034 HS3ST6Q96QI5 342 aa12.49□□□□□ -0.41
PCDH19-202ENST00000373034 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.48□□□□□ -0.41
PCDH19-202ENST00000373034 MRPL51Q4U2R6 128 aaKnown RBP12.48□□□□□ -0.41
PCDH19-202ENST00000373034 E9PLN8 166 aa12.48□□□□□ -0.41
PCDH19-202ENST00000373034 IGKV1-5P01602 117 aa12.48□□□□□ -0.41
PCDH19-202ENST00000373034 PRRC2AP48634 2157 aaKnown RBP12.48□□□□□ -0.41
PCDH19-202ENST00000373034 K7ERJ3 54 aa12.48□□□□□ -0.41
PCDH19-202ENST00000373034 B4DSR2 109 aa12.48□□□□□ -0.41
PCDH19-202ENST00000373034 HERV-K104P63124 156 aa12.48□□□□□ -0.41
PCDH19-202ENST00000373034 ANXA2RQ3ZCQ2 193 aa12.48□□□□□ -0.41
PCDH19-202ENST00000373034 ZCCHC24Q8N2G6 241 aaKnown RBP12.48□□□□□ -0.41
PCDH19-202ENST00000373034 CRYGCP07315 174 aa12.48□□□□□ -0.41
PCDH19-202ENST00000373034 IGKV1D-8A0A087WSZ0 117 aa12.48□□□□□ -0.41
PCDH19-202ENST00000373034 C15orf62A8K5M9 175 aa12.48□□□□□ -0.41
PCDH19-202ENST00000373034 PLXNA4Q9HCM2 1894 aa12.47□□□□□ -0.41
PCDH19-202ENST00000373034 CREBBPQ92793 2442 aa12.47□□□□□ -0.41
PCDH19-202ENST00000373034 PRSS47A8MTI9 375 aa12.47□□□□□ -0.41
PCDH19-202ENST00000373034 FOXF2Q12947 444 aa12.47□□□□□ -0.41
PCDH19-202ENST00000373034 Q6ZS49 121 aa12.47□□□□□ -0.41
PCDH19-202ENST00000373034 BRK1Q8WUW1 75 aa12.47□□□□□ -0.41
PCDH19-202ENST00000373034 C8orf49Q96NF6 230 aa12.47□□□□□ -0.41
PCDH19-202ENST00000373034 C20orf78Q9BR46 151 aa12.47□□□□□ -0.41
PCDH19-202ENST00000373034 TEX48A0A1B0GUV7 120 aa12.47□□□□□ -0.41
PCDH19-202ENST00000373034 H3BUX3 64 aa12.47□□□□□ -0.41
PCDH19-202ENST00000373034 PRB4P10163 310 aaPredicted RBP12.47□□□□□ -0.41
PCDH19-202ENST00000373034 PSMB8P28062 276 aa12.47□□□□□ -0.41
PCDH19-202ENST00000373034 LINC00527Q9UJ94 153 aa12.47□□□□□ -0.41
PCDH19-202ENST00000373034 PROP1O75360 226 aa12.46□□□□□ -0.41
PCDH19-202ENST00000373034 A0A0B4J2C4 111 aa12.46□□□□□ -0.41
PCDH19-202ENST00000373034 C12orf74Q32Q52 190 aa12.46□□□□□ -0.41
PCDH19-202ENST00000373034 EFNA4P52798 201 aa12.46□□□□□ -0.41
PCDH19-202ENST00000373034 MDS2Q8NDY4 140 aa12.46□□□□□ -0.41
PCDH19-202ENST00000373034 PRR31Q5SQ13 230 aa12.46□□□□□ -0.41
PCDH19-202ENST00000373034 C10orf55Q5SWW7 151 aa12.46□□□□□ -0.41
PCDH19-202ENST00000373034 MUSTN1Q8IVN3 82 aa12.46□□□□□ -0.42
PCDH19-202ENST00000373034 ZNF672Q499Z4 452 aaPredicted RBP12.46□□□□□ -0.42
PCDH19-202ENST00000373034 PYGO2Q9BRQ0 406 aa12.46□□□□□ -0.42
PCDH19-202ENST00000373034 ADAMTS9Q9P2N4 1935 aa12.46□□□□□ -0.42
PCDH19-202ENST00000373034 Q6ZWC4 215 aa12.45□□□□□ -0.42
PCDH19-202ENST00000373034 TRAV3A0A0B4J244 114 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms