RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 TAC4Q86UU9 113 aa0.92□□□□□ -2.26
RNU6-28P-201ENST00000362378 MORN4Q8NDC4 146 aa0.92□□□□□ -2.26
RNU6-28P-201ENST00000362378 MRPL40Q9NQ50 206 aaKnown RBP0.92□□□□□ -2.26
RNU6-28P-201ENST00000362378 DLC1Q96QB1 1528 aa0.92□□□□□ -2.26
RNU6-28P-201ENST00000362378 A2MP01023 1474 aa0.92□□□□□ -2.26
RNU6-28P-201ENST00000362378 FAM135BQ49AJ0 1406 aa0.91□□□□□ -2.26
RNU6-28P-201ENST00000362378 C5orf58C9J3I9 102 aa0.91□□□□□ -2.26
RNU6-28P-201ENST00000362378 H3BMG7 143 aa0.91□□□□□ -2.26
RNU6-28P-201ENST00000362378 SAA1P0DJI8 122 aaPredicted RBP0.91□□□□□ -2.26
RNU6-28P-201ENST00000362378 TPT1P13693 172 aaKnown RBP0.91□□□□□ -2.26
RNU6-28P-201ENST00000362378 LINC00299Q6ZSB3 139 aa0.91□□□□□ -2.26
RNU6-28P-201ENST00000362378 TEX29Q8N6K0 151 aa0.91□□□□□ -2.26
RNU6-28P-201ENST00000362378 OR5AK2Q8NH90 309 aa0.91□□□□□ -2.26
RNU6-28P-201ENST00000362378 CLEC2BQ92478 149 aa0.91□□□□□ -2.26
RNU6-28P-201ENST00000362378 WFDC10AQ9H1F0 79 aa0.91□□□□□ -2.26
RNU6-28P-201ENST00000362378 CBLN4Q9NTU7 201 aa0.91□□□□□ -2.26
RNU6-28P-201ENST00000362378 GINS2Q9Y248 185 aa0.91□□□□□ -2.26
RNU6-28P-201ENST00000362378 UNC13CQ8NB66 2214 aa0.91□□□□□ -2.26
RNU6-28P-201ENST00000362378 RPS28P62857 69 aaKnown RBP0.9□□□□□ -2.27
RNU6-28P-201ENST00000362378 SPATA45Q537H7 98 aa0.9□□□□□ -2.27
RNU6-28P-201ENST00000362378 Q8N6K4 173 aa0.9□□□□□ -2.27
RNU6-28P-201ENST00000362378 TMEM35BQ8NCS4 154 aa0.9□□□□□ -2.27
RNU6-28P-201ENST00000362378 NAT14Q8WUY8 206 aa0.9□□□□□ -2.27
RNU6-28P-201ENST00000362378 HSPB11Q9Y547 144 aa0.9□□□□□ -2.27
RNU6-28P-201ENST00000362378 MYO18AQ92614 2054 aaKnown RBP0.9□□□□□ -2.27
RNU6-28P-201ENST00000362378 UNC13AQ9UPW8 1703 aa0.89□□□□□ -2.27
RNU6-28P-201ENST00000362378 USP54Q70EL1 1684 aa0.89□□□□□ -2.27
RNU6-28P-201ENST00000362378 ARAP1Q96P48 1450 aa0.89□□□□□ -2.27
RNU6-28P-201ENST00000362378 A0A0J9YY99 117 aa0.89□□□□□ -2.27
RNU6-28P-201ENST00000362378 FOXA3P55318 350 aaPredicted RBP0.89□□□□□ -2.27
RNU6-28P-201ENST00000362378 GLIPR1L1Q6UWM5 242 aa0.89□□□□□ -2.27
RNU6-28P-201ENST00000362378 LINC00575Q6W349 94 aa0.89□□□□□ -2.27
RNU6-28P-201ENST00000362378 CASC2Q6XLA1 102 aa0.89□□□□□ -2.27
RNU6-28P-201ENST00000362378 SBSPONQ8IVN8 264 aa0.89□□□□□ -2.27
RNU6-28P-201ENST00000362378 ANKRD30AQ9BXX3 1397 aa0.88□□□□□ -2.27
RNU6-28P-201ENST00000362378 LAMA4Q16363 1823 aa0.88□□□□□ -2.27
RNU6-28P-201ENST00000362378 J3KT08 172 aa0.88□□□□□ -2.27
RNU6-28P-201ENST00000362378 IGLV3-1P01715 115 aa0.88□□□□□ -2.27
RNU6-28P-201ENST00000362378 CRYGSP22914 178 aa0.88□□□□□ -2.27
RNU6-28P-201ENST00000362378 RPL22P35268 128 aaKnown RBP0.88□□□□□ -2.27
RNU6-28P-201ENST00000362378 PRB3Q04118 309 aaPredicted RBP0.88□□□□□ -2.27
RNU6-28P-201ENST00000362378 TMEM229BQ8NBD8 167 aa0.88□□□□□ -2.27
RNU6-28P-201ENST00000362378 OR5A2Q8NGI9 324 aa0.88□□□□□ -2.27
RNU6-28P-201ENST00000362378 OR10AC1Q8NH08 325 aa0.88□□□□□ -2.27
RNU6-28P-201ENST00000362378 NABP2Q9BQ15 211 aa0.88□□□□□ -2.27
RNU6-28P-201ENST00000362378 TRAV23DV6A0A075B6W5 121 aa0.87□□□□□ -2.27
RNU6-28P-201ENST00000362378 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.87□□□□□ -2.27
RNU6-28P-201ENST00000362378 C3orf85A0A1B0GTC6 90 aa0.87□□□□□ -2.27
RNU6-28P-201ENST00000362378 LOC107986453A0A1B0GWG9 222 aa0.87□□□□□ -2.27
RNU6-28P-201ENST00000362378 ARL5CA6NH57 179 aa0.87□□□□□ -2.27
RNU6-28P-201ENST00000362378 CD14P08571 375 aa0.87□□□□□ -2.27
RNU6-28P-201ENST00000362378 CCL4P13236 92 aa0.87□□□□□ -2.27
RNU6-28P-201ENST00000362378 IZUMO2Q6UXV1 221 aa0.87□□□□□ -2.27
RNU6-28P-201ENST00000362378 AKAP14Q86UN6 197 aa0.87□□□□□ -2.27
RNU6-28P-201ENST00000362378 OR51A4Q8NGJ6 313 aa0.87□□□□□ -2.27
RNU6-28P-201ENST00000362378 CIB3Q96Q77 187 aaPredicted RBP0.87□□□□□ -2.27
RNU6-28P-201ENST00000362378 LIMD2Q9BT23 127 aa0.87□□□□□ -2.27
RNU6-28P-201ENST00000362378 FKBP11Q9NYL4 201 aa0.87□□□□□ -2.27
RNU6-28P-201ENST00000362378 CNTRLQ7Z7A1 2325 aa0.87□□□□□ -2.27
RNU6-28P-201ENST00000362378 FER1L6Q2WGJ9 1857 aa0.86□□□□□ -2.27
RNU6-28P-201ENST00000362378 MED23Q9ULK4 1368 aa0.86□□□□□ -2.27
RNU6-28P-201ENST00000362378 A0A1B0GX51 115 aa0.86□□□□□ -2.27
RNU6-28P-201ENST00000362378 A0A1W2PPM0 123 aa0.86□□□□□ -2.27
RNU6-28P-201ENST00000362378 PDE6GP18545 87 aa0.86□□□□□ -2.27
RNU6-28P-201ENST00000362378 CCSMST1Q4G0I0 132 aa0.86□□□□□ -2.27
RNU6-28P-201ENST00000362378 BRK1Q8WUW1 75 aa0.86□□□□□ -2.27
RNU6-28P-201ENST00000362378 MPC1Q9Y5U8 109 aa0.86□□□□□ -2.27
RNU6-28P-201ENST00000362378 OVOS2A0A0G2JMS6 1433 aa0.86□□□□□ -2.27
RNU6-28P-201ENST00000362378 CHD3Q12873 2000 aaKnown RBP0.86□□□□□ -2.27
RNU6-28P-201ENST00000362378 TET1Q8NFU7 2136 aa0.85□□□□□ -2.27
RNU6-28P-201ENST00000362378 TRAV36DV7A0A075B6V5 113 aa0.85□□□□□ -2.27
RNU6-28P-201ENST00000362378 A6NN06 94 aa0.85□□□□□ -2.27
RNU6-28P-201ENST00000362378 M0QZK8 103 aa0.85□□□□□ -2.27
RNU6-28P-201ENST00000362378 SLC25A4P12235 298 aa0.85□□□□□ -2.27
RNU6-28P-201ENST00000362378 BLCAPP62952 87 aa0.85□□□□□ -2.27
RNU6-28P-201ENST00000362378 NEDD8Q15843 81 aa0.85□□□□□ -2.27
RNU6-28P-201ENST00000362378 OCIAD2Q56VL3 154 aa0.85□□□□□ -2.27
RNU6-28P-201ENST00000362378 LPAR5Q9H1C0 372 aa0.85□□□□□ -2.27
RNU6-28P-201ENST00000362378 SPANXA1Q9NS26 97 aa0.85□□□□□ -2.27
RNU6-28P-201ENST00000362378 FGD6Q6ZV73 1430 aa0.84□□□□□ -2.27
RNU6-28P-201ENST00000362378 UQCRQO14949 82 aa0.84□□□□□ -2.27
RNU6-28P-201ENST00000362378 IGHV3-30P01768 117 aa0.84□□□□□ -2.27
RNU6-28P-201ENST00000362378 HBDP02042 147 aa0.84□□□□□ -2.27
RNU6-28P-201ENST00000362378 IGHV3-30-5P0DP03 117 aa0.84□□□□□ -2.27
RNU6-28P-201ENST00000362378 LSM3P62310 102 aaKnown RBP0.84□□□□□ -2.27
RNU6-28P-201ENST00000362378 OR8B8Q15620 311 aa0.84□□□□□ -2.27
RNU6-28P-201ENST00000362378 Q5XG85 94 aa0.84□□□□□ -2.27
RNU6-28P-201ENST00000362378 OR8I2Q8N0Y5 310 aa0.84□□□□□ -2.27
RNU6-28P-201ENST00000362378 C5orf17Q8NAS9 161 aa0.84□□□□□ -2.27
RNU6-28P-201ENST00000362378 BOKQ9UMX3 212 aaPredicted RBP0.84□□□□□ -2.27
RNU6-28P-201ENST00000362378 KIAA1549LQ6ZVL6 1849 aa0.84□□□□□ -2.28
RNU6-28P-201ENST00000362378 DSPPQ9NZW4 1301 aa0.84□□□□□ -2.28
RNU6-28P-201ENST00000362378 EML5Q05BV3 1969 aa0.83□□□□□ -2.28
RNU6-28P-201ENST00000362378 IFITM5A6NNB3 132 aa0.83□□□□□ -2.28
RNU6-28P-201ENST00000362378 DEGS1O15121 323 aa0.83□□□□□ -2.28
RNU6-28P-201ENST00000362378 DPM2O94777 84 aa0.83□□□□□ -2.28
RNU6-28P-201ENST00000362378 ETV6P41212 452 aa0.83□□□□□ -2.28
RNU6-28P-201ENST00000362378 FXYD4P59646 89 aa0.83□□□□□ -2.28
RNU6-28P-201ENST00000362378 DNAJB13P59910 316 aa0.83□□□□□ -2.28
RNU6-28P-201ENST00000362378 ASB16-AS1Q495Z4 193 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms