RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 EFCAB11Q9BUY7 163 aa0.27□□□□□ -2.37
RNU6-560P-201ENST00000364007 MED11Q9P086 117 aa0.27□□□□□ -2.37
RNU6-560P-201ENST00000364007 KPNA4O00629 521 aaPredicted RBP0.26□□□□□ -2.37
RNU6-560P-201ENST00000364007 TCTAP57738 103 aa0.26□□□□□ -2.37
RNU6-560P-201ENST00000364007 ANGPTL5Q86XS5 388 aa0.26□□□□□ -2.37
RNU6-560P-201ENST00000364007 FAM24BQ8N5W8 94 aa0.26□□□□□ -2.37
RNU6-560P-201ENST00000364007 CCL4L1Q8NHW4 92 aa0.26□□□□□ -2.37
RNU6-560P-201ENST00000364007 LPAR5Q9H1C0 372 aa0.26□□□□□ -2.37
RNU6-560P-201ENST00000364007 LRTM1Q9HBL6 345 aa0.26□□□□□ -2.37
RNU6-560P-201ENST00000364007 NAT8BQ9UHF3 227 aa0.26□□□□□ -2.37
RNU6-560P-201ENST00000364007 FAT4Q6V0I7 4981 aa0.26□□□□□ -2.37
RNU6-560P-201ENST00000364007 MUC5ACP98088 5654 aa0.26□□□□□ -2.37
RNU6-560P-201ENST00000364007 MAST4O15021 2626 aa0.25□□□□□ -2.37
RNU6-560P-201ENST00000364007 RBBP6Q7Z6E9 1792 aaKnown RBP0.25□□□□□ -2.37
RNU6-560P-201ENST00000364007 TRAPPC8Q9Y2L5 1435 aa0.25□□□□□ -2.37
RNU6-560P-201ENST00000364007 TRDV1A0A1B0GX56 115 aa0.25□□□□□ -2.37
RNU6-560P-201ENST00000364007 TMEM238C9JI98 176 aa0.25□□□□□ -2.37
RNU6-560P-201ENST00000364007 H3BQV1 296 aa0.25□□□□□ -2.37
RNU6-560P-201ENST00000364007 CASC2Q6XLA1 102 aa0.25□□□□□ -2.37
RNU6-560P-201ENST00000364007 STX19Q8N4C7 294 aa0.25□□□□□ -2.37
RNU6-560P-201ENST00000364007 DYDC1Q8WWB3 177 aa0.25□□□□□ -2.37
RNU6-560P-201ENST00000364007 DIRC1Q969H9 104 aa0.25□□□□□ -2.37
RNU6-560P-201ENST00000364007 GID8Q9NWU2 228 aa0.25□□□□□ -2.37
RNU6-560P-201ENST00000364007 H7BYZ3 331 aa0.24□□□□□ -2.37
RNU6-560P-201ENST00000364007 FABP2P12104 132 aa0.24□□□□□ -2.37
RNU6-560P-201ENST00000364007 FXYD6P3P58550 94 aa0.24□□□□□ -2.37
RNU6-560P-201ENST00000364007 TSKUQ8WUA8 353 aa0.24□□□□□ -2.37
RNU6-560P-201ENST00000364007 IL20Q9NYY1 176 aa0.24□□□□□ -2.37
RNU6-560P-201ENST00000364007 ZCCHC11Q5TAX3 1644 aaKnown RBP0.24□□□□□ -2.37
RNU6-560P-201ENST00000364007 ESPL1Q14674 2120 aa0.23□□□□□ -2.37
RNU6-560P-201ENST00000364007 YTHDC2Q9H6S0 1430 aaKnown RBP0.23□□□□□ -2.37
RNU6-560P-201ENST00000364007 C3orf85A0A1B0GTC6 90 aa0.23□□□□□ -2.37
RNU6-560P-201ENST00000364007 GABARAPH6UMI1 98 aa0.23□□□□□ -2.37
RNU6-560P-201ENST00000364007 LY6G6CO95867 125 aa0.23□□□□□ -2.37
RNU6-560P-201ENST00000364007 G0S2P27469 103 aa0.23□□□□□ -2.37
RNU6-560P-201ENST00000364007 SERPINB1P30740 379 aa0.23□□□□□ -2.37
RNU6-560P-201ENST00000364007 CRYBA4P53673 196 aa0.23□□□□□ -2.37
RNU6-560P-201ENST00000364007 MRPS36P82909 103 aaKnown RBP0.23□□□□□ -2.37
RNU6-560P-201ENST00000364007 C10orf111Q8N326 155 aa0.23□□□□□ -2.37
RNU6-560P-201ENST00000364007 OR4B1Q8NGF8 309 aa0.23□□□□□ -2.37
RNU6-560P-201ENST00000364007 MCEEQ96PE7 176 aa0.23□□□□□ -2.37
RNU6-560P-201ENST00000364007 BIN3Q9NQY0 253 aa0.23□□□□□ -2.37
RNU6-560P-201ENST00000364007 NUBP2Q9Y5Y2 271 aa0.23□□□□□ -2.37
RNU6-560P-201ENST00000364007 DLC1Q96QB1 1528 aa0.23□□□□□ -2.37
RNU6-560P-201ENST00000364007 TCOF1Q13428 1488 aaKnown RBP0.22□□□□□ -2.37
RNU6-560P-201ENST00000364007 C5orf58C9J3I9 102 aa0.22□□□□□ -2.37
RNU6-560P-201ENST00000364007 OR5H6Q8NGV6 325 aa0.22□□□□□ -2.37
RNU6-560P-201ENST00000364007 OR5AK2Q8NH90 309 aa0.22□□□□□ -2.37
RNU6-560P-201ENST00000364007 CLEC2BQ92478 149 aa0.22□□□□□ -2.37
RNU6-560P-201ENST00000364007 TRACP01848 142 aa0.21□□□□□ -2.38
RNU6-560P-201ENST00000364007 QRFPP83859 136 aa0.21□□□□□ -2.38
RNU6-560P-201ENST00000364007 C3orf33Q6P1S2 294 aa0.21□□□□□ -2.38
RNU6-560P-201ENST00000364007 LAMTOR3Q9UHA4 124 aa0.21□□□□□ -2.38
RNU6-560P-201ENST00000364007 DSPPQ9NZW4 1301 aa0.2□□□□□ -2.38
RNU6-560P-201ENST00000364007 A6NN06 94 aa0.2□□□□□ -2.38
RNU6-560P-201ENST00000364007 SULT1C4O75897 302 aa0.2□□□□□ -2.38
RNU6-560P-201ENST00000364007 IGHV3-30P01768 117 aa0.2□□□□□ -2.38
RNU6-560P-201ENST00000364007 IGHV3-30-5P0DP03 117 aa0.2□□□□□ -2.38
RNU6-560P-201ENST00000364007 CAV3P56539 151 aa0.2□□□□□ -2.38
RNU6-560P-201ENST00000364007 C5orf17Q8NAS9 161 aa0.2□□□□□ -2.38
RNU6-560P-201ENST00000364007 BOLA2Q9H3K6 86 aa0.2□□□□□ -2.38
RNU6-560P-201ENST00000364007 MAP2P11137 1827 aaKnown RBP0.2□□□□□ -2.38
RNU6-560P-201ENST00000364007 MAP1LC3B2A6NCE7 125 aa0.19□□□□□ -2.38
RNU6-560P-201ENST00000364007 PPP5D1E7EU14 171 aa0.19□□□□□ -2.38
RNU6-560P-201ENST00000364007 RPS3P23396 243 aaKnown RBP eCLIP0.19□□□□□ -2.38
RNU6-560P-201ENST00000364007 S100A11P31949 105 aa0.19□□□□□ -2.38
RNU6-560P-201ENST00000364007 NDUFA6P56556 154 aa0.19□□□□□ -2.38
RNU6-560P-201ENST00000364007 PPP1R2P3Q6NXS1 205 aa0.19□□□□□ -2.38
RNU6-560P-201ENST00000364007 CSAG1Q6PB30 78 aa0.19□□□□□ -2.38
RNU6-560P-201ENST00000364007 DCUN1D2Q6PH85 259 aa0.19□□□□□ -2.38
RNU6-560P-201ENST00000364007 GRPEL2Q8TAA5 225 aa0.19□□□□□ -2.38
RNU6-560P-201ENST00000364007 PRELID3AQ96N28 172 aa0.19□□□□□ -2.38
RNU6-560P-201ENST00000364007 FKBP11Q9NYL4 201 aa0.19□□□□□ -2.38
RNU6-560P-201ENST00000364007 XIRP1Q702N8 1843 aaKnown RBP0.19□□□□□ -2.38
RNU6-560P-201ENST00000364007 SDC2P34741 201 aa0.18□□□□□ -2.38
RNU6-560P-201ENST00000364007 GNG10P50151 68 aa0.18□□□□□ -2.38
RNU6-560P-201ENST00000364007 MAXP61244 160 aa0.18□□□□□ -2.38
RNU6-560P-201ENST00000364007 GLYATL3Q5SZD4 288 aa0.18□□□□□ -2.38
RNU6-560P-201ENST00000364007 TRIQKQ629K1 86 aa0.18□□□□□ -2.38
RNU6-560P-201ENST00000364007 XAF1Q6GPH4 301 aa0.18□□□□□ -2.38
RNU6-560P-201ENST00000364007 TEX29Q8N6K0 151 aa0.18□□□□□ -2.38
RNU6-560P-201ENST00000364007 ISOC1Q96CN7 298 aa0.18□□□□□ -2.38
RNU6-560P-201ENST00000364007 AP1S3Q96PC3 154 aa0.18□□□□□ -2.38
RNU6-560P-201ENST00000364007 CIB3Q96Q77 187 aaPredicted RBP0.18□□□□□ -2.38
RNU6-560P-201ENST00000364007 ABCA1O95477 2261 aa0.18□□□□□ -2.38
RNU6-560P-201ENST00000364007 FGD6Q6ZV73 1430 aa0.18□□□□□ -2.38
RNU6-560P-201ENST00000364007 KMT2DO14686 5537 aa0.18□□□□□ -2.38
RNU6-560P-201ENST00000364007 HELZP42694 1942 aaKnown RBP0.17□□□□□ -2.38
RNU6-560P-201ENST00000364007 LOC107984156A0A0G2JMH3 177 aa0.17□□□□□ -2.38
RNU6-560P-201ENST00000364007 A0A1W2PRS3 328 aa0.17□□□□□ -2.38
RNU6-560P-201ENST00000364007 BCL2P10415 239 aa0.17□□□□□ -2.38
RNU6-560P-201ENST00000364007 SNRPD3P62318 126 aaKnown RBP0.17□□□□□ -2.38
RNU6-560P-201ENST00000364007 FAM135BQ49AJ0 1406 aa0.17□□□□□ -2.38
RNU6-560P-201ENST00000364007 C10orf99Q6UWK7 81 aa0.17□□□□□ -2.38
RNU6-560P-201ENST00000364007 IZUMO2Q6UXV1 221 aa0.17□□□□□ -2.38
RNU6-560P-201ENST00000364007 STX12Q86Y82 276 aa0.17□□□□□ -2.38
RNU6-560P-201ENST00000364007 ARL17AQ8IVW1 177 aa0.17□□□□□ -2.38
RNU6-560P-201ENST00000364007 LINC00208Q96KT6 92 aa0.17□□□□□ -2.38
RNU6-560P-201ENST00000364007 NABP2Q9BQ15 211 aa0.17□□□□□ -2.38
RNU6-560P-201ENST00000364007 RREB1Q92766 1687 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms