RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 RRN3P1Q2M238 152 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 DEFB110Q30KQ9 67 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 SLC25A34Q6PIV7 304 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 TRAPPC6BQ86SZ2 158 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 LINC00596Q86U02 117 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 RPS19BP1Q86WX3 136 aaKnown RBP2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 KCNRGQ8N5I3 272 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 C3orf22Q8N5N4 141 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 METTL27Q8N6F8 245 aaPredicted RBP2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 ZNF525Q8N782 197 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 COPS9Q8WXC6 57 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 CNRIP1Q96F85 164 aaPredicted RBP2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 HYLS1Q96M11 299 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 ERMAPQ96PL5 475 aaPredicted RBP2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 TMEM243Q9BU79 118 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 C11orf68Q9H3H3 251 aaKnown RBP2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 SLC25A22Q9H936 323 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 SIX2Q9NPC8 291 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 DPM3Q9P2X0 92 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 SRRM2Q9UQ35 2752 aaKnown RBP2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 TRBV20OR9-2A0A075B6H5 130 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 TRAV27A0A087WT01 109 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 IGKV1-8A0A0C4DH67 115 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 C4orf51C9J302 202 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 LST1O00453 97 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 RER1O15258 196 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 CST7O76096 145 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 NAPSAO96009 420 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 PMP2P02689 132 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 ZSCAN5DPP0CG00 497 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 IGLC1P0CG04 106 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 NFYBP25208 207 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 CRYBB3P26998 211 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 GABARAPL2P60520 117 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 HERVK_113P61574 105 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 WDR38Q5JTN6 314 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 ZNF720Q7Z2F6 126 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 C10orf126Q8N4M7 172 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 YIPF7Q8N8F6 280 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 APCDD1LQ8NCL9 501 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 OR4K13Q8NH42 304 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 NEUROG1Q92886 237 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 VAMP8Q9BV40 100 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 NAA60Q9H7X0 242 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 FKBP11Q9NYL4 201 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 ZNF443Q9Y2A4 671 aaPredicted RBP2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 U3KQK5 164 aa2.6□□□□□ -1.99
ECHDC1-205ENST00000368295 EML6Q6ZMW3 1958 aa2.59□□□□□ -1.99
ECHDC1-205ENST00000368295 OR2T8A6NH00 312 aa2.59□□□□□ -2
ECHDC1-205ENST00000368295 A8MUN3 132 aa2.59□□□□□ -2
ECHDC1-205ENST00000368295 B4DEV8 164 aa2.59□□□□□ -2
ECHDC1-205ENST00000368295 IGLL5B9A064 214 aa2.59□□□□□ -2
ECHDC1-205ENST00000368295 COX7A2LO14548 114 aa2.59□□□□□ -2
ECHDC1-205ENST00000368295 MRPS14O60783 128 aaKnown RBP2.59□□□□□ -2
ECHDC1-205ENST00000368295 LY6HO94772 140 aa2.59□□□□□ -2
ECHDC1-205ENST00000368295 HLA-DQB1P01920 261 aa2.59□□□□□ -2
ECHDC1-205ENST00000368295 COX6A1P12074 109 aa2.59□□□□□ -2
ECHDC1-205ENST00000368295 LGALS3P17931 250 aaKnown RBP2.59□□□□□ -2
ECHDC1-205ENST00000368295 POLR2IP36954 125 aaKnown RBP2.59□□□□□ -2
ECHDC1-205ENST00000368295 ZNF136P52737 540 aa2.59□□□□□ -2
ECHDC1-205ENST00000368295 TMEM183BQ1AE95 376 aa2.59□□□□□ -2
ECHDC1-205ENST00000368295 Q5BKY6 102 aa2.59□□□□□ -2
ECHDC1-205ENST00000368295 RFLNAQ6ZTI6 216 aa2.59□□□□□ -2
ECHDC1-205ENST00000368295 LINC00173Q6ZV60 143 aa2.59□□□□□ -2
ECHDC1-205ENST00000368295 LINC00305Q7Z4B0 112 aa2.59□□□□□ -2
ECHDC1-205ENST00000368295 PRNTQ86SH4 94 aa2.59□□□□□ -2
ECHDC1-205ENST00000368295 BPIFB6Q8NFQ5 453 aa2.59□□□□□ -2
ECHDC1-205ENST00000368295 OR5AK2Q8NH90 309 aa2.59□□□□□ -2
ECHDC1-205ENST00000368295 MCEEQ96PE7 176 aa2.59□□□□□ -2
ECHDC1-205ENST00000368295 CIB3Q96Q77 187 aaPredicted RBP2.59□□□□□ -2
ECHDC1-205ENST00000368295 PEBP4Q96S96 227 aa2.59□□□□□ -2
ECHDC1-205ENST00000368295 TBL1YQ9BQ87 522 aa2.59□□□□□ -2
ECHDC1-205ENST00000368295 NAA38Q9BRA0 125 aaKnown RBP2.59□□□□□ -2
ECHDC1-205ENST00000368295 ADAT1Q9BUB4 502 aaKnown RBP2.59□□□□□ -2
ECHDC1-205ENST00000368295 SLC25A2Q9BXI2 301 aa2.59□□□□□ -2
ECHDC1-205ENST00000368295 SMCO4Q9NRQ5 59 aa2.59□□□□□ -2
ECHDC1-205ENST00000368295 MOB4Q9Y3A3 225 aa2.59□□□□□ -2
ECHDC1-205ENST00000368295 RNF213Q63HN8 5207 aa2.59□□□□□ -2
ECHDC1-205ENST00000368295 IGHV4-4A0A075B6R2 117 aa2.58□□□□□ -2
ECHDC1-205ENST00000368295 IGKV1-27A0A075B6S5 117 aa2.58□□□□□ -2
ECHDC1-205ENST00000368295 IGHV4OR15-8A0A075B7B6 117 aa2.58□□□□□ -2
ECHDC1-205ENST00000368295 FAM236AA0A1B0GUQ0 79 aa2.58□□□□□ -2
ECHDC1-205ENST00000368295 FAM236BA0A1B0GV22 79 aa2.58□□□□□ -2
ECHDC1-205ENST00000368295 M0R1X1 148 aa2.58□□□□□ -2
ECHDC1-205ENST00000368295 PDCD5O14737 125 aa2.58□□□□□ -2
ECHDC1-205ENST00000368295 NDUFB2O95178 105 aa2.58□□□□□ -2
ECHDC1-205ENST00000368295 APOC3P02656 99 aa2.58□□□□□ -2
ECHDC1-205ENST00000368295 LINC00869P0C866 280 aa2.58□□□□□ -2
ECHDC1-205ENST00000368295 CDKN2AP42771 156 aaKnown RBP2.58□□□□□ -2
ECHDC1-205ENST00000368295 INSL3P51460 131 aa2.58□□□□□ -2
ECHDC1-205ENST00000368295 CYCSP99999 105 aaKnown RBP2.58□□□□□ -2
ECHDC1-205ENST00000368295 ATP5G2Q06055 141 aa2.58□□□□□ -2
ECHDC1-205ENST00000368295 IL17AQ16552 155 aa2.58□□□□□ -2
ECHDC1-205ENST00000368295 IZUMO2Q6UXV1 221 aa2.58□□□□□ -2
ECHDC1-205ENST00000368295 ZNF705AQ6ZN79 300 aaPredicted RBP2.58□□□□□ -2
ECHDC1-205ENST00000368295 LCA10Q71F78 164 aa2.58□□□□□ -2
ECHDC1-205ENST00000368295 GTSCR1Q86UQ5 136 aa2.58□□□□□ -2
ECHDC1-205ENST00000368295 MDP1Q86V88 176 aa2.58□□□□□ -2
ECHDC1-205ENST00000368295 ATOH7Q8N100 152 aa2.58□□□□□ -2
ECHDC1-205ENST00000368295 RAB37Q96AX2 223 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms